prot_P-littoralis_Contig12.45.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig12.45.1
Unique Nameprot_P-littoralis_Contig12.45.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length289
Homology
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BLAST of mRNA_P-littoralis_Contig12.45.1 vs. uniprot
Match: D8LAU9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU9_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 7.160e-86
Identity = 170/305 (55.74%), Postives = 192/305 (62.95%), Query Frame = 0 
Query:   19 MRFQVTSFSYPPRSHAPPSRPRP----------LRVGAWSSSP--------TSTRRPCPRHHPSCRSYSALFSSVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGGAMESEPRAGEQV-------------PVVEEGAAAVAGE----EQVDWDKAWASTRQKMEQEKRAAPAFSGRTQIVATKNDEGGYDYEEIAADGSRTMSGSKGSGAFGFADSGQVEEDGPGSIRRKEQEAVNLATTNQAFAGLFAVLIASLIFEVYIYMSGGISNGSTRFQNIGQPTTYDALPMPATPSLDDDLTV 288
            M FQ T+FS P R++ P  RP            L VG W SSP        +S RRP   H P    Y++LF S D+                              DGGA    PRA EQ+             P   EG AA AGE    EQVDWDKAWASTRQ+ME+EKRAAPAFSGR Q+VATKN++GGYD+EEI+ADGS  M G KG G FGFADS QVE DGPG IRRKEQEAVN ATTNQAFAGLFA+L+ASLIFEVY+YMSGGI+NGSTRFQ++GQPTTYDALP+PATP  D DL V
Sbjct:    1 MGFQATAFSSPIRANKPLQRPXXXXXXXXXXXXLGVGGWLSSPPRAISRTSSSRRRP---HRP----YASLFDSGDENNARDDSPNPGNADSQGEAPESESAPSSP-DGGAKPV-PRADEQLTGSLADAGATGEGPPQAEGEAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGFADSNQVE-DGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALPLPATPPTDSDLVV 295
[Close]
BLAST of mRNA_P-littoralis_Contig12.45.1 vs. uniprot
Match: A0A836C767_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C767_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.460e-11
Identity = 56/171 (32.75%), Postives = 85/171 (49.71%), Query Frame = 0 
Query:  138 VDWDKAWASTRQKM-------EQEKRAA----------PAFSGRTQIVATKNDEGGYDYEEIAADGSRTMSGSKGSGAFGFADSGQVEEDGPGSIRRKEQEAVNLATTNQAFAGLFAVLIASLIFEVYIYMSGGISNGSTRFQNIGQPTTY--DALPMPATPSL-DDDLTV 288
            VDWD AWA+ +++M       +   RA           PAF+GR +I+ T N E GY Y EI A G  + +G +  G F   +     +D    I  KE++ V     +Q F    A++   L F + + M+GGIS+G++RF+++  P      A+P P+     DDDL V
Sbjct:  115 VDWDGAWAAKQKEMGNGDSGSDDSARAVEPXXXXXVSRPAFAGRKEIIVTGNKEEGYTYTEIDASGRVSRAG-EADGGFRLDEDSPQLKDARRRIIEKEEQLVEAVAFDQVFVVGGALIAVLLAFMINVGMTGGISDGASRFRDVELPVNGVPPAVPHPSNQVYPDDDLVV 284
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.45.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAU9_ECTSI7.160e-8655.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C767_9STRA2.460e-1132.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:220689..222509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.45.1mRNA_P-littoralis_Contig12.45.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig12 220673..223463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig12.45.1 ID=prot_P-littoralis_Contig12.45.1|Name=mRNA_P-littoralis_Contig12.45.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=289bp
MGAMAFLQSHAGVGFQTGMRFQVTSFSYPPRSHAPPSRPRPLRVGAWSSS
PTSTRRPCPRHHPSCRSYSALFSSVDDDSGDDGNASNTPGGQKTPDDDDD
AAVGGTSDGGAMESEPRAGEQVPVVEEGAAAVAGEEQVDWDKAWASTRQK
MEQEKRAAPAFSGRTQIVATKNDEGGYDYEEIAADGSRTMSGSKGSGAFG
FADSGQVEEDGPGSIRRKEQEAVNLATTNQAFAGLFAVLIASLIFEVYIY
MSGGISNGSTRFQNIGQPTTYDALPMPATPSLDDDLTV*
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