prot_P-littoralis_Contig802.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig802.6.1
Unique Nameprot_P-littoralis_Contig802.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length507
Homology
BLAST of mRNA_P-littoralis_Contig802.6.1 vs. uniprot
Match: D8LMJ3_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ3_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.830e-29
Identity = 134/367 (36.51%), Postives = 171/367 (46.59%), Query Frame = 0
Query:   15 GVMKMLRNVSASVHQRVSQLKNSLIPSGKERLHSWNEAREISIVIARSLVEFPLSEAAAQEGTAAAIGCHPPQIPAQLKAAGSRGVSFMRQLATGRPTFRGPKGATGRTHHLTSAAVEARGDVGKISVDGAVYDRDNNSSNNYNRGKSRYGGNTRSSNSDGPRSSTAPGDRYDGDSSWVSGDEILRTLGGGYLAVTALCTLSRAVALQGMMKQAADASKVAPSSNNNSSNGH-------DDYDEAFGHFGATQEVIELVSLLASLFRLGSPTSQVTMAGGEKESQSQLSPVPSLAAAAAGAGVDGTSITGLPPTQAEVEDALAAGQCTALFRRGFSTDMPHSTLLPLPQYWSRGSFFGGATRGKPGG 374
            GV + LR+   SV Q VS L  SL  SG ER  SWNEAR++SI IAR LVEFPLS AAA   ++AA G        Q      + V  +R    G P      G +G  H+    A        +  V          S   +   KS          S    S   PG+ Y G   W  GDE+LRT+GGG+L +  L TLSRA+      + AA A      S   +++ H       +D  E FG +  +QEV +L+ LLA+LFRLGSP SQV   G    +  ++SP     A A G G        LPPT  EVE ALAAG+ TA  RR  S  +      P  Q  S+ +  GG  +G+ GG
Sbjct: 1171 GVGEALRSSMTSVRQWVSNLTGSLTSSGTERRQSWNEARKLSIKIARVLVEFPLSPAAADGDSSAAAG--------QENNTAHQKVEQLRVARFGGPI----NGRSGHHHYHDQGAAANTNTATRAPVAPGGTTNPTTSKVQHRNRKS----------SGACLSPAEPGNGYGG--WWGEGDEVLRTMGGGFLTIACLSTLSRAIPSPAT-RPAAGAPSTPHGSGTFTNHHHKLPHHHSNDVKEVFGQYEVSQEVSDLLLLLAALFRLGSPPSQVP--GMISATLGRVSPSSPTTAPAPGGGAVNEV---LPPTVTEVEAALAAGKATASRRRRSSFAVAPPLSRPAQQDRSKSARTGGV-KGRLGG 1506          
BLAST of mRNA_P-littoralis_Contig802.6.1 vs. uniprot
Match: A0A6H5KA16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA16_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.040e-8
Identity = 80/233 (34.33%), Postives = 107/233 (45.92%), Query Frame = 0
Query:   59 IARSLVEFPLSEAAAQEGTAAAIGCHPPQIPAQLKAAGSRGVSFMRQLATGRPTFRG--PKGATGRTHHLTSAAVEARGDVGKISVDGAVYDRDNNSSNNYNRGKSRYGGNTRSSNSDGPRSSTA-PGDRYDGDSSWVSGDEILRTLGGGYLAVTALCTLSRAVALQGMMKQAAD-----ASKVAPSSNNNSSNGHD-DYDEAFGHFGATQEVIELVSLLASLFRLGSPTSQV 282
            +A+ LVEFPLS AAA   + AA G       A  K    R   F   +  GRP       +GA   T+  T A V   G   + +    V  R+ NSS                    G  SS A P + Y G   W  GD++LRT+GGG+L +  L TLSRA++       A        S    +  + S + H+ D  + FG +  +QEV +L+ LLA+LFRLGSP SQV
Sbjct:   18 VAQVLVEFPLSPAAADGDSFAAAGQE--NNTAHPKVEQVRAARFGGPM-NGRPGHHHYCDQGAAANTNTATRAPVAPGGTTNRTTS--KVQQRNRNSS--------------------GACSSPAGPDNGYGG--WWGEGDKVLRTMGGGFLTIACLSTLSRAISSPATRPVAGTPPTPHGSGTFTNHPHKSPHHHNNDVKDVFGQYEVSQEVSDLLLLLAALFRLGSPPSQV 223          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig802.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMJ3_ECTSI2.830e-2936.51Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KA16_9PHAE1.040e-834.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..488
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig802contigP-littoralis_Contig802:25344..29143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig802.6.1mRNA_P-littoralis_Contig802.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig802 25344..29143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig802.6.1 ID=prot_P-littoralis_Contig802.6.1|Name=mRNA_P-littoralis_Contig802.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=507bp
QRPRSFQEPSRDSSGVMKMLRNVSASVHQRVSQLKNSLIPSGKERLHSWN
EAREISIVIARSLVEFPLSEAAAQEGTAAAIGCHPPQIPAQLKAAGSRGV
SFMRQLATGRPTFRGPKGATGRTHHLTSAAVEARGDVGKISVDGAVYDRD
NNSSNNYNRGKSRYGGNTRSSNSDGPRSSTAPGDRYDGDSSWVSGDEILR
TLGGGYLAVTALCTLSRAVALQGMMKQAADASKVAPSSNNNSSNGHDDYD
EAFGHFGATQEVIELVSLLASLFRLGSPTSQVTMAGGEKESQSQLSPVPS
LAAAAAGAGVDGTSITGLPPTQAEVEDALAAGQCTALFRRGFSTDMPHST
LLPLPQYWSRGSFFGGATRGKPGGRGQGPGNGQAAADHHLPTPTQNRHVP
YTIENHCHTNPNNNERESRPRERESWPNPALPQALPHESSGGRRTATNTP
QLVVAAPRSAATLPLSSGRQKLAGAPQESETSLTAGLERMHRQFSAFHVH
STPDKAP
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