mRNA_P-littoralis_Contig12.43.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig12.43.1
Unique NamemRNA_P-littoralis_Contig12.43.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: A0A6H5JPJ5_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPJ5_9PHAE)

HSP 1 Score: 914 bits (2363), Expect = 0.000e+0
Identity = 664/941 (70.56%), Postives = 699/941 (74.28%), Query Frame = 2 
Query:  209 SEGRRTQRAAAAKATDRGKRIAEMILECDEDGEQGGDDPXXXXXXXXXXXXXTSGSGDGAGELADEEDDGAGSNGS---LYRRKPIKTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGTKGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFARTDLDPNSPEFEGRGFKNTIDIALAAVRGRITVSNPNEPATRRGRPPRKRIEVEEGSAPAASSKGGKASSTSKSQAXXXXXXXXXXXXRAQAXXXXXXXXXXXXXXXSRAAAVDRH-----------------PPAARAGGSGNTGNKDSRRGRPEPAVKKPDREPRSRQXXXXXXXXXXXXXXXMRRGNGGRDAWRQSRNGRRYADRGGDGIERPSRSTSSARSDDSFVGGQALASWNPLTPTDRRLRALGPSP-GVMTGLSKRIHDVSFKDRGSASPSLHSFFPNTPGGTGMSQYSSLNDTHSPGSLITGSV-TDVTLPVWDTPKNKRRPLITPGGIGRLNGRFTGGXXXXXXXXXXXXXXXXXXXPAAETPDMSPLWGGRHNGASPALSAITAADISPYHVEDATLHTPGGGRRGGRHVLAVDE-TREEEMDISSAARDLREFKAGAGGARAPSWADTGSGRAGGLKAGRSKGESFSGSVSQLTTNRMFASGAAIIGGSPMQDSPSYHMMAGCESDGGISDNDHSFLPKRKLAELATTPNSRSSGGADVDGFFASGSSPEDGSGGVSGGYKARDARAGGXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------LLAVRSSDGPKRTGGIGRDAGSPPAPANMSLMDFCRSSPSTTLMS 2902
            SEGRR QRAAAAKA DR KR+AEMILEC+E GE G D+ XXXXXXXXXXXXX                           LYRRKPIKTRWSAAED QLKKLVD++GSGNWRVVA+ IPGKTDMQCFHRWTKVFNGGTKGPWS EDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFARTDL P+SPEFEG GFKN IDIALAAVRGRITVSNPNEPATRRGRPPRKRIEV+ G A  A+SK  + ++ SK QA XXXXXXXXXXX    XXXXXXXXXXXXXXX                          P     G  G+                    +PR    XXXXXXXXXXXXXX       R   +                  PSR    A S++SF  GQA A W PLTP D+RLRA G SP GVMTGLSKRIHDVSFKDRGSASPSLHSFFPNTPGGTGMSQYSSLNDTHSP +LIT +  TDVTLP WDTPKN R     PGGI   +G    GXXXXXXXXX          PAA+TPD+SPLW GRHNGASPALSAITAADISPYHVEDATL TPGGGRRG          TR+E MDISSAARDLREFKA AGG RAP  A+ G GR+GG++ GR KG   S S SQ TTNRMF  G + IGGSP +DSPSYHMMAGCESDG +SDND SFLPKRKL +LA TPNSRSSGG DVDGFFASGSSPEDGSGGVSGGY+ RDARAG XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    LLAVRSSDGPKRTGGIGRDAGSPPAPA +SLMDFCRSSP+TTLMS
Sbjct:   32 SEGRRIQRAAAAKAVDRSKRVAEMILECNEGGEIGNDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLYRRKPIKTRWSAAEDAQLKKLVDSNGSGNWRVVADSIPGKTDMQCFHRWTKVFNGGTKGPWSPEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFARTDLTPSSPEFEGHGFKNVIDIALAAVRGRITVSNPNEPATRRGRPPRKRIEVD-GVAQPATSKSRQPANASKPQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVGTIGEPGSASR-----------XXXXXXQPRQADSXXXXXXXXXXXXXXXXXXXXVRGPRKXXXXXXXXXXXXXXXXXHPSRXXXXAESEESFADGQARAGWEPLTP-DKRLRAAGSSPMGVMTGLSKRIHDVSFKDRGSASPSLHSFFPNTPGGTGMSQYSSLNDTHSPAALITAAAATDVTLPAWDTPKNIR---WQPGGIRGFHGGPASGXXXXXXXXX----------PAADTPDVSPLWDGRHNGASPALSAITAADISPYHVEDATLRTPGGGRRGXXXXXXXXXXTRDEFMDISSAARDLREFKASAGGNRAPLSAEAGRGRSGGVQTGRGKGSPRSRS-SQSTTNRMFGPGGSNIGGSPAEDSPSYHMMAGCESDGCMSDNDQSFLPKRKLDQLAATPNSRSSGGGDVDGFFASGSSPEDGSGGVSGGYQVRDARAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLAVRSSDGPKRTGGIGRDAGSPPAPATLSLMDFCRSSPATTLMS 945
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: A0A7S2WMH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMH6_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.060e-63
Identity = 102/164 (62.20%), Postives = 120/164 (73.17%), Query Frame = 2 
Query:  443 RRKPIKTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGG-TKGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFA 931
            +RK    RW+  ED +LK  V  +G+ NW+ +AE  P +T++QC HRW KV N    KGPW+AE+DA+V ELV   G KKW+ IA  LPGR GKQCRERWHNHLNP ISK+ WSE ED  IL  H+KLGN+WAEIAK +PGRTDNAIKNHWNSSMKRK E   A
Sbjct:   28 KRKSCNRRWTTEEDEKLKIAVARNGAKNWKKIAEAFPDRTEVQCLHRWQKVLNPELVKGPWTAEEDAKVIELVKLHGPKKWTMIADCLPGRIGKQCRERWHNHLNPKISKLAWSEDEDRVILEAHEKLGNRWAEIAKRLPGRTDNAIKNHWNSSMKRKIEKFLA 191
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: A0A1E7FEX6_9STRA (Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEX6_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.190e-62
Identity = 95/153 (62.09%), Postives = 117/153 (76.47%), Query Frame = 2 
Query:  464 RWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGG-TKGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAE 919
            +W+  ED  LK+ V+ HG+ NW++++  +PG++++QC HRW KV      KGPW+AE+D +V ELV + GAKKWS IA  LPGR GKQCRERWHNHLNP ISK  W E ED TIL  H  LGN+WAEIAK++PGRTDNAIKNHWNSSM+RK E
Sbjct:   26 KWTKHEDETLKEAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLVKGPWTAEEDRKVVELVKKHGAKKWSLIATNLPGRIGKQCRERWHNHLNPDISKEAWKEDEDRTILESHITLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIE 178
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: UPI001130B304 (transcriptional activator Myb-like isoform X1 n=2 Tax=Salmo trutta TaxID=8032 RepID=UPI001130B304)

HSP 1 Score: 226 bits (575), Expect = 5.190e-62
Identity = 99/160 (61.88%), Postives = 121/160 (75.62%), Query Frame = 2 
Query:  443 RRKPIKTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGT-KGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAE 919
            +R   KTRW+  ED +LKKLV+ HGS +W+++A  +P +TDMQC HRW KV N    KGPW+ E+D RV ELV + GAK+WS IA  L GR GKQCRERWHNHLNP + K  W+E ED  I   H+KLGN+WAEIAK++PGRTDNAIKNHWNS+M+RK E
Sbjct:   74 KRHQGKTRWTREEDEKLKKLVEHHGSSDWKLIASFLPNRTDMQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDQIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 233
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: A0A8C5GCP7_9TELE (MYB proto-oncogene, transcription factor n=2 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5GCP7_9TELE)

HSP 1 Score: 227 bits (578), Expect = 7.170e-62
Identity = 111/208 (53.37%), Postives = 140/208 (67.31%), Query Frame = 2 
Query:  392 ELADEEDDGAGSNGSLYRRKPIKTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGT-KGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFARTDLDP--NSPEFEGRGFKNTIDIALA 1006
            EL + + DGA   G   +R+  KTRW+  ED +LKKLV+ HGS +W+V+A  +P +TDMQC HRW KV N    KGPW+ E+D RV ELV + GAK+WS IA  L GR GKQCRERWHNHLNP + K  W+E ED  I   H++LGN+WAEIAK++PGRTDNAIKNHWNS+M+RK E      +L    N+      GF  T +  +A
Sbjct:   29 ELYEPDYDGAVIKGG--KRQLGKTRWTREEDEKLKKLVEHHGSEDWKVIASLLPNRTDMQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHERLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQNLPKISNTSHSGSHGFVKTANHIMA 234
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: A0A1S3M7Z6_SALSA (transcriptional activator Myb-like n=1 Tax=Salmo salar TaxID=8030 RepID=A0A1S3M7Z6_SALSA)

HSP 1 Score: 224 bits (570), Expect = 8.350e-62
Identity = 98/160 (61.25%), Postives = 120/160 (75.00%), Query Frame = 2 
Query:  443 RRKPIKTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGT-KGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAE 919
            +R   KTRW+  ED +LKKLV+ HG  +W+++A  +P +TDMQC HRW KV N    KGPW+ E+D RV ELV + GAK+WS IA  L GR GKQCRERWHNHLNP + K  W+E ED  I   H+KLGN+WAEIAK++PGRTDNAIKNHWNS+M+RK E
Sbjct:   74 KRHQGKTRWTREEDEKLKKLVEHHGCSDWKLIASFLPNRTDMQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDQIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 233
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: UPI0011300583 (transcriptional activator Myb n=1 Tax=Salmo trutta TaxID=8032 RepID=UPI0011300583)

HSP 1 Score: 224 bits (570), Expect = 8.350e-62
Identity = 98/155 (63.23%), Postives = 119/155 (76.77%), Query Frame = 2 
Query:  458 KTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGT-KGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAE 919
            KTRW+  ED +LKKLV+ HGS +W+V+A  +P +TD+QC HRW KV N    KGPW+ E+D RV ELV + GAK+WS IA  L GR GKQCRERWHNHLNP + K  W+E ED  I   H+KLGN+WAEIAK++PGRTDNAIKNHWNS+M+RK E
Sbjct:   40 KTRWTREEDEKLKKLVEHHGSEDWKVIASFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDQIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: A0A3B4AYS5_9GOBI (V-myb avian myeloblastosis viral oncogene homolog n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4AYS5_9GOBI)

HSP 1 Score: 223 bits (568), Expect = 9.970e-62
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 2 
Query:  407 EDDGAGSNGSLYRRKPIKTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGT-KGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAE 919
            E D  GS     +R   KTRW+  ED +LKKLVD HGS +W+++A  +  +TD+QC HRW KV N    KGPW+ E+D RV ELV + GAK+WS IA  L GR GKQCRERWHNHLNP + K  W+E ED  I   H+KLGN+WAEIAK++PGRTDNAIKNHWNS+M+RK E
Sbjct:   23 EHDYDGSMAKTGKRHLGKTRWTREEDEKLKKLVDLHGSDDWKLIASLLTNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: A0A3B4B0T1_9GOBI (V-myb avian myeloblastosis viral oncogene homolog n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4B0T1_9GOBI)

HSP 1 Score: 223 bits (568), Expect = 1.580e-61
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 2 
Query:  407 EDDGAGSNGSLYRRKPIKTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGT-KGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAE 919
            E D  GS     +R   KTRW+  ED +LKKLVD HGS +W+++A  +  +TD+QC HRW KV N    KGPW+ E+D RV ELV + GAK+WS IA  L GR GKQCRERWHNHLNP + K  W+E ED  I   H+KLGN+WAEIAK++PGRTDNAIKNHWNS+M+RK E
Sbjct:   23 EHDYDGSMAKTGKRHLGKTRWTREEDEKLKKLVDLHGSDDWKLIASLLTNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
[Close]
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Match: A0A0S7GPH4_9TELE (MYB (Fragment) n=4 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7GPH4_9TELE)

HSP 1 Score: 222 bits (565), Expect = 1.780e-61
Identity = 105/203 (51.72%), Postives = 135/203 (66.50%), Query Frame = 2 
Query:  407 EDDGAGSNGSLYRRKPIKTRWSAAEDTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGT-KGPWSAEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEI--VFARTDLDPNSPEFEGRGFKNTIDIALA 1006
            E D  G+   + +R   KTRW+  ED +LKKLV+ HGS +W+++A  +  +TD+QC HRW KV N    KGPW+ E+D RV ELV + GAK+WS IA  L GR GKQCRERWHNHLNP + K  W+E ED  I   H+KLGN+WAEIAK++PGRTDNAIKNHWNS+M+RK E       T  + NS      G+  T +  ++
Sbjct:   23 EHDYDGTLAKVGKRHLGKTRWTREEDEKLKKLVELHGSEDWKLIASLLANRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQNTSKNSNSSLSMSHGYIKTTNHVMS 225
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.43.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPJ5_9PHAE0.000e+070.56MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A7S2WMH6_9STRA2.060e-6362.20Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1E7FEX6_9STRA2.190e-6262.09Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fr... [more]
UPI001130B3045.190e-6261.88transcriptional activator Myb-like isoform X1 n=2 ... [more]
A0A8C5GCP7_9TELE7.170e-6253.37MYB proto-oncogene, transcription factor n=2 Tax=G... [more]
A0A1S3M7Z6_SALSA8.350e-6261.25transcriptional activator Myb-like n=1 Tax=Salmo s... [more]
UPI00113005838.350e-6263.23transcriptional activator Myb n=1 Tax=Salmo trutta... [more]
A0A3B4AYS5_9GOBI9.970e-6259.30V-myb avian myeloblastosis viral oncogene homolog ... [more]
A0A3B4B0T1_9GOBI1.580e-6159.30V-myb avian myeloblastosis viral oncogene homolog ... [more]
A0A0S7GPH4_9TELE1.780e-6151.72MYB (Fragment) n=4 Tax=Poeciliinae TaxID=586240 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:208435..218060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LAU7
PFAMsMyb_DNA-binding
Model size2917
Max annot lvl2759|Eukaryota
KEGG koko:K09420
KEGG Pathwayko04151,ko05166,map04151,map05166
Hectar predicted targeting categoryother localisation
Exons10
Evalue7.85e-288
EggNOG OGsCOG5147@1|root,KOG0048@2759|Eukaryota
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-27_006330.1
DescriptionRNA polymerase II transcription regulator recruiting activity
Cds size2886
COG categoryADK
BRITEko00000,ko00001,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.43.1prot_P-littoralis_Contig12.43.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig12 208435..218029 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789506.5383832-CDS-P-littoralis_Contig12:208434..2085491680789506.5383832-CDS-P-littoralis_Contig12:208434..208549Pylaiella littoralis U1_48CDSP-littoralis_Contig12 208435..208549 -
1680789506.5510101-CDS-P-littoralis_Contig12:208844..2092141680789506.5510101-CDS-P-littoralis_Contig12:208844..209214Pylaiella littoralis U1_48CDSP-littoralis_Contig12 208845..209214 -
1680789506.559984-CDS-P-littoralis_Contig12:209546..2096751680789506.559984-CDS-P-littoralis_Contig12:209546..209675Pylaiella littoralis U1_48CDSP-littoralis_Contig12 209547..209675 -
1680789506.5707824-CDS-P-littoralis_Contig12:209989..2105111680789506.5707824-CDS-P-littoralis_Contig12:209989..210511Pylaiella littoralis U1_48CDSP-littoralis_Contig12 209990..210511 -
1680789506.5810053-CDS-P-littoralis_Contig12:211929..2120631680789506.5810053-CDS-P-littoralis_Contig12:211929..212063Pylaiella littoralis U1_48CDSP-littoralis_Contig12 211930..212063 -
1680789506.595333-CDS-P-littoralis_Contig12:212430..2126871680789506.595333-CDS-P-littoralis_Contig12:212430..212687Pylaiella littoralis U1_48CDSP-littoralis_Contig12 212431..212687 -
1680789506.6053872-CDS-P-littoralis_Contig12:212816..2131451680789506.6053872-CDS-P-littoralis_Contig12:212816..213145Pylaiella littoralis U1_48CDSP-littoralis_Contig12 212817..213145 -
1680789506.6137958-CDS-P-littoralis_Contig12:213535..2138061680789506.6137958-CDS-P-littoralis_Contig12:213535..213806Pylaiella littoralis U1_48CDSP-littoralis_Contig12 213536..213806 -
1680789506.6235106-CDS-P-littoralis_Contig12:214545..2148001680789506.6235106-CDS-P-littoralis_Contig12:214545..214800Pylaiella littoralis U1_48CDSP-littoralis_Contig12 214546..214800 -
1680789506.6354246-CDS-P-littoralis_Contig12:217525..2180291680789506.6354246-CDS-P-littoralis_Contig12:217525..218029Pylaiella littoralis U1_48CDSP-littoralis_Contig12 217526..218029 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789506.6468759-UTR-P-littoralis_Contig12:218029..2180601680789506.6468759-UTR-P-littoralis_Contig12:218029..218060Pylaiella littoralis U1_48UTRP-littoralis_Contig12 218030..218060 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig12.43.1

>prot_P-littoralis_Contig12.43.1 ID=prot_P-littoralis_Contig12.43.1|Name=mRNA_P-littoralis_Contig12.43.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=962bp
MQPDEEQQLDVGNNNSNGDADADALTGSSFGEQRENQKMEQEQEQEQERQ
EEHPAAAGGSEGRRTQRAAAAKATDRGKRIAEMILECDEDGEQGGDDPEA
EEEEASGGNEETSGSGDGAGELADEEDDGAGSNGSLYRRKPIKTRWSAAE
DTQLKKLVDTHGSGNWRVVAEGIPGKTDMQCFHRWTKVFNGGTKGPWSAE
DDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWS
EHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFA
RTDLDPNSPEFEGRGFKNTIDIALAAVRGRITVSNPNEPATRRGRPPRKR
IEVEEGSAPAASSKGGKASSTSKSQATAAGSSAASSSARAQAAGSAPSAR
AQAAVSASRAAAVDRHPPAARAGGSGNTGNKDSRRGRPEPAVKKPDREPR
SRQEEEEEEEEEEEEEEEMRRGNGGRDAWRQSRNGRRYADRGGDGIERPS
RSTSSARSDDSFVGGQALASWNPLTPTDRRLRALGPSPGVMTGLSKRIHD
VSFKDRGSASPSLHSFFPNTPGGTGMSQYSSLNDTHSPGSLITGSVTDVT
LPVWDTPKNKRRPLITPGGIGRLNGRFTGGGGGGGGSGSGGGGGGGGGGP
AAETPDMSPLWGGRHNGASPALSAITAADISPYHVEDATLHTPGGGRRGG
RHVLAVDETREEEMDISSAARDLREFKAGAGGARAPSWADTGSGRAGGLK
AGRSKGESFSGSVSQLTTNRMFASGAAIIGGSPMQDSPSYHMMAGCESDG
GISDNDHSFLPKRKLAELATTPNSRSSGGADVDGFFASGSSPEDGSGGVS
GGYKARDARAGGGAALTPVVKRRAILYDRSPHENNHHAAALNNTNDSSFV
DTEAAAAAAASALLAVRSSDGPKRTGGIGRDAGSPPAPANMSLMDFCRSS
PSTTLMSQTFH*
back to top

mRNA from alignment at P-littoralis_Contig12:208435..218060-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig12.43.1 ID=mRNA_P-littoralis_Contig12.43.1|Name=mRNA_P-littoralis_Contig12.43.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9626bp|location=Sequence derived from alignment at P-littoralis_Contig12:208435..218060- (Pylaiella littoralis U1_48)
CTAATCGAAGTTCCGCGCAAGCTACCAAACAATGCAACCCGATGAGGAGC
AGCAACTGGACGTGGGCAACAACAACAGCAACGGTGATGCGGACGCGGAC
GCCTTGACCGGCAGTTCTTTCGGTGAACAACGGGAGAACCAGAAGATGGA
GCAGGAGCAGGAGCAGGAGCAGGAGCGGCAGGAGGAGCACCCGGCTGCCG
CGGGGGGGAGCGAGGGACGCAGAACCCAGCGGGCGGCGGCGGCCAAGGCC
ACGGACCGCGGCAAGCGGATCGCCGAGATGATCCTCGAGTGCGACGAGGA
CGGAGAGCAGGGCGGGGATGACCCTGAGGCGGAGGAGGAGGAGGCTTCGG
GCGGAAACGAGGAGACGAGCGGCAGCGGTGACGGCGCTGGCGAGCTGGCG
GATGAGGAGGACGACGGGGCCGGAAGCAACGGCTCCCTCTACCGCCGGAA
GCCGATCAAGACGAGGTGGTCTGCGGCGGAAGACACCCAGCTGAAGAAGC
TCGTGGACACCCACGGCTCGGGGAACTGGAGAGTGGTGAGTGTGGCAGTG
TGGCGGATGAAAGGCCGGGGTACTCCTCTTGTATCCATATCTATGATAAC
AAGCACCGGGTTTGTGAAATGCGAAATGTGAAATGTTTTGCTGTCGACAT
GAAAAAGTAAAAATCTTTGTGTTGTGCATATCATATCATTACTGCTGTAC
AGCAGACAGGAATACCTGTACTACTGCTGTACATCTTCTGTATCACAGCG
CTCCTCAAGCCAAAGCAGTACTACTGGCAAACCGTTTGTTGTTTTCTCCG
ATTGTAATACTCTGTACCACGCTGGTGAACACGCACTGACTACTGCTGTT
GTACGAAAGGTTAATGTTTTGTACCAGTATTTAAGGAAGATACTGCTGCT
GCTGTGTATTTTTTTTTTTCATTTTACTATTTCAGCGCGACATTCACATT
GTAAATCACACATGCTCAGATGCGTCACAAGTACACCTACCGGTAGATTC
CCACCACCCACGAGAACCCCCTGGGAAAATGGGGTAACGAACAACTTCCA
CGTTGTATCCTACCGTTGACCTCGGGAAAACACACACTACTCGTATATAA
AGTGGACGTATCATATGCCACTTACACAGCAGTGAGTCACGTGATGCGAC
CGAGGTATTTCACCCACGTCTTGATTGTGTGTGAAGACACAGCAGGAGTG
CGTTGATGGAAATCTGCTCGCTTCCTCCCTCTTGACTGCGGGTTTCATTT
CACTTTTGTTGTTTTTTCATCAAAGGCGTGACCAGCAGGCGATTATCCCA
AACGTGTCGGTTAGTTTTTTTTATTTTCCTTTTTTTGTGTTTTTCGATTG
TCTTGTTGAACCTGATAACCACAGAGGGGAGCTGCGATTTGCTGTTGCGC
ACGGCTGTCTGAATCTGATGAGGTTTATGAGCGCTGCTGTTGTAGACCTT
CGTCTACTAGAAAAGAGAGACTTTCTGCTCGTACCTTGGTTTCTTGAAAC
TTCGAACGAAAAAAATTAAAAATGTTACTACAGAAGTTGTATTTATACTT
CGGACTTCGACACACACACACATACACACATACACACGCACACTTAGTAC
TCCATATTTCGTCTTATACGGAGTATCATATTTCGAGATACGTGCTCCTT
CTCTGCCAGTTGCATTATGTTTCTTTCATGTTTGATGCGCCTACAAGCAG
GGAGAGTGCCCGCCCCCATAGCCTCCGGTCTTCGGTTTTGCCTTTTGTGG
TACAGCACGAAAAGGATTTTGCAGCAATGTATCATACTCCGGAGTACATA
GCTGCAACATACACGTAGCCTCTATCATTGTCGTTGCGCGGGCAAATTTA
TAGAACGTATGATGTGATACCCCCGACAGACTGCCCTCGCCTGAAACGGG
CGTGCGGTTGCTTGTAAAACATTATGTATCATACATACAAACAAAAACGA
TGTGCAGCCGCCTGCTGTGTACAGCAGCACAGCAAAGAAGCGTCGTATCA
AAATTCTACCGCGATCGACGTAACTCGATCCCGCCGTCACGAATATTGTT
TTTTCACTTTACCAAATCACAAATTACAAATTACGGAAATTGTATTGGAC
GGATCATATGATATGATATGTTTGACGTCGTGCGTTAGACGTTAAAAAAG
TTGTCCCTTGTCTGAACGGATGAATCACACCTCTAGCCTCATCATATCAT
ACAAACTTCGATAGGAACACGGGGTTCAGATACCTGTCAGTTGGACCGAG
ACCCTGTGGATATACCGCCCATGGGCGCAGGGTCGCACAGCCTGACACCC
GTCTCTCTCGTGCCATCATGAGACAAAGACGTTGTGGTACCGCCGTGGCA
CATAATATTCGGCATCCTTTTTGCCAAGGAGGCAATACACACACTATTTG
CTCTGTGTACTTGTAATGCATTGAACAATGAGTCGCCACAACCTGACACC
AGTACAAAATGCTTGTGAGCGTGCAGGGGACCCCGATCTGGGAATCTAAA
GCCCTGCTGCTGTAGTCAAAACGCGCTCAGGCATGTACCCCGGAGCACGA
GACAACTTGCTCTGAATCATGGGGCCGTTTTATTTTTAATATCATATGCA
TGCAAGCCTCCAACTCACCTCAGGTCTCTGTTTCTATGTTTCTATCATGC
ACATTGCACACTCACCTGCGTGTACGAACACGTGATCATGCTCAGCAGCA
CTGCTACGAGTACCTGTATTTATCCGCTAGATATCAAGTGTCAGCTATTT
TTTCCTCAAGATCTAGAGTAGGCGAGCAACGCACGTATCATATATATAGG
TGAGGGAAACCTGCTCTGCTATCTGTACATCTCTTTGGTTTCATCATGAG
ATACCACTCAACAAGTTCTTCGACGTAACTTTTTTGAGATGAAGTACCGT
TGCCGCTCCCTTGACGTTGTCAGGCCCAACAAGGCCCCACAAAGGAAATT
TGTTAAAGTCAAATCTTGTGTGACACACGATACATCATTTTGTGAGGTCG
TACAGGGTCCACGTGTGTGCCGTCTTTATTTCGAGCGTTGTCTGCCTGCA
TCTCAGCAGGAGTAAAACACGCAGAGATCCGCTCAGTTATTGTTGACGAA
CGAATCGCACACAGCGCACACCCACAGCAGTTTTGACATCCCCGTCTCAG
ATCTCGATTTTTCCAGAATTTTCTGCCGAGGACGACGTCTCAACCCTCTC
TTTCTTTTTTACTCGTACTTATGCGTTGATACACGTGCGCCATATCACAT
CAAACGACAGGTGGCGGAGGGTATTCCTGGAAAGACGGACATGCAGTGCT
TCCACCGCTGGACCAAGGTGTTCAACGGCGGCACCAAGGGTCCATGGTCT
GCCGAGGACGACGCGCGCGTGGCGGAGCTGGTAGGCCAGATCGGCGCGAA
GAAGTGGAGCTGTATCGCCGCCCAGCTCCCCGGTCGGACCGGGAAGCAGT
GCCGCGAGCGCTGGCATAACCATCTCAACCCGCACATCAGCAAGGTTCCC
TGGAGCGAGCATGAGGTAAAGTGTGCTGTGGTGCGATAGAGCATTGCCCC
GTCTTAAGTTGGGTTACCCGGGGACCCGCATCGGTTACCTGAGTAATTAA
ATCGCCAGACGGTACCCCTTCGGTAATGAGGTACTGTACCATGGACATCA
CACACGACGCCCTCTTACTTTTTTTCCAGGCACCGTATTTCACTGTCCCG
GGGGGGGCACCGTATTACACTTCCCAACTTACCCGGGTACCCGGTTATGT
CCACCCCCTCGAGCCCAGACGGGTACCCGGGTCCCAAACATTGACGGGGC
AATGCTCGATGATGGTGCGATCGATGTGATGTGATTTGATTTGATGCTAG
GTGATATGATTTGATGTGACGTTGTGTTTGTGACGCCGACACGGCTGCGC
AGGCGGCTGGTGCTGTTGCAGTCGGGTAGCGTTGTCTCGGCTGTTTTTTC
TGCTGCATTTTTGGCGAGTTGCAGGCATCTTTATGCTACCGCTGTTGTGC
TGCTGTTACGGCTGTTTCAAGTTTCGGCCTAAACCATCTTGACGCGCCAA
CTTTGCCGGCAAAGCTAGAACCAGCAGTAGTCGTGAGGGTCGAGTCAAAA
TCGTTGTCTCCCACGGTCGATGTGCGTACAGCTTGCGAGTGTGGGTGGGT
GCTTGTGTTTCTTGCTCGTCTGCCCTAGCTGTCCTTCTGACCCTCCCTCT
GTGCCGCCTTTCGGTCCCTCTTCGTTGTTGTGTCCACCCCAACTACTTTT
CCAGGACCACACGATCCTCATCCAGCACCAAAAGCTCGGCAACAAGTGGG
CCGAGATCGCTAAGGTGATGCCCGGTCGGACAGATAACGCCATCAAAAAC
CACTGGAACTCCTCGATGAAGCGGAAGGCGGAGATCGTGTTCGCTCGTAC
GGATCTGGACCCGAACAGTCCCGAGTTCGAAGGCCGGGGGTTCAAGAACA
CCATCGATATCGCCTTGGCCGCCGTGAGGGGGAGGATCACCGTCAGCAAC
CCCAACGAGCCTGCCACTCGCCGAGGTAACACGAAAGTTGTAAGACCGTG
TCGTACGTTTGACTCTCCCTCCATCCCTCCCTCTCTCCCTCCCCCGTGTT
ATCATACGTTCCTCAATCACTTGGAGGCGTAAGAGCGTAAAAATCATCCA
TCCGTGCGTGTACAGTCACTGCGGTTGACAGGTAGGTGTTTGTGGCACAC
CTGATTTGTTTTTTATTCCCGGCCCTTGCCTTTCAGGTTTGTTGTTTTCC
GCGGTTTTGCGGCGTTGGCGCGCTTCGGAAGGCCCCCGCTGTGCCGATAT
TAAATATTTTTAGCAGGCAGCTCTTCACATCCCAAACCCGCTCCTGTCCA
ACGCCCCTCCCTCCCCCTCCCAAAAAAAAACTGTTTTTTTCACAAAATAA
CCTTAAACACCACAGGACGCCCGCCGCGCAAGCGCATTGAAGTGGAGGAA
GGGTCGGCGCCCGCTGCGTCGTCGAAGGGCGGGAAAGCTAGTAGCACGTC
GAAATCGCAGGCCACCGCGGCTGGTTCTTCTGCCGCATCCTCCTCTGCTC
GAGCACAAGCAGCTGGGTCAGCACCCTCCGCTCGAGCACAAGCAGCCGTA
TCGGCGTCCCGCGCTGCGGCGGTCGACCGGCACCCGCCGGCTGCCCGCGC
GGGCGGCAGCGGCAACACCGGCAACAAGGACAGCAGGCGCGGGCGCCCGG
AACCTGCCGTTAAGAAGCCTGATCGCGAACCCCGGTCTCGGCAGGTGCAA
CGGCAGGACGCGCGCGCCACCGACGGTTACGCGCATGATGGTGACGGCGA
CAGCAGCGAAGGCGAAATGGGCGGCGGCGGCGGCGGCGGCGGCAACCGGA
GTGTGAAAGATGACGACGGGCAGGAGGAAGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAAATGCGACGCGGGAACGGAGGAAGAGACGCCTG
GAGACAGTCCAGGAACGGTCGCCGGTACGCCGATAGAGGCGGCGACGGCA
TCGAACGGCCCAGCCGAAGCACCTCGAGCGCAAGGTCCGACGATTCGTTC
GTGGGAGGACAGGCGCTGGCAAGCTGGAATCCTCTGACGCCGACGGACAG
AAGGTTGCGCGCCCTTGGGCCATCCCCGGGGTGCGTTTTTTTTTTCGCCG
TACGTTCCCTGGAATCCACTTTTTACGTTCTTTGCTGCGCCAACTTTCAG
GTCACACTCACGCCCGTGTTTTTACGGGGATGTGACACTGCTGTGTTGCC
TTCGTGCGCGGCTGCTACTTCTACGTGTCCCGTGCTGGGGCTTTTGTTCT
GAACGCCTGTCCATTTCTACATTTTTGCGCACTCGGCTTGTCCCTCACCG
GGTTTGTTTACGCCCTGTATTGGCAAGAGTCACTCCGTATTGGTGTGATT
CGTTGTGGTAGTGTTTTTTCTATATTCGTCTCGCGCTGTTGTGCCTGACC
TTCAATTTTGTTTCGGTTGTCTCGTGCTGTTTGTGCCTGATCTTCAGGGT
AATGACCGGCTTGAGCAAGCGCATTCACGACGTGAGCTTCAAAGACCGAG
GAAGTGCGTCCCCCAGCCTTCACAGCTTCTTCCCCAACACACCTGGCGGC
ACGGGCATGTCACAGTACTCGTCATTGAACGGTGAGCTACAGGGCGCTTT
CGTGCGGTTGAATGCCGATCTTGCGCTTTGATTTGATTCTGTGTGTATGA
TAGTAACGGTTTGCAACAAACATCGCGAACTCGTTCTGCCTCAAAAGAAG
GTGATGGACGGAGAATATCTGGCGGATTAAATCGTTATACTTGTCGCAGT
CGACAGCCGCGGCATCCGTCTCTTACCGTGTTTTTTTTGTTTTCCTTCCG
CCGTTAACCTTCTGTTCTGGGACCAGGGTATTTTGTTCCTTTTCACACGA
ACAGCCCGGGTTCCAAATCAGAACCATGCAATGTTCCCCCGAGAAAAAGA
ATACGCCTCAAATGTCCCTGTCAAATGTACAGCAGTCACGAAACCAAGTG
AAAATGTACACATCAGCACCACAGAGATATACAGCCAGGGCCCCTGACGG
TGGCTCACAACGGGCTGGTTACGTCCCTGGAGAGTACAGAAGGGATACCC
GGTGGTCGAGATGCCGCGGCTAGCTCCCAGGCGTCGTGCAACGTATTCTA
ACCATCAATAGCGCATAAAGCATCCAGTACACTCAAAACAAGATAATAAG
GAAAAATAGTTACTGCTTTTGAGTTACTCGTTTCCCGCTGTAGCTCCCGG
CCTGCCAAATACACTTTGGGTGGGGGCCCCGTGGCCTGCGGACGGCCTGA
AGGCCGGTCCTTCCTTCTCGCACATAGATAGGTACAGGTATATCATTGGC
ACTGGTAGCAGTCGCAGCAGCCGCAGTAGTAGTAGTATTCTAGCAACCAA
TCGCATGTATCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTCTC
TGGGTTCACCATACAAGATTATAATATAGCATCATCTCCACAGGATGTAT
CACACTACTTCTGCTCTTGCTTGTTTTGTGATACCGACAAGGGAGGAGGT
ATCATATGGCATGTGATGTAATGCTGTACAGTAGTAGCAGTTGTAGTCGG
AGTAGTCCTGCCATAATGCTGGTATGGTGTTTCTCTCCAGAAAAATAGAA
GTATGATGCGAAGTGTATGCTGATGATACTAGAAACTACTGATGATGTTT
CAGACGAGATGATTTCAGATTTCGACTGATGGGGATTTATTATGTTGACT
GAGTCTTGGGCACCCTCACACCCCTTGACCACACACATAACACCAGCAGT
GAGCGGTGTTTGTTTGCCCTCTTGCCCGTATCCGAGTGCAGTCGGAATGC
TGCTCAACTCCCAACGTGAGGGGGTTCAGGAATTTTTTGTTTCTGTCCCC
ATCCCAAAGAGACCGGCCAAAAAATAAAATAAAAATAAAGGACTAATAAT
GTTTGATCAATAAATCGCCTTGAAGTTACAGAAGGGTTAAACTTACCGTT
GTCTCTGTCACGACCGCGCATGTGTTTTTGCATCGTCCCGTCCTGCCAGA
TACTCACTCTCCAGGGTCATTGATTACCGGGTCTGTGACAGACGTGACAC
TTCCCGTCTGGGACACTCCGAAGAACAAGCGCCGGCCGCTCATTACGCCT
GGTGGCATCGGCCGATTGAACGGCAGGTTTACCGGCGGCGGCGGTGGCGG
CGGCGGCAGCGGTAGCGGCGGGGGCGGCGGTGGCGGCGGTGGCGGTCCCG
CTGCCGAAACGCCGGACATGTCGCCGCTCTGGGGCGGCCGACACAACGGA
GCCTCCCCGGCGCTTTCAGCCATCACCGCCGCTGATATCTCACCGTATCA
CGTGGAGGACGCGACGTTGCACACCCCCGGCGGGGGCCGAAGAGGAGGCC
GCCACGTCTTGGCCGTTGACGAGACGCGAGAAGAGGAGATGGACATCAGC
TCTGCCGCGCGCGACCTTAGGGAGTTCAAGGCCGGCGCAGGCGGTGCCCG
CGCTCCTTCGTGGGCAGACACGGGATCTGGGCGAGCGGGGGGGCTGAAGG
CGGGGAGGAGCAAGGGTGAGAGTCTGGCGTACCTCTGCACCAGGAATTGC
TCAGTCGTGGGGATGAACGAAAGCGGCCGAAGCTGACTCGAGTATTAGTT
GCTCTTGGCCTGCAGAACTCCCTAGTAGTGGCTACCAGCGTGGAGATGAA
CGAAAGTGGCCGGAGCTGACTCGAGTACTAGTTGCTCTCGGCCTGCGGCC
CCTTGTTCATTGATTGGACGGGGTACAAGCGCCTATCATGGTTTGCAATG
ACATTGACCGTTGGTTCGGTTGGCCCTTTTTTCCGTGCTTGTTTCACTGA
TGCCTGTCCGCGTCTATCGTTTCACCTATGAACAGGTTTCTCAGGGTCTG
TGAGCCAGTTAACAACCAATCGCATGTTCGCATCCGGTGCAGCAATCATC
GGCGGTAGCCCAATGCAGGACTCCCCCTCTTACCACATGATGGCCGGCTG
CGAGAGCGACGGAGGTGCGTGCTTGCTTCCGTGATGGCTGTATCTTGGAC
CATTTGATGTGCTGCGGTAAAGTTTTACGCGTTATTTTTTCTTTTCGTGC
CCCGATACCACTCGCTTCGTTTCTTGCTTGTATGTTGGTGTTGTTGCATG
GAAAGGGCGTGGTTGTGCGGAGTGTTTACGTTCGGCAGTACCGTGGCAAG
TTTGGATGGCCGTGCCCATCGCGCGTCCCTTTTCAGGTTGCTCTGCTGAT
GATATTCCTGCCCGCGTTTTCGTTTCATCCGCCTTATGTCTCTCTCCCTC
TCTCCTCCTCCTCCTCCCGGTCCCCGTCCCTCTCCTCGGCCTTCAGGTAT
CAGCGACAACGACCACTCGTTCCTCCCGAAGCGTAAGCTCGCCGAGCTCG
CCACCACGCCGAACTCTCGTAGCAGTGGCGGCGCTGATGTTGACGGCTTC
TTCGCTTCGGGGTCCAGCCCCGAGGATGGCTCCGGCGGCGTCAGCGGCGG
CTACAAGGCACGAGACGCGCGAGCGGGCGGTGGCGCTGCGCTGACGCCGG
TGGTCAAGCGCCGCGCCATTCTGTACGACAGGAGCCCGCACGAGAACAAC
CACCACGCTGCCGCTTTGAATAACACCAACGACTCGAGTTTTGTGGACAC
CGAGGCTGCGGCGGCGGCGGCGGCATCTGCGCTGTTGGCCGTGCGGTCGT
CTGACGGGCCGAAGAGGTGGGCGCAAGCGTAACTGCTGCAGTCCCGCCGC
GTCGCTCCGCTTGGTGTTTCGGGTCTCGAGTCGCGTGCAACTGCAGGGTG
TCTTTTTCCCGGCTTTTTCTGCGTGTTTGTGTCGAGCATGGCGCTGTGCC
CATGTCGCTGCAACCCTAATCTACACTCACCTCACCCCCACCCCCCCCCA
CCCCCGATTTACTTTTTCTAGTGAATCACACCTTTGCATACCACACATTC
GTCGTTGTTATCGACCCACGCTTATTTCGTTTTCGTCTCGAACCCGTGTC
GCTTTCCACAGGACTGGAGGCATCGGTCGAGACGCTGGATCACCCCCCGC
ACCCGCCAATATGTCCTTGATGGATTTCTGCCGCTCCAGCCCTTCGACAA
CGCTCATGTCCCAAACCTTCCACTGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig12:208435..218060-

>mRNA_P-littoralis_Contig12.43.1 ID=mRNA_P-littoralis_Contig12.43.1|Name=mRNA_P-littoralis_Contig12.43.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2886bp|location=Sequence derived from alignment at P-littoralis_Contig12:208435..218060- (Pylaiella littoralis U1_48)
ATGCAACCCGATGAGGAGCAGCAACTGGACGTGGGCAACAACAACAGCAA
CGGTGATGCGGACGCGGACGCCTTGACCGGCAGTTCTTTCGGTGAACAAC
GGGAGAACCAGAAGATGGAGCAGGAGCAGGAGCAGGAGCAGGAGCGGCAG
GAGGAGCACCCGGCTGCCGCGGGGGGGAGCGAGGGACGCAGAACCCAGCG
GGCGGCGGCGGCCAAGGCCACGGACCGCGGCAAGCGGATCGCCGAGATGA
TCCTCGAGTGCGACGAGGACGGAGAGCAGGGCGGGGATGACCCTGAGGCG
GAGGAGGAGGAGGCTTCGGGCGGAAACGAGGAGACGAGCGGCAGCGGTGA
CGGCGCTGGCGAGCTGGCGGATGAGGAGGACGACGGGGCCGGAAGCAACG
GCTCCCTCTACCGCCGGAAGCCGATCAAGACGAGGTGGTCTGCGGCGGAA
GACACCCAGCTGAAGAAGCTCGTGGACACCCACGGCTCGGGGAACTGGAG
AGTGGTGGCGGAGGGTATTCCTGGAAAGACGGACATGCAGTGCTTCCACC
GCTGGACCAAGGTGTTCAACGGCGGCACCAAGGGTCCATGGTCTGCCGAG
GACGACGCGCGCGTGGCGGAGCTGGTAGGCCAGATCGGCGCGAAGAAGTG
GAGCTGTATCGCCGCCCAGCTCCCCGGTCGGACCGGGAAGCAGTGCCGCG
AGCGCTGGCATAACCATCTCAACCCGCACATCAGCAAGGTTCCCTGGAGC
GAGCATGAGGACCACACGATCCTCATCCAGCACCAAAAGCTCGGCAACAA
GTGGGCCGAGATCGCTAAGGTGATGCCCGGTCGGACAGATAACGCCATCA
AAAACCACTGGAACTCCTCGATGAAGCGGAAGGCGGAGATCGTGTTCGCT
CGTACGGATCTGGACCCGAACAGTCCCGAGTTCGAAGGCCGGGGGTTCAA
GAACACCATCGATATCGCCTTGGCCGCCGTGAGGGGGAGGATCACCGTCA
GCAACCCCAACGAGCCTGCCACTCGCCGAGGACGCCCGCCGCGCAAGCGC
ATTGAAGTGGAGGAAGGGTCGGCGCCCGCTGCGTCGTCGAAGGGCGGGAA
AGCTAGTAGCACGTCGAAATCGCAGGCCACCGCGGCTGGTTCTTCTGCCG
CATCCTCCTCTGCTCGAGCACAAGCAGCTGGGTCAGCACCCTCCGCTCGA
GCACAAGCAGCCGTATCGGCGTCCCGCGCTGCGGCGGTCGACCGGCACCC
GCCGGCTGCCCGCGCGGGCGGCAGCGGCAACACCGGCAACAAGGACAGCA
GGCGCGGGCGCCCGGAACCTGCCGTTAAGAAGCCTGATCGCGAACCCCGG
TCTCGGCAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAAATGCGACGCGGGAACGGAGGAAGAGACGCCTGGAGACAGTCCAGGA
ACGGTCGCCGGTACGCCGATAGAGGCGGCGACGGCATCGAACGGCCCAGC
CGAAGCACCTCGAGCGCAAGGTCCGACGATTCGTTCGTGGGAGGACAGGC
GCTGGCAAGCTGGAATCCTCTGACGCCGACGGACAGAAGGTTGCGCGCCC
TTGGGCCATCCCCGGGGGTAATGACCGGCTTGAGCAAGCGCATTCACGAC
GTGAGCTTCAAAGACCGAGGAAGTGCGTCCCCCAGCCTTCACAGCTTCTT
CCCCAACACACCTGGCGGCACGGGCATGTCACAGTACTCGTCATTGAACG
ATACTCACTCTCCAGGGTCATTGATTACCGGGTCTGTGACAGACGTGACA
CTTCCCGTCTGGGACACTCCGAAGAACAAGCGCCGGCCGCTCATTACGCC
TGGTGGCATCGGCCGATTGAACGGCAGGTTTACCGGCGGCGGCGGTGGCG
GCGGCGGCAGCGGTAGCGGCGGGGGCGGCGGTGGCGGCGGTGGCGGTCCC
GCTGCCGAAACGCCGGACATGTCGCCGCTCTGGGGCGGCCGACACAACGG
AGCCTCCCCGGCGCTTTCAGCCATCACCGCCGCTGATATCTCACCGTATC
ACGTGGAGGACGCGACGTTGCACACCCCCGGCGGGGGCCGAAGAGGAGGC
CGCCACGTCTTGGCCGTTGACGAGACGCGAGAAGAGGAGATGGACATCAG
CTCTGCCGCGCGCGACCTTAGGGAGTTCAAGGCCGGCGCAGGCGGTGCCC
GCGCTCCTTCGTGGGCAGACACGGGATCTGGGCGAGCGGGGGGGCTGAAG
GCGGGGAGGAGCAAGGGTGAGAGTTTCTCAGGGTCTGTGAGCCAGTTAAC
AACCAATCGCATGTTCGCATCCGGTGCAGCAATCATCGGCGGTAGCCCAA
TGCAGGACTCCCCCTCTTACCACATGATGGCCGGCTGCGAGAGCGACGGA
GGTATCAGCGACAACGACCACTCGTTCCTCCCGAAGCGTAAGCTCGCCGA
GCTCGCCACCACGCCGAACTCTCGTAGCAGTGGCGGCGCTGATGTTGACG
GCTTCTTCGCTTCGGGGTCCAGCCCCGAGGATGGCTCCGGCGGCGTCAGC
GGCGGCTACAAGGCACGAGACGCGCGAGCGGGCGGTGGCGCTGCGCTGAC
GCCGGTGGTCAAGCGCCGCGCCATTCTGTACGACAGGAGCCCGCACGAGA
ACAACCACCACGCTGCCGCTTTGAATAACACCAACGACTCGAGTTTTGTG
GACACCGAGGCTGCGGCGGCGGCGGCGGCATCTGCGCTGTTGGCCGTGCG
GTCGTCTGACGGGCCGAAGAGGACTGGAGGCATCGGTCGAGACGCTGGAT
CACCCCCCGCACCCGCCAATATGTCCTTGATGGATTTCTGCCGCTCCAGC
CCTTCGACAACGCTCATGTCCCAAACCTTCCACTGA
back to top