mRNA_P-littoralis_Contig12.41.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig12.41.2
Unique Name	mRNA_P-littoralis_Contig12.41.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: D8LAU6_ECTSI (rRNA-processing protein EFG1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU6_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 1.310e-110
Identity = 293/512 (57.23%), Postives = 327/512 (63.87%), Query Frame = 1

Query:  175 MPHTNRARRADHFRSIDNTNSNSSNVNTSKPGGRRHS------QHGQDDGGAFDHDLGSRNDAPERFGGRSAG------------------RGAXXXXXXXXXXXXXXXXXXGARAARGPVAGAPTTAAAGGKGKSRTPSMKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQGDIEEAVRAELERNRESEEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSHERFLKEALARGEAAGWTEFQDNLNKFVTSSAGGGPERAAPSPSLEAEDANAGDGRGLKRKKEIDSLPVVAQENIWNEEDDRXXXXXXXXXXXXXXXXXXAVNAG--DDEVAGAEAAPAATDTASALLRKKSSKDKKNLSAQVESGPRTSQPE-------SSDSEGELSGDEGFGAAASDEEEAYSFAEARMRWASGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXHDSDESVGQIDARALGRSNG 1611
            MPHTNRARRADH+RSID   S+                      H + DGGA D++  +   A ER+GGRS G                  R  XXXXXXXXXXXXXXXXXX                    KGK+  PS KNRIRSLTRLMN+PGIEEEQRLHL+ QVEELEGK SER+K ERERTLAIKYHKAKFFDRRKALRRLAQIHRKL+GDIEEA RAELER R++EEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSH RFLKEAL RGEAAGWTEFQ+NL+KFVT    GG  + A   +  AE+ +      +KR K I +LPVVAQ+ +W++ +D      XXXXXXXXXXXXX    G    + AG +AAPAA             + KK      ESG  + +PE       SSDS GELSGDEGFGAAASDE++AYSFAEARMRWASGG G          XXXXXXXX              SVG I A AL RSNG
Sbjct:    1 MPHTNRARRADHYRSIDGAGSSGXXXXXXXXXXXXXXXXXXXXSHQEQDGGALDYNHDTNVKASERYGGRSPGAXXXXXXXXXXXRXXXGARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKN--PSAKNRIRSLTRLMNKPGIEEEQRLHLQRQVEELEGKVSEREKQERERTLAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAARAELERKRDTEEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSHVRFLKEALVRGEAAGWTEFQENLDKFVTGGGEGGRPKVAVDAAAAAEEGD------VKRNKGIGALPVVAQQKLWDDGEDNSSAEGXXXXXXXXXXXXXXXGDGVAGQQGAGKDAAPAA-------------RGKKVKRQPTESGSGSWEPEQGEAAGDSSDSAGELSGDEGFGAAASDEDDAYSFAEARMRWASGGGGSTSGRSDGSDXXXXXXXX--------------SVGDIYADALARSNG 477

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: A0A7S1CB15_9STRA (rRNA-processing protein EFG1 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB15_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.310e-13
Identity = 50/126 (39.68%), Postives = 78/126 (61.90%), Query Frame = 1

Query:  493 GGKGKSRTPSMKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKL----QGDIEEAVRAELERNRESEEADLKYVLYFPKDKKYLPL 858
            GG    +TPS+KNR+RS+ RL+N P +  + R   +  +  LE K +E  + ERER +A +YHK KFF+R+K +RR+A+    L      +  EA   EL+R+    EADL+Y+ ++P+ +KY+ L
Sbjct:    2 GGSKPHKTPSLKNRMRSVRRLLNNPKLTGQARKDKERLLRRLEAKLAEGAQGERERKIARRYHKVKFFERKKVVRRIARAQAALAAADSAEAREAASTELKRH----EADLEYITWYPRHEKYVAL 123

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: Q015G9_OSTTA (rRNA-processing protein EFG1 n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q015G9_OSTTA)

HSP 1 Score: 79.7 bits (195), Expect = 1.180e-12
Identity = 49/118 (41.53%), Postives = 80/118 (67.80%), Query Frame = 1

Query:  508 SRTPSMKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQGDIE-EAVRAELERNRESEEADLKYVLYFPKDKKYLPL 858
            +R PS+KN+IRS+TRL+ RP + ++ R   + ++E+LE +  + ++ ERE+ L+ +YHK KFF+R K  RR+AQ+ R+ +G    +   AEL R RE    DL+YV +FP+ +KY+ +
Sbjct:   21 ARRPSVKNQIRSITRLLARPNVPQKLREEKQRELEKLERQGRDNKRVEREKKLSTRYHKVKFFERVKLTRRIAQLEREKEGGAGGDDAEAELSRLRE----DLEYVTHFPRGEKYVSV 134

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: A0A7R9UYT8_DIALT (rRNA-processing protein EFG1 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UYT8_DIALT)

HSP 1 Score: 76.6 bits (187), Expect = 2.570e-12
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 1

Query:  499 KGKSRTPSM---KNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQGDIEEAVRAELERNRESEEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSHERFLKEALARGEAAG 945
            +G+ + PS+   K ++RS+ R +NRP +  E +   +  + +L     + ++   E   A KYHK KFF+RRK  RR+ Q  RKL    + A RAELER  ++   DL+Y+ YFP + KYL L   + G     +  +R L+E +A+  A G
Sbjct:    8 RGQEKRPSVTHVKKQMRSVQRTLNRPELPAEAKAKHEAALAKLNDDLRKAKRSRLESHRATKYHKVKFFERRKCERRIGQTERKLAAASDPAERAELERQLDAHRLDLQYIRYFPPEHKYLSLYPTEGGENDFVQKRKRKLRELVAKRIAEG 159

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: A0A7S2RJF1_9STRA (rRNA-processing protein EFG1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJF1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.690e-11
Identity = 60/153 (39.22%), Postives = 88/153 (57.52%), Query Frame = 1

Query:  505 KSRTPSMKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQ--GDIEEAVRAELERNRESEEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSHERFL------KEALARGEA 939
            K +TPS KN+IRSL RL+++  ++ E R  +++++ EL  +  ++Q+ + ER  A +YHK KFF+RRK +RRL  + ++L    D  E    + E  R  E  D+ YV YFP DKKY+ L         A+R  ERF       K A+ RGEA
Sbjct:    9 KKKTPSRKNQIRSLRRLLSKEDLDAELRKSIESKLGELGEQVVDKQQEDLERKRAQRYHKVKFFERRKLMRRLEAVKKQLSKAADTSEVTTLKDELVRLDE--DMTYVRYFPNDKKYISLFATDVDEATARR-RERFRDLARQNKAAVLRGEA 158

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: A0A7S0IE89_MICPS (rRNA-processing protein EFG1 n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IE89_MICPS)

HSP 1 Score: 75.1 bits (183), Expect = 9.650e-11
Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 1

Query:  493 GGKGKSRTPSMKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQGDIE--EAVRAELERNRESEEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSHERF 909
            GG+G  +  S KN++R++ RL+ R G+ E+ RL  + ++E+LEG F E ++ ERER +A+KYHK KFF+R K  R + ++ +    +    +AV  ELE  R+    DL YV  FPK  KY+ + KG       +R  E+ 
Sbjct:    6 GGRGGKKV-STKNQMRNIQRLLKREGLPEKLRLEKQRELEKLEGIFKENKQAERERKMAVKYHKVKFFERVKLTRAIEKLEKANPDERRRPDAVTRELESLRD----DLHYVTNFPKGYKYVSVLKGDAEDDAIKRKREKL 141

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: A0A8H3CYQ9_9AGAM (rRNA-processing protein EFG1 n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3CYQ9_9AGAM)

HSP 1 Score: 70.5 bits (171), Expect = 1.240e-9
Identity = 46/143 (32.17%), Postives = 84/143 (58.74%), Query Frame = 1

Query:  523 MKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQG-DIEEAVRAELERNRESEEADLKYVLYFPKDKKYL---PLGKGKEGPPRAQRSHERFL-KEALARGE 936
            +K+ IR   RL+ +  +  + R+  + +++ LE   ++ +  ++ERT+A++YHK KFFD+RK  R++ Q+ R L+G ++++  R +L++   S   DL Y+L +PK  KY+   P  +  +      R   R L +EA+ RGE
Sbjct:   39 VKSAIRQTRRLLAKDNLAADIRIQSERRLKSLETDLAKAEIRKKERTMAVRYHKIKFFDKRKVTRKIGQVKRALEGSELDKKERKKLQKELLSHRVDLNYILNYPKLDKYIALYPSSESNDDQTDKLREERRLLVREAMERGE 181

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: A0A5N5QPX3_9AGAM (rRNA-processing protein EFG1 n=1 Tax=Ceratobasidium theobromae TaxID=1582974 RepID=A0A5N5QPX3_9AGAM)

HSP 1 Score: 69.7 bits (169), Expect = 2.360e-9
Identity = 46/143 (32.17%), Postives = 85/143 (59.44%), Query Frame = 1

Query:  523 MKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQ-GDIEEAVRAELERNRESEEADLKYVLYFPKDKKYL---PLGKGKEGPPRAQRSHERFL-KEALARGE 936
            +K+ +R  +RL+ +  +  + R+  + +++ LE   ++ Q  ++ERT+A++YHK KFFDR+K  R++ Q  R L+  +++E  R +L+    +   DL Y+L FPK +KY+   P G+  +      R  +R L ++A+ RGE
Sbjct:   38 LKSALRQTSRLLAKDNLAADVRVETERRLKSLEADLAKAQTQKKERTMAVRYHKIKFFDRQKVNRKIKQAKRALEVPELDETERKQLQDVLLAHRVDLNYILSFPKIEKYIALYPSGESSDENTDKLREEQRLLVRQAMERGE 180

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: A0A8K0XC05_9AGAM (Uncharacterized protein n=1 Tax=Phlebopus sp. FC_14 TaxID=2615122 RepID=A0A8K0XC05_9AGAM)

HSP 1 Score: 68.9 bits (167), Expect = 4.610e-9
Identity = 61/201 (30.35%), Postives = 97/201 (48.26%), Query Frame = 1

Query:  523 MKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQGDIEEAVRAELERNRESEEADLKYVLYFPKDKKYLPLGK-----GKEGPPRA-------QRSHERFL-KEALARGEAAGWTEFQDNLNKFVTSSAGGGPERAAPSPSLEAEDANAGDGRGLKRKKE 1086
            +K+ +R   RL+ +  +    R+  + +++ LE   S  +   +ERTLA++YHK KFF+R+K LRR+ Q  RKL        + ELE     +  DL Y++++PK KKY+ L       G   P  A       +RS+ R L +  +ARGE +   E +   +K        GP      P  +   +  G  R L ++KE
Sbjct:   50 LKSSLRQAKRLLAKENLAANVRVETERRLKALEADLSRAEDARKERTLAVRYHKVKFFERQKVLRRITQTKRKL-STASNTQKEELELALADQRVDLNYIVHYPKTKKYISLFPPDVRFGTAAPATAATADENDERSNVRALIRSQMARGELSNEPENEVVKSKQERE----GPNDTRLRPGRKESKSTQGSQRNLAKQKE 245

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BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Match: A0A8H5FZW0_9AGAR (rRNA-processing protein EFG1 n=1 Tax=Leucoagaricus leucothites TaxID=201217 RepID=A0A8H5FZW0_9AGAR)

HSP 1 Score: 68.6 bits (166), Expect = 5.390e-9
Identity = 45/144 (31.25%), Postives = 82/144 (56.94%), Query Frame = 1

Query:  523 MKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEGKFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQGDIEEAVRAELERNRESEEADLKYVLYFPKDKKYLPL--GKGKEGPPRAQRSHERFLKEALARGEAAGW 948
            +K+ +R   RL+ +  +  + R+  + +++ LE + ++ +   +ERT+A +YHK KFF+R+K  R++AQ  ++L  +  E+ R +L +       DL Y+L++PK KKY+ L   + ++   R+  S E   K A AR E   W
Sbjct:   48 IKSSLRQTRRLLAKDKLAADVRVETERRLKALETELAQAELANKERTIAARYHKVKFFERQKVTRKIAQTKKQLSSESSESSRKKLTKALNDLRVDLNYILHYPKLKKYISLFPPEVRQDGARSAPSSEDAAKTAHAREEVRSW 191

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig12.41.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LAU6_ECTSI	1.310e-110	57.23	rRNA-processing protein EFG1 n=1 Tax=Ectocarpus si...	[more]
A0A7S1CB15_9STRA	1.310e-13	39.68	rRNA-processing protein EFG1 (Fragment) n=1 Tax=Bi...	[more]
Q015G9_OSTTA	1.180e-12	41.53	rRNA-processing protein EFG1 n=2 Tax=Ostreococcus ...	[more]
A0A7R9UYT8_DIALT	2.570e-12	35.53	rRNA-processing protein EFG1 n=1 Tax=Diacronema lu...	[more]
A0A7S2RJF1_9STRA	2.690e-11	39.22	rRNA-processing protein EFG1 n=1 Tax=Rhizochromuli...	[more]
A0A7S0IE89_MICPS	9.650e-11	38.30	rRNA-processing protein EFG1 n=1 Tax=Micromonas pu...	[more]
A0A8H3CYQ9_9AGAM	1.240e-9	32.17	rRNA-processing protein EFG1 n=1 Tax=Rhizoctonia s...	[more]
A0A5N5QPX3_9AGAM	2.360e-9	32.17	rRNA-processing protein EFG1 n=1 Tax=Ceratobasidiu...	[more]
A0A8K0XC05_9AGAM	4.610e-9	30.35	Uncharacterized protein n=1 Tax=Phlebopus sp. FC_1...	[more]
A0A8H5FZW0_9AGAR	5.390e-9	31.25	rRNA-processing protein EFG1 n=1 Tax=Leucoagaricus...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig12	contig	P-littoralis_Contig12:201772..206286 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	2880.D8LAU6
PFAMs	Efg1
Model size	2186
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	5
Evalue	6.7e-111
EggNOG OGs	KOG4484@1\|root,KOG4484@2759\|Eukaryota
Description	rRNA processing
Cds size	2010
COG category	A

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig12.41.2	prot_P-littoralis_Contig12.41.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig12 201946..206286 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789506.43822-UTR-P-littoralis_Contig12:201771..201945	1680789506.43822-UTR-P-littoralis_Contig12:201771..201945	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig12 201772..201945 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789506.449454-CDS-P-littoralis_Contig12:201945..202338	1680789506.449454-CDS-P-littoralis_Contig12:201945..202338	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig12 201946..202338 +
1680789506.4679177-CDS-P-littoralis_Contig12:202980..203087	1680789506.4679177-CDS-P-littoralis_Contig12:202980..203087	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig12 202981..203087 +
1680789506.4821584-CDS-P-littoralis_Contig12:203411..203487	1680789506.4821584-CDS-P-littoralis_Contig12:203411..203487	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig12 203412..203487 +
1680789506.4908898-CDS-P-littoralis_Contig12:204124..204190	1680789506.4908898-CDS-P-littoralis_Contig12:204124..204190	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig12 204125..204190 +
1680789506.5062094-CDS-P-littoralis_Contig12:204918..206286	1680789506.5062094-CDS-P-littoralis_Contig12:204918..206286	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig12 204919..206286 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig12:201772..206286+
coding sequence from alignment at P-littoralis_Contig12:201772..206286+

protein sequence of mRNA_P-littoralis_Contig12.41.2

>prot_P-littoralis_Contig12.41.2 ID=prot_P-littoralis_Contig12.41.2|Name=mRNA_P-littoralis_Contig12.41.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=670bp
MPHTNRARRADHFRSIDNTNSNSSNVNTSKPGGRRHSQHGQDDGGAFDHD
LGSRNDAPERFGGRSAGRGAGGRGAGRGGQGGAFGRGGGARAARGPVAGA
PTTAAAGGKGKSRTPSMKNRIRSLTRLMNRPGIEEEQRLHLKTQVEELEG
KFSERQKHERERTLAIKYHKAKFFDRRKALRRLAQIHRKLQGDIEEAVRA
ELERNRESEEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSHERFLKEAL
ARGEAAGWTEFQDNLNKFVTSSAGGGPERAAPSPSLEAEDANAGDGRGLK
RKKEIDSLPVVAQENIWNEEDDRSSKEQEEEEEGEGGEEGDAVNAGDDEV
AGAEAAPAATDTASALLRKKSSKDKKNLSAQVESGPRTSQPESSDSEGEL
SGDEGFGAAASDEEEAYSFAEARMRWASGGRGGGEGGGEGGSAGTERASG
GASDGSSDGHDSDESVGQIDARALGRSNGGGSSSKAAKDDGSHDSSSDDS
SSDSCSSDAGERTPVREENHASRPPATSPPQGSDDDEDSGDDIDLNDDFF
MEEKGTGAGEETNNGMVATTPAAGGKNARARRDERRNTSGRGGGGGRVGG
GRGHRTGRGGRGRHGPGRGGYERGRGRSSFGSGGGRAAERGFSADYDPSK
SSNGGTGGRGGTGRAWVPHG

mRNA from alignment at P-littoralis_Contig12:201772..206286+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig12.41.2 ID=mRNA_P-littoralis_Contig12.41.2|Name=mRNA_P-littoralis_Contig12.41.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4515bp|location=Sequence derived from alignment at P-littoralis_Contig12:201772..206286+ (Pylaiella littoralis U1_48)
CTTTACCTCGTATAGGTGTCGCACCAGGCACCTGACAGCTGTGCGCATGG
CTCCTCCTGATAGGCAATCCAAGTTATCACGGTTTAGAAGTGCAGTGCGC
TGATCAGATCCCCGTAGAGTGTACTTGCGTCTGTCCTGACCGACGCAGCA
GCAGAGACTTCGTTGTCTTTCAAGATGCCACACACAAATCGGGCGAGGCG
TGCCGACCATTTTCGCTCCATTGACAACACCAACAGCAACAGCAGTAATG
TGAACACAAGTAAACCAGGAGGCAGACGGCACTCGCAGCATGGACAAGAC
GATGGGGGTGCCTTTGACCACGATCTCGGCAGCAGAAACGACGCTCCAGA
GCGCTTTGGTGGTCGAAGTGCTGGTCGTGGTGCAGGAGGGCGCGGAGCAG
GTCGCGGTGGGCAAGGAGGAGCCTTCGGAAGGGGTGGTGGTGCGCGGGCA
GCAAGAGGACCAGTAGCAGGTGCACCAACAACAGCAGCAGCCGGAGGCAA
GGGAAAGAGCAGGACGCCCTCGATGAAGAACCGCATCAGGAGCTTGACAC
GGCTCATGAACAGACCTGTAAGAATTTGCGGCAAGATACCATGCTGAGTG
GCGTTGTTGTCGCTTGTTTGACGATGTGTCCGTGTGTTAGACGGTGGTTC
GTGGTACTGCTGGCGACACACCAGATGCCACAGCCCAGAAAACAGCACGA
GCCTCCGGGCGGCTTATCTGATCCTGTGAGAGATGTGTGTGTTTGTCTCT
GTGTGTGTGTCTGTGTGTGTGCGTGTGTGTGCGTGTGTGTTTGAGCTCGT
GCGTCTTGAAAATCAAACCCTCGTCTGCTGCGTATATTGCGCTGCTGTGG
CTTGCTGTTTTCTGTAACATGAAGTCAACGTATCACACACTCGTGCACAT
CTCATGATCGTGTGGCTTCTAGTTTCGGCTACACAGCTGTACGACGGTGC
GAAACCCTACTTAGAGATGACATGCAACTTGTACTCCGAAGCAGTTCCAT
TGAAGGTTGTATGCGTCGAGGTAGCTGCCACACCCTTTGAGGTATTTTTG
TGCAAGCGTCGCGGCACAACCTCACCGCCTGTTCACCGTGCTCATCCTAC
CCATCTTCCCCCACCTATTGCCGCTCACGGCGACTTCGCTCGTTGAATCT
GGATGTCCCTCACCCATCTCCCGCCCCGTGTACATGTCTTGTCTTCCGGA
TGTGTCCAGGGCATCGAAGAGGAACAGCGACTACACTTGAAAACTCAGGT
GGAAGAGCTGGAGGGAAAATTTTCGGAGCGGCAAAAACATGAGCGCGAAC
GAACCCTTGCCATCAAGTGAGTCAGCAGTGAAAAATACCAATACTAGTCA
CTTCGTAGTGTTAATTTTATGCTTTATGTGAAGACTGCTTTGGCAGCGAT
TCCGTCGCGTGGAGTCGTCGTCACTCGAGTTTACCCTCTCATCATCGAGG
GAGCATCCGTTTCGCAACTAGGTTCCTGTGGCTCTCCTCTCTCCAACAAC
AGATGTAAAACATTTTCAAATCGACCAGCGTTGCCTCCACCAAGAGTGCG
GATGCCTTTGCCCTTCCTAAACTAGGCCTACTCGTTTCGCGTCCCTCCAA
CCCTGACGCCTTCCTGCTCCTCTCTCACGCGGGAGTGCAGGTACCACAAG
GCAAAGTTCTTCGACCGCAGGAAAGCTCTCCGTCGGCTGGCCCAAATCCA
CCGGAAGCTTCAGGGGGTGAGTCCCGGCTGAGAACCGAAAATACGGCCGC
CGCCGCACAGGATATTATTACTGTACCTTCTCGCGAGACGCGGAATTCTC
GGCAATATCTCGCAGTCAGACTCTCGCCTAAATTTTTCGTAGCCTCAGAG
TTTTCCCGGTGTACGAGGGCAGAGCATCCGCTGGTTTCGGGATCGTCTGC
GACACGATGAACGAGACGTTGGTCGTAACGTGATTTCGCGCAATGTGCGC
CTTCCACCCAAAACGCAATAACTCGAACCAGGAGATAGCTGCGGGTTGTA
TGCACAGTAGTACTGAGGGGGGGTGGGGGGGGGGCACTTAGCTCGTGGGA
GTGTTGTGTTCGTCTGCCTTTGTTCGGCCGGCGGAGCGTGTGTACCATGT
GCCATCGTGGATGCCGTTATCTGAGATGGAGTGTCACAGAAATACCTGGT
ATGTATGTAAATCGGCCACAAGTGACCCGCTTCTATTATCTCTTTCTCGT
TTGCCTGTCCGGAATTCCCGTTGATGGCTTTCCGCCAGCTTTCACAAGAT
GGCGGTAATTGTGACCCGTGTTTCGCCCTTTTCCCTGTGTCCTATCGTAC
GCCCCCCCCCCAAATTGCGCGCAATGTGACTTGGTTTTGCATGTACGAAC
TAGGACATCGAGGAGGCGGTGCGAGCGGAGCTAGAGAGAAATCGTGAAAG
CGAGGAGGCGGACCTGAAGGTGCAGATATTGTCTCACGCTCCAAGACTTA
ACGACGTGGTTCAAGAGACGCAGGGCGCTGTAATTCTAGAGAAACCTAGC
GTTTGTGCTTCGCGCAGCCTGCCTTTAGTCGCTCGATGGTGATGGCCTGG
TCTGCTTTTTTGTGCTCCGTCATGCTCAGCAATTCGTGCCTTTGGGTGCA
AAAGGATGGTAGTTGGGATCATGTCACGCCGTCATTTCTATTGGGAGAAG
GTATAGCGAAAGCTGTTCTGTTTTGCCGTCAATACCCGGGAGGGACCCTG
TGTCCCGTAGCAAATTGCGGTAAGCCCGTATGGCCATCTTTGCCGTGTTG
GTCGGCGTTGCTCGTAAGCGCACTTCACCTTCAGGGCGGCCATATATGGC
TCTGCAGGGAACTCAACGGGGTGATGTAGTCGTGGGGTGCAGTAGTACCC
AACTCCGGCAAGACATGCCGAAAACTAGACGCGGAAGCTCGATTTTTGGG
GGAAATGTGGAGTGTTGGCATGCTCATGCTCTGGTTGATGTCTAAGATAC
ACCCTTCTGGATAAGGAACGCGGCTTGCCAGTTCAGGCCAAAAGAGGCGT
TTGTCGCTGGTATCAACATGCTTTGAAGTATTTGCTGTGCGTTGCGTGCC
TGTGAACCAGGCTACTGGTGAGTGTGTATGCACACTTTGCCCATTCCGAT
GTCCACCTTCGCCCCACCCCCGCGCCTTCTACATGCCCTTTTGACAGTAC
GTCCTGTACTTCCCTAAGGACAAAAAGTACCTACCGCTGGGAAAGGGCAA
AGAAGGACCTCCGCGCGCGCAGCGCTCCCACGAGCGCTTCCTCAAGGAGG
CTTTGGCACGCGGGGAGGCCGCCGGATGGACGGAGTTCCAGGACAATCTC
AACAAGTTTGTCACCAGCAGTGCGGGGGGCGGTCCAGAGAGAGCGGCCCC
CTCTCCCTCGTTGGAGGCCGAGGATGCGAACGCTGGCGACGGGCGTGGCT
TGAAGAGGAAGAAGGAGATTGACTCGCTCCCGGTGGTGGCCCAGGAAAAC
ATTTGGAATGAAGAGGATGACAGGAGCAGCAAGGAGCAGGAGGAGGAGGA
GGAGGGAGAGGGAGGTGAAGAGGGGGATGCCGTCAACGCGGGAGATGATG
AAGTAGCCGGGGCAGAAGCCGCGCCGGCGGCAACGGACACTGCTTCGGCG
CTCCTCCGCAAGAAGAGCAGCAAGGATAAGAAAAATTTGTCGGCGCAAGT
GGAATCGGGACCGAGGACGTCGCAGCCTGAAAGCTCTGATTCGGAAGGCG
AGCTCAGCGGAGACGAGGGCTTCGGAGCGGCGGCCAGTGATGAGGAAGAG
GCTTACAGCTTTGCGGAAGCGAGGATGCGGTGGGCGAGCGGAGGTCGAGG
CGGAGGCGAAGGCGGAGGGGAGGGTGGCTCAGCAGGCACTGAAAGAGCAT
CAGGTGGCGCAAGCGATGGTAGCAGCGATGGCCACGATAGTGACGAGAGC
GTTGGGCAGATTGACGCCCGGGCTCTCGGGCGGTCAAATGGCGGTGGCAG
CAGTTCAAAGGCTGCCAAAGACGATGGGAGTCACGATAGCAGCAGCGACG
ACAGCAGCAGCGATAGTTGCAGTAGCGACGCGGGGGAGAGGACGCCCGTG
AGAGAAGAAAACCACGCGTCTCGGCCGCCGGCAACATCGCCTCCACAAGG
GTCAGACGACGACGAGGATAGCGGCGATGACATCGATCTAAACGACGACT
TCTTCATGGAAGAGAAGGGAACCGGCGCCGGAGAAGAGACAAACAACGGA
ATGGTGGCCACCACCCCTGCCGCCGGCGGCAAAAATGCTCGCGCCAGACG
TGACGAACGGAGAAATACTAGCGGCCGAGGCGGTGGCGGCGGCCGCGTTG
GCGGGGGTCGTGGGCACCGCACCGGAAGGGGGGGGCGGGGGCGACACGGC
CCAGGAAGAGGGGGTTACGAACGGGGTCGAGGGCGATCTTCTTTTGGCTC
CGGTGGCGGCCGGGCGGCAGAACGAGGATTTAGTGCGGATTACGACCCGT
CGAAGTCTTCGAATGGTGGAACGGGGGGGCGAGGGGGCACCGGGCGGGCG
TGGGTGCCGCACGGG

Coding sequence (CDS) from alignment at P-littoralis_Contig12:201772..206286+

>mRNA_P-littoralis_Contig12.41.2 ID=mRNA_P-littoralis_Contig12.41.2|Name=mRNA_P-littoralis_Contig12.41.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2010bp|location=Sequence derived from alignment at P-littoralis_Contig12:201772..206286+ (Pylaiella littoralis U1_48)
ATGCCACACACAAATCGGGCGAGGCGTGCCGACCATTTTCGCTCCATTGA
CAACACCAACAGCAACAGCAGTAATGTGAACACAAGTAAACCAGGAGGCA
GACGGCACTCGCAGCATGGACAAGACGATGGGGGTGCCTTTGACCACGAT
CTCGGCAGCAGAAACGACGCTCCAGAGCGCTTTGGTGGTCGAAGTGCTGG
TCGTGGTGCAGGAGGGCGCGGAGCAGGTCGCGGTGGGCAAGGAGGAGCCT
TCGGAAGGGGTGGTGGTGCGCGGGCAGCAAGAGGACCAGTAGCAGGTGCA
CCAACAACAGCAGCAGCCGGAGGCAAGGGAAAGAGCAGGACGCCCTCGAT
GAAGAACCGCATCAGGAGCTTGACACGGCTCATGAACAGACCTGGCATCG
AAGAGGAACAGCGACTACACTTGAAAACTCAGGTGGAAGAGCTGGAGGGA
AAATTTTCGGAGCGGCAAAAACATGAGCGCGAACGAACCCTTGCCATCAA
GTACCACAAGGCAAAGTTCTTCGACCGCAGGAAAGCTCTCCGTCGGCTGG
CCCAAATCCACCGGAAGCTTCAGGGGGACATCGAGGAGGCGGTGCGAGCG
GAGCTAGAGAGAAATCGTGAAAGCGAGGAGGCGGACCTGAAGTACGTCCT
GTACTTCCCTAAGGACAAAAAGTACCTACCGCTGGGAAAGGGCAAAGAAG
GACCTCCGCGCGCGCAGCGCTCCCACGAGCGCTTCCTCAAGGAGGCTTTG
GCACGCGGGGAGGCCGCCGGATGGACGGAGTTCCAGGACAATCTCAACAA
GTTTGTCACCAGCAGTGCGGGGGGCGGTCCAGAGAGAGCGGCCCCCTCTC
CCTCGTTGGAGGCCGAGGATGCGAACGCTGGCGACGGGCGTGGCTTGAAG
AGGAAGAAGGAGATTGACTCGCTCCCGGTGGTGGCCCAGGAAAACATTTG
GAATGAAGAGGATGACAGGAGCAGCAAGGAGCAGGAGGAGGAGGAGGAGG
GAGAGGGAGGTGAAGAGGGGGATGCCGTCAACGCGGGAGATGATGAAGTA
GCCGGGGCAGAAGCCGCGCCGGCGGCAACGGACACTGCTTCGGCGCTCCT
CCGCAAGAAGAGCAGCAAGGATAAGAAAAATTTGTCGGCGCAAGTGGAAT
CGGGACCGAGGACGTCGCAGCCTGAAAGCTCTGATTCGGAAGGCGAGCTC
AGCGGAGACGAGGGCTTCGGAGCGGCGGCCAGTGATGAGGAAGAGGCTTA
CAGCTTTGCGGAAGCGAGGATGCGGTGGGCGAGCGGAGGTCGAGGCGGAG
GCGAAGGCGGAGGGGAGGGTGGCTCAGCAGGCACTGAAAGAGCATCAGGT
GGCGCAAGCGATGGTAGCAGCGATGGCCACGATAGTGACGAGAGCGTTGG
GCAGATTGACGCCCGGGCTCTCGGGCGGTCAAATGGCGGTGGCAGCAGTT
CAAAGGCTGCCAAAGACGATGGGAGTCACGATAGCAGCAGCGACGACAGC
AGCAGCGATAGTTGCAGTAGCGACGCGGGGGAGAGGACGCCCGTGAGAGA
AGAAAACCACGCGTCTCGGCCGCCGGCAACATCGCCTCCACAAGGGTCAG
ACGACGACGAGGATAGCGGCGATGACATCGATCTAAACGACGACTTCTTC
ATGGAAGAGAAGGGAACCGGCGCCGGAGAAGAGACAAACAACGGAATGGT
GGCCACCACCCCTGCCGCCGGCGGCAAAAATGCTCGCGCCAGACGTGACG
AACGGAGAAATACTAGCGGCCGAGGCGGTGGCGGCGGCCGCGTTGGCGGG
GGTCGTGGGCACCGCACCGGAAGGGGGGGGCGGGGGCGACACGGCCCAGG
AAGAGGGGGTTACGAACGGGGTCGAGGGCGATCTTCTTTTGGCTCCGGTG
GCGGCCGGGCGGCAGAACGAGGATTTAGTGCGGATTACGACCCGTCGAAG
TCTTCGAATGGTGGAACGGGGGGGCGAGGGGGCACCGGGCGGGCGTGGGT
GCCGCACGGG