prot_P-littoralis_Contig12.40.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig12.40.1
Unique Nameprot_P-littoralis_Contig12.40.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length301
Homology
BLAST of mRNA_P-littoralis_Contig12.40.1 vs. uniprot
Match: D8LAU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU5_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 1.730e-148
Identity = 211/248 (85.08%), Postives = 226/248 (91.13%), Query Frame = 0
Query:   53 MSSSQSEKAQDFLDRFVTFVASTYSNDKCIKLLGYSLSTVAQVVRYQNGGKHTQRSEGLNQLYLALSAARVVFRMQGTAEAVWEMKHLSGAEGWKDPKIRPLAWLQALTNVFYHPMEEVALAGSIAPKLFPVDQAWWWARSDWAWLAFCIIDAFMNVLKGRELRRREEGVRKKLRDCAESEKTGLRGELSAIAAGKWRVALQQWRMVFYLPNAVHWAFIEPLMHPLVVAVLGLGEAAVGAVQAFPPAK 300
            MSSSQSE A+DFLDRFVTFVA TY NDKCIKLLGYSLST+AQ++RY+NGGK T+RSEGLNQLY ALS ARV+FRMQGTAEAVWE+KHLSGA+GW D +IRPLA LQALTNVFYHPMEEVALAG IAPKLFPVDQAWWWARSDWAWLAFCIID +MNVLKGRELRRREEGVR+KLRDCAESE  GLR  LS IAA K +VALQQ RMVFYLPNAVHWAFI+P +HPLVVA LGLGEAAVGAVQAFPPA 
Sbjct:    1 MSSSQSEGAKDFLDRFVTFVAGTYRNDKCIKLLGYSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVIFRMQGTAEAVWELKHLSGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQAWWWARSDWAWLAFCIIDMYMNVLKGRELRRREEGVRRKLRDCAESETAGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAFIKPPVHPLVVAALGLGEAAVGAVQAFPPAS 248          
BLAST of mRNA_P-littoralis_Contig12.40.1 vs. uniprot
Match: A0A835YVI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI8_9STRA)

HSP 1 Score: 178 bits (452), Expect = 2.170e-51
Identity = 91/234 (38.89%), Postives = 145/234 (61.97%), Query Frame = 0
Query:   65 LDRFVTFVASTYSNDKCIKLLGYSLSTVAQVVRYQNGGKHTQRSEGLNQLYLALSAARVVFRMQGTAEAVWEMKHLSGAEGWKDPKIRPLAWLQALTNVFYHPMEEVALAGSIAPKLFPVDQAWWWARSDWAWLAFCIIDAFMNVLKGRELRRREEGVRKKLRDCAESE-KTGLRGELSAIAAGKWRVALQQWRMVFYLPNAVHWAFIEPLMHPLVVAVLGLGEAAVGAVQAFP 297
            LD++V + ++ + +DK +K  GY+ S++A V+R  NGGK T  +EGL++LY  +   R + R  GT +A+  +++ S    WKD +IR L   QA T + YHPME V     I PKL P++  WW+A++ + W+A+ + D ++++LK +EL+R +     +L   A+ E +   +  ++A  A +  V LQ WR +FYLPNA+HW+F++P++    VA LGL EA VG  Q FP
Sbjct:   11 LDKYVGYTSAYFYHDKVLKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAAALQLEQAADDEARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFP 244          
BLAST of mRNA_P-littoralis_Contig12.40.1 vs. uniprot
Match: L1IT62_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IT62_GUITC)

HSP 1 Score: 83.6 bits (205), Expect = 2.950e-15
Identity = 71/230 (30.87%), Postives = 105/230 (45.65%), Query Frame = 0
Query:   74 STYSNDKCIKLLGYSLSTVAQVVRYQNGGKHTQRSEGLNQLYLALSAARVVFRMQGTAEAV-WEMKHL---SGAEGWKDPKIRPLAWLQALTNVFYHPMEEVALAGSIAPKLFPVDQAWWWARSDWAWLAFCIIDAFMNVLKGRELRRREEGVRKKLRDCAESEKTGLRGELSA-----IAAGKWRVALQQWRMVFYLPNAVHWAFIEPLMHPL---VVAVLGLGEAAVG 291
            S +  DK +K+  Y L  VAQ   +    +     E L       S  RV  R+ G+   +  E+ ++   S   GWKD  IR    LQ+ T + Y+P+E    AG+IAPKLFP+D A     S   W+ + +ID +    + +EL+R E  ++             + G L+A     I   +  +     R+V YLPNA+HW   E     L   +V  LGL EA +G
Sbjct:   10 SVWGYDKAMKIASYLLPLVAQTCPH----RLQTLKEALKLFGSHFSMYRVTTRLGGSPFGLPSELDNIINSSWVGGWKDNVIRRCVILQSYTMLGYYPLEHAVWAGTIAPKLFPLDVATLSRLSCVFWVLWIVIDIYATHRRWQELKRMETKLK-------------MNGSLTANNKAKIERSRRSLIRYTLRLVLYLPNAIHWTLDEKSKFALADWMVNALGLAEAVLG 222          
BLAST of mRNA_P-littoralis_Contig12.40.1 vs. uniprot
Match: A0A7S0M254_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M254_9CRYP)

HSP 1 Score: 65.9 bits (159), Expect = 1.780e-9
Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 0
Query:   53 MSSSQSEKAQDFLDRFVTFVASTYSNDKCIKLLGYSLSTVAQVVRYQNGGKHTQRSEGLNQLYLALSAARVVFRMQGTAEAV----WEMKHLSGAEGWKDPKIRPLAWLQALTNVFYHPMEEVALAGSIAPKLFPVDQAWWWARSDWAWLAFCIIDAFMNVLKGR 213
            MSS  S   Q  L + V F +S +  DK +K   Y+   +A     Q  G  +  +EGL QL   LS  R+  R+ G    V      M + S   GW+D +I+   W Q++T + Y+P+E +A AG IAP+LFPV+       S   W+ + +ID +   L+ R
Sbjct:    1 MSSVNSAPVQ-LLMQVVDFHSSVFGWDKTMKNFCYAFG-LASCAASQIYGPKSALAEGLKQLGSNLSMYRMCTRIGGGPFGVPPELENMINHSWYGGWEDKRIKWCVWWQSVTMLGYYPLENLAWAGYIAPRLFPVNADKLCQASCVFWVLWILIDIYATRLRLR 163          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.40.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LAU5_ECTSI1.730e-14885.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVI8_9STRA2.170e-5138.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L1IT62_GUITC2.950e-1530.87Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0M254_9CRYP1.780e-933.33Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008733Peroxisomal biogenesis factor 11PFAMPF05648PEX11coord: 65..294
e-value: 1.0E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR12652PEROXISOMAL BIOGENESIS FACTOR 11coord: 54..294
NoneNo IPR availablePANTHERPTHR12652:SF25MICROBODY (PEROXISOME) PROLIFERATION PROTEIN PEROXIN 11C (EUROFUNG)-RELATEDcoord: 54..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:194143..201667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.40.1mRNA_P-littoralis_Contig12.40.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig12 194143..201667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig12.40.1 ID=prot_P-littoralis_Contig12.40.1|Name=mRNA_P-littoralis_Contig12.40.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=301bp
WNAATAVARRDQAWSWIPGFWASLGSGRRGEVAHQKFQAVRHRRSRKESS
IVMSSSQSEKAQDFLDRFVTFVASTYSNDKCIKLLGYSLSTVAQVVRYQN
GGKHTQRSEGLNQLYLALSAARVVFRMQGTAEAVWEMKHLSGAEGWKDPK
IRPLAWLQALTNVFYHPMEEVALAGSIAPKLFPVDQAWWWARSDWAWLAF
CIIDAFMNVLKGRELRRREEGVRKKLRDCAESEKTGLRGELSAIAAGKWR
VALQQWRMVFYLPNAVHWAFIEPLMHPLVVAVLGLGEAAVGAVQAFPPAK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008733PEX11