prot_P-littoralis_Contig80.81.16 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig80.81.16
Unique Nameprot_P-littoralis_Contig80.81.16
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length134
Homology
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BLAST of mRNA_P-littoralis_Contig80.81.16 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 3.760e-21
Identity = 64/123 (52.03%), Postives = 80/123 (65.04%), Query Frame = 0 
Query:    7 VEEADRTGVGFGAIDEWVARHPFSFLGKVLFG--SGFVLKGENDGVSRRAKVMIRAVGETLVVDSLFLALSVVSGGW-DGNLTGVAGISALFSVLELLTELQYYVAEVGAVL-----EPISSS 121
            V+  +++G G   ID  V  HP+S LG+ LF    G  L G +D  +RR+ VM+RAVGETLVVDSLFLALS+ S  W DG   G+   S +FSVLELLTELQYYV+E  A +     EP S+S
Sbjct:  316 VDRLEQSGFGLSLIDRIVDHHPYSLLGRALFSYPHGHHLPG-SDEATRRSWVMVRAVGETLVVDSLFLALSLSSETWEDGVSIGI--FSLIFSVLELLTELQYYVSEARADMVTGGEEPTSTS 435
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BLAST of mRNA_P-littoralis_Contig80.81.16 vs. uniprot
Match: A0A6H5JME9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME9_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.250e-18
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:   54 AKVMIRAVGETLVVDSLFLALSVVS-GGWDGNLTGVAGISALFSVLELLTELQYYVAEVGAVLEPI 118
            A+VM+R+VGETLVVD LFLALS VS GGWDG+L G+AGISA+FS L+LLTEL+YYV    AVLE +
Sbjct:  312 ARVMVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELRYYVKGASAVLERV 377
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig80.81.16 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFA4_9PHAE3.760e-2152.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JME9_9PHAE1.250e-1871.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig80contigP-littoralis_Contig80:563945..564346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig80.81.16mRNA_P-littoralis_Contig80.81.16Pylaiella littoralis U1_48mRNAP-littoralis_Contig80 562839..564682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig80.81.16 ID=prot_P-littoralis_Contig80.81.16|Name=mRNA_P-littoralis_Contig80.81.16|organism=Pylaiella littoralis U1_48|type=polypeptide|length=134bp
MSLDAKVEEADRTGVGFGAIDEWVARHPFSFLGKVLFGSGFVLKGENDGV
SRRAKVMIRAVGETLVVDSLFLALSVVSGGWDGNLTGVAGISALFSVLEL
LTELQYYVAEVGAVLEPISSSSTAISGNSIPNV*
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