prot_P-littoralis_Contig80.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig80.42.1
Unique Nameprot_P-littoralis_Contig80.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length138
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig80.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 93..109
e-value: 5.1
score: 6.9
coord: 69..85
e-value: 0.021
score: 21.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 68..83
score: 9.899961
NoneNo IPR availableGENE3D4.10.60.10coord: 61..118
e-value: 2.1E-9
score: 39.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..61
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 60..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig80contigP-littoralis_Contig80:325953..326366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig80.42.1mRNA_P-littoralis_Contig80.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig80 325953..326366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig80.42.1 ID=prot_P-littoralis_Contig80.42.1|Name=mRNA_P-littoralis_Contig80.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=138bp
SSLTRDEIIRVTGTRYRNLRLRHDAAKEKTGVKNVAFLVNGGGASSERHN
KSKKGNGGGGKSGGEDSRRCYKCYRKGHISRDCETKPSDFLEKCKACDGY
GHGKEKCPSGMEKANVAMAFMGPAKEEYDPDVEADAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf