mRNA_P-littoralis_Contig80.39.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: A0A6H5K4S3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4S3_9PHAE) HSP 1 Score: 667 bits (1721), Expect = 1.390e-228 Identity = 377/642 (58.72%), Postives = 432/642 (67.29%), Query Frame = 1
Query: 19 TSQAMSSHTTVERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTSQESARTPTRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNS-ASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNV----------------------------FSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCESPSGRAEDARLEAYACPDRTCAGLCLVPTKRGDVLGGHSSSSSSNAHHQDQSPLPPSDRGSGALQGEPAGPEGTASGVAVGRRQEGNSFHLSSLHPPLSEVSVGVEAD-EGLDPDRLKCCKCGSASRRVEEAQREREGIQELLKRGKAFEEAGEDLAARGSLEQALRRAGTCLHRGNWVLTEIYSTLTSVCVGLRDFDAAAGYASESVDVSRACLAGLIPYFEPWGSRLAFAGKLLLCVRRQPEKALPLLLEAEASIKVTHGVSHPVYASVRDLLDQAE 1854
T+ M ++T VERRPGRGRC++AAKN G GDLIMAV+PLSAVLEE QAR +CA CF+++D QH GGRG RI YCSRKCQK DWREHR ECKAW S SARTPTRTLRLAGRILN +NR ++ + G S G + DDG+S A REAVDELV HND+RSPEQK++YMLMA FVARLC+AG G K+GSAL WPS+ GRG+PGLVDA +AVLGKLSCNV FSI G VGCGLYL+AAAANHSC P+A+QSF GKTLSLRCTRPI +GEEITIGITQI +PGP RRESLR +YFFECRCERCESP GRAED RLEA+ACP C G CL P KRG LG SS + Q++S P S +G E V Q+ +LSSLH PLSEV G+E + EG RL C CG++SR VEEA+ E IQELL R KAF G+ L AR LEQAL +A LHR NW+L+EIY L SVCV L+DFDAAA YAS+ +D SRACL+GL+PYFEPWG LA GKLLL VRRQPEKA+PLLLEAEASIKVTHG H +Y VR +LDQA+
Sbjct: 6 TTLTMPANTAVERRPGRGRCLIAAKNLGLGDLIMAVQPLSAVLEESQARTHCARCFESMDKQHSGGRGSRCSGC---SRICYCSRKCQKADWREHRPECKAWASNSSARTPTRTLRLAGRILNAINRSDNGNTG---------SMGTVNGGEDDGSSHAPSVREAVDELVHHNDDRSPEQKEEYMLMANFVARLCLAGCGDS-------------KKGSALLWPSSQGRGLPGLVDAAYAVLGKLSCNVRNLRRLRSNTHVLSPTISLLMASSSRQVFSIAESALNGEVGCGLYLEAAAANHSCNPNAAQSFSGKTLSLRCTRPIRKGEEITIGITQIQKPGPARRESLRKTYFFECRCERCESPEGRAEDMRLEAFACPGSECTGFCLAPKKRGRALG-----ESSKSFRQEKSASPSSYQGFEFPLEE--------CNVEPSEEQQAAGLNLSSLHSPLSEVVAGLETEREGSA--RLTCDACGASSRPVEEARAELANIQELLNRVKAFGYEGQALPARRCLEQALGKAAHSLHRANWMLSEIYGLLASVCVELQDFDAAATYASDGMDASRACLSGLMPYFEPWGCNLAITGKLLLYVRRQPEKAMPLLLEAEASIKVTHGDQHSLYREVRGMLDQAK 607
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: UPI00053FAE06 (histone-lysine N-methyltransferase ASHR1 isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FAE06) HSP 1 Score: 128 bits (321), Expect = 1.620e-27 Identity = 106/357 (29.69%), Postives = 152/357 (42.58%), Query Frame = 1
Query: 46 TVERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTS--QESARTPTRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCESPSGRAED----ARLEAYACPDRTCAGLCL 1098
TV P +GRC++AAKNF PG++I++ EP +V + C CF T + + +WYC R CQK DW HR EC+ + +E + T ++RL ++ L RR+ DE + V D+ N V+ LV H + +Q Y MA V + L WP + + KL+CN SI E +G GLY + NHSC P+A F+G+T +R + I +G E+ I + + TR+++L+ YFF C C RC G+ ED A LE Y C D TC G L
Sbjct: 14 TVSFLPEKGRCLLAAKNFSPGEIIISQEPCISVPNNSSGVSRCEVCFATANVKK----------CSACHLVWYCGRTCQKADWTLHRVECQTLSKLGKERQKYLTPSIRL---MVKLYLRRKLQDEKV-----------IPTTVTDNYN-------LVEALVSHMPDMDEKQLLLYAQMANLVNVI--------------------------LQWPDL-------KLKEIAENFSKLACNAHSICD-PELRPLGTGLYPVISVINHSCFPNAVLMFEGRTAVVRAVQCIPKGTEVLISYIETAASTMTRQKALKEQYFFSCSCPRCMK-LGQNEDIQESAILEGYRCDDYTCMGFLL 304
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: A0A7C9EHD4_OPUST ([histone H3]-lysine(4) N-trimethyltransferase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EHD4_OPUST) HSP 1 Score: 114 bits (285), Expect = 9.770e-24 Identity = 99/356 (27.81%), Postives = 149/356 (41.85%), Query Frame = 1
Query: 49 VERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTSQESARTP--TRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCESPSGRAED----ARLEAYACPDRTCAGLCL 1098
V P +GRC++A K+F PG++I++ EP V + C CF + + + +WYC CQK DW+ HR EC+A ++ E + T ++RL ++ L RR+ E + V D+ N ++ LV H E + +Q Y MA V + L WP + V KL+CN SI +E +G GLY + NHSC P++ F+G+T +R I +G E+ I + + TR+++L+ Y F C C RC G++ED A LE Y C D C G L
Sbjct: 15 VSNLPEKGRCLMATKDFSPGEVIISQEPYVFVPGNASGSSKCEVCFGSDNVKK----------FSACHVVWYCGSTCQKADWKLHRAECQALSNIEKDKLKYLTPSIRL---MVKLYLRRKLQAEKV-----------IPTTVTDNYN-------LIEALVSHMSEIAEKQLVLYAQMANLVNVI--------------------------LQWPDLN-------LKEVAENFSKLACNAHSICD-SELRPLGTGLYPVVSIINHSCLPNSVLVFEGRTAVVRAVERIPKGTEVQISYIETAGSTMTRKKALKEQYLFSCSCPRCMK-LGQSEDIQESAILEGYRCEDDNCMGFLL 304
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: A0A2P2KVS7_RHIMU (Uncharacterized protein MANES_18G073800 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KVS7_RHIMU) HSP 1 Score: 114 bits (284), Expect = 2.180e-23 Identity = 94/355 (26.48%), Postives = 141/355 (39.72%), Query Frame = 1
Query: 49 VERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTSQESARTP--TRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCES---PSGRAEDARLEAYACPDRTCAGLCL 1098
V PG+GRC++A K+F PGD I+ EP V + A C GCF + + + + +WYC CQ +W+ HR EC E+ + T ++RL ++ + + + D DN V+ELV H + +Q Y MA V + L W + + K +CN +I +E VG GLYL + NHSC P+A F+G++ +R + I G E+ I + + TR+++L+ YFF C+C RC P E A LE Y C D C G +
Sbjct: 30 VSNLPGKGRCLLANKDFSPGDAILRQEPYVCV-PNNSAEPRCDGCFASGNLKK----------CSACQVVWYCGSSCQTLEWKSHRLECSVLAKLENDKRKCVTPSVRLMVKLY-VKRKLQSDKIIPATSIDN--------------------YNLVEELVSHIKDLDEKQLVLYAQMANLVNLI--------------------------LQWSDIN-------IKEIAENFCKFACNAHTICD-SELRPVGTGLYLIVSIINHSCSPNAVLVFEGRSAVVRAVQNIPTGAEVLITYIETAGSTVTRQKTLKEQYFFTCKCPRCIKAGHPEDVEESAILEGYRCKDDRCNGFLM 318
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: A0A834WRR1_9FABA (Histone-lysine N-methyltransferase ASHR1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WRR1_9FABA) HSP 1 Score: 114 bits (286), Expect = 4.520e-23 Identity = 95/360 (26.39%), Postives = 149/360 (41.39%), Query Frame = 1
Query: 46 TVERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTS--QESARTPTRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCESPSGRAEDAR----LEAYACPDRTCAGLCLVPT 1107
TV +GRC++A ++F PG++I++ EP V + C GCF T + + G + +WYC KCQK DW+ HR EC+ + ++ ++ T ++RL ++ L RR+ E T A V LV H + + EQ Y MA V + L WP + + K +CN +I +E +G GLY + NHSC P++ F+GK+ +R + I +G E+ I + + TR+++L+ Y F C C RC G+ +D + LE Y C + C G L T
Sbjct: 14 TVSTIADKGRCLLATRDFYPGEVIISQEPYVCVPNKSSVETRCDGCFATSNLKKCSG----------CQVVWYCGSKCQKSDWKLHRLECEVLSKLDKDKRKSVTPSIRL---MVKLYLRRKLQSEKIIPST------------------AIDNYNLVGALVAHMSDINEEQLVLYAQMANLVKII--------------------------LQWPEID-------IKEIAENFSKFACNAHTICD-SELRPLGTGLYPVISIINHSCLPNSVLVFEGKSAIVRAVQHIPKGSEVLISYIETAGSTMTRQKALKDQYLFTCTCPRCVK-LGQYDDVQESAILEGYRCKNEKCCGFLLRKT 307
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: A0A7C9ADA9_OPUST ([histone H3]-lysine(4) N-trimethyltransferase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ADA9_OPUST) HSP 1 Score: 114 bits (285), Expect = 6.110e-23 Identity = 99/356 (27.81%), Postives = 149/356 (41.85%), Query Frame = 1
Query: 49 VERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTSQESARTP--TRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCESPSGRAED----ARLEAYACPDRTCAGLCL 1098
V P +GRC++A K+F PG++I++ EP V + C CF + + + +WYC CQK DW+ HR EC+A ++ E + T ++RL ++ L RR+ E + V D+ N ++ LV H E + +Q Y MA V + L WP + V KL+CN SI +E +G GLY + NHSC P++ F+G+T +R I +G E+ I + + TR+++L+ Y F C C RC G++ED A LE Y C D C G L
Sbjct: 15 VSNLPEKGRCLMATKDFSPGEVIISQEPYVFVPGNASGSSKCEVCFGSDNVKK----------FSACHVVWYCGSTCQKADWKLHRAECQALSNIEKDKLKYLTPSIRL---MVKLYLRRKLQAEKV-----------IPTTVTDNYN-------LIEALVSHMSEIAEKQLVLYAQMANLVNVI--------------------------LQWPDLN-------LKEVAENFSKLACNAHSICD-SELRPLGTGLYPVVSIINHSCLPNSVLVFEGRTAVVRAVERIPKGTEVQISYIETAGSTMTRKKALKEQYLFSCSCPRCMK-LGQSEDIQESAILEGYRCEDDNCMGFLL 304
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: A0A2R6WEI7_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WEI7_MARPO) HSP 1 Score: 114 bits (284), Expect = 8.180e-23 Identity = 89/351 (25.36%), Postives = 144/351 (41.03%), Query Frame = 1
Query: 67 RGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWT--SQESARTPTRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDA--VFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERC---ESPSGRAEDARLEAYACPDRTCAGLCL 1098
+GRC+VA ++F PG++++ EP S+VL+ + C CF+ + K + YC CQ+ +W+ H+ EC+ SQ + P +LRL R++ + R + + DN E V+ L H E E+ Y M+ V + P VD + +++CN +I E VG GLY + NHSC P++ FDG+ +R + I RG E+T+ +++ TR+++L+ Y+F C C RC E+ G ED+ LE Y C + C G +
Sbjct: 18 KGRCLVADRDFSPGEIVLDQEPYSSVLDAESKSLRCDACFRCSE---------NLQRCSACKSVSYCCTSCQRKEWKLHKSECQMMVKLSQAKQKLPPPSLRLIVRLV-IKRRLQASNVFPRTNVDN--------------------FEIVEALPTHFSETGEERLVLYAQMSNLVKAIVT-----------------------------------PLEVDLKETCELFCRIACNAHTICD-DEFRPVGTGLYPVVSIINHSCAPNSVLLFDGRRAIVRAIQKIDRGTEVTLSYVELAGSTKTRQKALKEQYYFSCHCTRCMNAETTEGTREDSILEGYKCSNEQCDGAVI 302
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: A0A2P2KVT7_RHIMU (Uncharacterized protein n=3 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KVT7_RHIMU) HSP 1 Score: 114 bits (284), Expect = 9.040e-23 Identity = 94/355 (26.48%), Postives = 141/355 (39.72%), Query Frame = 1
Query: 49 VERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTSQESARTP--TRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCES---PSGRAEDARLEAYACPDRTCAGLCL 1098
V PG+GRC++A K+F PGD I+ EP V + A C GCF + + + + +WYC CQ +W+ HR EC E+ + T ++RL ++ + + + D DN V+ELV H + +Q Y MA V + L W + + K +CN +I +E VG GLYL + NHSC P+A F+G++ +R + I G E+ I + + TR+++L+ YFF C+C RC P E A LE Y C D C G +
Sbjct: 30 VSNLPGKGRCLLANKDFSPGDAILRQEPYVCV-PNNSAEPRCDGCFASGNLKK----------CSACQVVWYCGSSCQTLEWKSHRLECSVLAKLENDKRKCVTPSVRLMVKLY-VKRKLQSDKIIPATSIDN--------------------YNLVEELVSHIKDLDEKQLVLYAQMANLVNLI--------------------------LQWSDIN-------IKEIAENFCKFACNAHTICD-SELRPVGTGLYLIVSIINHSCSPNAVLVFEGRSAVVRAVQNIPTGAEVLITYIETAGSTVTRQKTLKEQYFFTCKCPRCIKAGHPEDVEESAILEGYRCKDDRCNGFLM 318
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: UPI0010A471A2 (histone-lysine N-methyltransferase ASHR1-like isoform X2 n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A471A2) HSP 1 Score: 107 bits (268), Expect = 6.910e-21 Identity = 90/357 (25.21%), Postives = 146/357 (40.90%), Query Frame = 1
Query: 46 TVERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKTIDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTSQESARTP--TRTLRLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCESPSGRAEDAR----LEAYACPDRTCAGLCL 1098
TV +GRC++A ++F PGD+I++ EP A C GCF T + G + +WYC CQ+ +W+ HR EC+ + E + T ++RL ++ L RR+ E T A+ V+ LV H + + Q Y MA V + L WP + + + +CN +I +E +G GLY + NHSC P++ F+G++ +R + I +G E+ I + + TR+++L+ Y F C C RC + G+++D R LE Y C + C G +
Sbjct: 20 TVSTVADKGRCLLATRDFYPGDVIISQEPYVCAPNNSSAETRCDGCFATSKLKKCSG----------CQVVWYCGSTCQRAEWKLHRLECEVLSRLEKDKRKFVTPSIRL---MVKLYLRRKLQSEKVIPST------------------ATDNYSLVEALVAHMSDINEGQLVLYAQMANLVNLI--------------------------LQWPEIN-------IKEIAENFSRFACNAHTICD-SELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCTCPRC-ARMGQSDDIRESAILEGYRCKNEKCYGFLM 310
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Match: D0NK15_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NK15_PHYIT) HSP 1 Score: 106 bits (264), Expect = 1.480e-20 Identity = 91/352 (25.85%), Postives = 149/352 (42.33%), Query Frame = 1
Query: 40 HTTVERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGCFKT-IDCQHGGGRGXXXXXXXXXKRIWYCSRKCQKWDWREHRQECKAWTS-QESARTPTRTL--RLAGRILNLMNRREDDDEGAGNETDNGASAGAGSAVHDDGNSASKTREAVDELVDHNDERSPEQKQQYMLMATFVARLCVAGSGXXXXXXXXXXXKGKGKRGSALSWPSAGGRGIPGLVDAVFAVLGKLSCNVFSIVGGTEGGTVGCGLYLDAAAANHSCRPDASQSFDGKTLSLRCTRPISRGEEITIGITQISRPGPTRRESLRTSYFFECRCERCESPSGRAEDARLEAYACPDRTC 1083
H V+ R +GRC VA+ G ++ AV + + C CF + Q G +++ YCSR+CQK DW +HR+EC+AW S A PT L RLA ++ L ++ + +D + + L H D+ + ++QQ+ V L + K PS L + + G++SCN FSI+ G VG GL+L + NH C P+ SF G+ +++ + + G+E+TI ++ + R++ L+ SYFFEC+C RC + + +D L+ C ++ C
Sbjct: 5 HEVVDAR--KGRCNVASVALRAGSCVLRTPAFCAV-----SSSSCGWCFAPQLSLQRCTG----------CRQVQYCSRRCQKLDWSQHRRECQAWRSIPVDATLPTVLLVCRLAAKLF-LSSKVDQED-----------------------------KNRILNLRHHLDDHTAPKQQQFCETTPLVHLLLS-----------------EYKVDKQEQTPSFAEL-QESLKPEILKLFGQVSCNGFSIMNGVTNEPVGIGLFLQGSMFNHDCDPNCVVSFQGQEMNVHVIKDVKEGQELTISYVEVLQSTKKRQKILKDSYFFECQCSRCTTET--TDDWYLDGLQCGNKGC 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig80.39.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig80.39.4 >prot_P-littoralis_Contig80.39.4 ID=prot_P-littoralis_Contig80.39.4|Name=mRNA_P-littoralis_Contig80.39.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=612bp MSSHTTVERRPGRGRCMVAAKNFGPGDLIMAVEPLSAVLEEDQARAYCAGback to top mRNA from alignment at P-littoralis_Contig80:317249..323958- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig80.39.4 ID=mRNA_P-littoralis_Contig80.39.4|Name=mRNA_P-littoralis_Contig80.39.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=6710bp|location=Sequence derived from alignment at P-littoralis_Contig80:317249..323958- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig80:317249..323958- >mRNA_P-littoralis_Contig80.39.4 ID=mRNA_P-littoralis_Contig80.39.4|Name=mRNA_P-littoralis_Contig80.39.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1836bp|location=Sequence derived from alignment at P-littoralis_Contig80:317249..323958- (Pylaiella littoralis U1_48)back to top |