prot_P-littoralis_Contig80.36.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig80.36.3
Unique Nameprot_P-littoralis_Contig80.36.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length500
Homology
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI)

HSP 1 Score: 668 bits (1724), Expect = 2.240e-237
Identity = 380/510 (74.51%), Postives = 406/510 (79.61%), Query Frame = 0
Query:    1 MARRLAPTLSPTAC-RLVSLLLLLSGCISGFLVGT-PLQQSRPKHAAQQRGVDCLCDTPGESRRTALAPAAAAPAVPTAAVLPRRPRRDAVVALRAATRDVASEEEVEQEPAFNTEVMTVHEEDGGKRLDAFLGGRMPEQSRSYFGGLCQLGMVLVGGTKAKKSAKVEAGQEVEVRFIISPELSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIYPQVEDEHPEWLGATTPRQDDE---------SADNTNSSADAAGGDDVDVPEDLRDYRIS 499
            MA R  P L PTA  R V  L LL G +SGF VGT  +   R KH AQ    D         R  A APA + P      VL  + R +A  A  AA RDVA EEEVE+E AFNTE++TV E +GGKRLD+FLG RMPEQSRSYFGGLCQLGMVLVGG  AKKS KVE GQEVEVRFIISPELSLQGEDIPLDILYED+EIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLE+      S + G G +G+ E   F+SVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISK+YLAVCVGNPG AATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGN DWNRRL+QSTG+TRPLLHARSLEF+HP TGE+VSLAAPLP D+ AVV+RIYPQVEDEHPEWL  TT   DDE         SAD    S+ AA   DVDVPE+LR+YRIS
Sbjct:    1 MAGRSPPLLLPTAVYRAVLFLWLLEGLVSGFFVGTLRVSLPRAKHVAQHGSADF------GQRGGAAAPAVSMP------VLVGQRRCNAGSAALAAARDVAPEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEK------SGADGNG-LGVAEAA-FQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLQDTTATGDDERNSSSVEGGSADEDTDSS-AAARSDVDVPEELREYRIS 489          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 1.400e-132
Identity = 208/359 (57.94%), Postives = 261/359 (72.70%), Query Frame = 0
Query:  104 EVEQEPAFNTEVMTVHEEDGGKRLDAFLGGRMPEQSRSYFGGLCQLGMVLVGGTKA-KKSAKVEAGQEVEVRFIISPELSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIYPQVEDEHPEWLG 461
            + +++  F+  V      D G+R+DAFL  ++P+QSR+YFG LC  G V V G+ A KKS KV AGQ + VRF+ + EL+L  EDIPLD+++ED E++A++KP GMVVHPAPG+WNGTFVNAL+ HL +           +G+V          V  GE    LRPG+VHRLDKGT+GVLLAAK P MQ +L++LF  R++ KTYLAVC GNPG+ A IDVPIGRH  +RQ+MVAVP IQP  R+RRALS V   AFDG LSVAEV IETGRTHQIRVHLQHRRTP++GDE+YGN+DWNRRLQ+  G++RPLLHA  LEF HPTTG  + L APLP D+ ++V+ +YP   +EHP W G
Sbjct:   44 DADEDEIFDVSVFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSK-----------DGSV----------VSLGESG-DLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPGDDA-IDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKR-GISRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVAIEEHPGWFG 378          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 378 bits (971), Expect = 1.850e-124
Identity = 199/348 (57.18%), Postives = 244/348 (70.11%), Query Frame = 0
Query:  114 EVMTVHEEDGGKRLDAFLGGRMPEQSRSYFGGLCQLGMVLVGGTKAKKSAKVEAGQEVEVRFIISPELSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNI-RSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIYPQVEDEHPEWL 460
            E + V EE   KRLDAFL    PEQSRSYFG LCQ G+V VGG   KKS K+ AGQEV V F+ + E++ + EDIPLDILYEDE +IAV+KP GMVVHPAPGSW+GTF NAL FH+  +                  G+ +R+   G+   +LRPGIVHRLDKGT+GVLLA+KN    AKL+E+FA R+I KTYLAVCVGNPG    I+  I RHP++RQ+M  +   Q    R+R A+++V  ++FD +LS+A V IETGRTHQIRVHL HRRTPVLGDE+YGN D NRR  +  G+ RPLLHA  LE  HP TGE +SL AP+P D+  V+ +IYPQVEDE P+ L
Sbjct:   67 ETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSR------------------GEDYRAAGGGD---ALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAKIYPQVEDEQPDML 393          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A7S4JE35_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE35_9STRA)

HSP 1 Score: 298 bits (764), Expect = 6.290e-92
Identity = 183/377 (48.54%), Postives = 219/377 (58.09%), Query Frame = 0
Query:  124 GKRLDAFLGGRMPEQSRSYFGGLCQLGMVLVGGTKA---------KKSAKVEAGQEVEVRFII--SPELSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSVPDGEHNPSL-----------RPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQ-----------------PNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIYPQVEDEHPEWLG 461
            G R+DA LG   P+ SRS  G L   G+V V G            +KS KV  G  + VR I   +PE  +  +DIPLD+L+EDE +I ++K AGMVVHPA G+W+GT VNAL  +L +       SS G G   L EG       DG     L           RPG+VHRLDKGTTGVL+ AK     A L+E FAQRR  K Y+ V VGNPG   TID PIGRHP  RQRM  VP                    P+   RRALS V T+AFDG+LSVAEV IETGRTHQIRVHLQ RRTPV GD+VYG  DWN+RL ++  + RPLLHA  LE  HP TGE ++  APL  D+  +V  I+PQ  +E P+  G
Sbjct:  150 GSRIDAALGALDPDLSRSLCGTLVSDGLVSVAGVSGGDGTPEVVTRKSHKVSGGDVLAVRRIPDETPE-EIVPQDIPLDVLFEDEHMIVLNKAAGMVVHPAAGNWDGTVVNALAHYLAKV------SSHGAGDFVLPEGGTTAEEEDGALGAVLVEGTDGEAQKFRPGVVHRLDKGTTGVLVVAKTREALAALSESFAQRRAKKAYVTVTVGNPGKRVTIDRPIGRHPTHRQRMRVVPEPSRKDLIGRRPAPGAPPRTPSQAGRRALSFVDTLAFDGRLSVAEVRIETGRTHQIRVHLQDRRTPVYGDDVYGLPDWNKRLAKTHSVERPLLHAAKLEIDHPVTGERLTFRAPLAQDMAKIVDGIWPQGREERPDLFG 519          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A2E3M0J3_9BACT (Pseudouridine synthase n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3M0J3_9BACT)

HSP 1 Score: 286 bits (733), Expect = 3.910e-90
Identity = 156/332 (46.99%), Postives = 209/332 (62.95%), Query Frame = 0
Query:  118 VHEEDGGKRLDAFLGGRMPEQSRSYFGGLCQLGMVLVGGTKAKKSAKVEAGQEVEVRFIISPELSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIY 449
            V EE+ G+RLD  L  R  EQSR+YF  L    +VLV G   +K   ++   EVEV FI+SPELSL+ EDIPLDI+YEDE ++A++KPAG+VVHP  G+W+GTF NAL++H +Q                         VPD      LRPGIVHRLDK T+G+LLAAK    Q  L ELF+ R+I K Y A+C+GNPGN   I+ PIGRHP  R++M  + +       R A ++  T+AF+GKLS+ ++ +ETGRTHQIRVH+ H  TP+LGDE YG K  N++ +    + R LLHA+ LE +HP T + + L A LP D   + ++I+
Sbjct:   11 VTEEEAGERLDKVLSKRYTEQSRTYFQYLITEKLVLVNGEPVRKRTALQTNDEVEVEFILSPELSLEPEDIPLDIVYEDEYLLAINKPAGLVVHPGAGNWSGTFANALLYHCKQ-------------------------VPDA--GDQLRPGIVHRLDKDTSGLLLAAKTNMSQQALVELFSSRKIYKEYWAICLGNPGNGR-IEAPIGRHPIHRKKMAVIES------GRSASTIYETIAFNGKLSLVKLILETGRTHQIRVHMLHLGTPILGDETYGRKQMNQKYK----INRQLLHAKHLELEHPITKKNLKLEASLPEDFSKITEQIH 304          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A4D9DAN8_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAN8_9STRA)

HSP 1 Score: 293 bits (749), Expect = 8.350e-90
Identity = 175/388 (45.10%), Postives = 222/388 (57.22%), Query Frame = 0
Query:  126 RLDAFLGGRMPEQSRSYFGGLCQLGMVLVGGTKAKKSAKVEAGQEVEVRFIISPE--LSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGN-AATIDVPIGRHPRDRQRMVAVPTIQPN--------------------------------------------------IRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIYPQVED-EHPEW 459
            R+D FL  R+   SRS    L   G V V G+ A+KS K+  G E+ V    + E    ++ EDIPLD+LYEDE +IAV+K  GMVVHPAPG+ NGTFVNAL+ H+ ++           G +  V G       +G      RPG+VHRLDKGT+GVLLAAK     A L+  FA+RR++KTYLA+ +GNP +  A IDVPIGRHPRDRQRM      + +                                                  +  R+A S V T+AFDG+LSV EV IETGRTHQIRVHLQHRR PVLGDE+YGN  WN R ++  G+TRP+LHA  L   HP TG+ + L AP+PPD+ +V   I+PQV+  E+ EW
Sbjct:   96 RVDRFLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVLQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRG----------GEIEEVVGS------EG------RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASNAQDAVLNYDGYSEDYQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEW 461          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A7W1U2J2_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U2J2_9BACT)

HSP 1 Score: 283 bits (723), Expect = 1.280e-88
Identity = 165/340 (48.53%), Postives = 214/340 (62.94%), Query Frame = 0
Query:  114 EVMTVHEEDGGKRLDAFLGGRMPE-QSRSYFGGLCQLGMVLVGGTKAKKSAKVEAGQEVEVRFIISPELSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIYPQV 452
            E++ V +E+ G+RLD  L  R    +SR+YF  L + G VL+ G  AKK  K  AG E++V F+++PE+ L  E IPLDI++EDE IIA++KP GMVVHPA G+W GTFVNAL++H +Q              +GL       S+P  E +P LRPGIVHRLDK T+G+LLAAK P    +L  +F++R+I K YLAVC+GNPGN  TI  PIGRHP  R+ M  V T +P I   +AL V        K+S+  V +ETGRTHQIRVH +HR TP+LGD VYG++  NR      G+ R LLHA  L+F HP     V L AP+P DL    K  +P+V
Sbjct:    5 ELLVVQDEEAGERLDKILARRFDGIKSRTYFQMLIEEGHVLLNGLSAKKRIKPTAGDEIQVNFVLTPEIGLSPEAIPLDIIFEDEHIIAINKPVGMVVHPAVGNWTGTFVNALLYHCQQ--------------LGL-------SLP--ESSP-LRPGIVHRLDKDTSGLLLAAKTPLAHQRLVAMFSERKIHKEYLAVCLGNPGNL-TISAPIGRHPVHRKLMSVVETGKPAISHLKALEV------KEKISLVRVILETGRTHQIRVHFKHRGTPILGDAVYGSESANREY----GIHRQLLHAHRLQFMHPIHNTPVELTAPIPSDL----KAFFPKV 305          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A7V9UFC7_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7V9UFC7_9BACT)

HSP 1 Score: 283 bits (724), Expect = 1.380e-88
Identity = 157/332 (47.29%), Postives = 215/332 (64.76%), Query Frame = 0
Query:  118 VHEEDGGKRLDAFLGGRMPE-QSRSYFGGLCQLGMVLVGGTKAKKSAKVEAGQEVEVRFIISPELSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQ-KAFSSSSSSSGEGTVGLVEGQGFRSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKR 447
            + E + G+RLD  L  R  E +SR+YF  L +   VLV G + KK  K E G EVEV FI++PE++LQ E+IPLDI+YED+ II ++KPAGMVVHPA G+W GTFVNAL++H ++ +  S S++S+G                      +LRPGIVHRLDK TTG+LLAAK    Q KL ELF+ R+I K Y A+CVG PG+  TID PIGRHP  R+ M  +P        ++A+S+  T+ ++ +LS   + + TGRTHQIRVHL+H  TPVLGD +YG++    R   +  + R +LHA  L+F+HPTTG+L+   APLP ++  ++ R
Sbjct:   10 ISETEAGQRLDKILADRFKELKSRTYFQYLIEEQKVLVNGEQVKKRFKPEFGDEVEVHFILTPEITLQAENIPLDIIYEDDSIILINKPAGMVVHPAAGNWTGTFVNALLYHCQEIEKLSRSANSTG----------------------NLRPGIVHRLDKETTGLLLAAKTEEAQRKLVELFSNRKIIKEYRAICVGKPGDI-TIDQPIGRHPVQRKMMTVLPH-----GGKKAISICKTLNYNSELSFVNIVLVTGRTHQIRVHLKHLNTPVLGDIIYGSE----RANSTFNVNRQMLHAHYLQFEHPTTGKLLEFYAPLPQEMEQILVR 309          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A7X5TFN1_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5TFN1_9BACT)

HSP 1 Score: 281 bits (720), Expect = 4.090e-88
Identity = 151/338 (44.67%), Postives = 213/338 (63.02%), Query Frame = 0
Query:  113 TEVMTVHEEDGGKRLDAFLGGRMPE-QSRSYFGGLCQLGMVLVGGTKAKKSAKVEAGQEVEVRFIISPELSLQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSVP-DGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRI 448
            TE + + E++ G+RLD  L  R  E +SR+YF  L +   VL+ G+  KK  K + G EVE+ F+++PE+ +  E IPLD+LYEDE+I+ V+KP+GMVVHPAPG+W+GTFVNAL++H +Q                         +P D +H   LRPGIVHRLDK T+GVL++AK    Q +L E+FA R + K YLA+C+G+PG    I++PIGRHP+ RQRM  + +       R A ++  T+A DG LS+ ++ + TGRTHQIRVH+QH  TPVLGD  YGN   N++ +    +TR LLHAR + F HP T   +   A +P D+   ++R+
Sbjct:    6 TETIIITEDEAGQRLDKILANRFKEVRSRTYFQSLIRDHNVLLNGSPIKKQVKPQVGDEVEILFVLTPEIDVTPEPIPLDVLYEDEDILVVNKPSGMVVHPAPGNWSGTFVNALLYHCKQ-------------------------LPSDSQH---LRPGIVHRLDKETSGVLVSAKTSQAQQRLVEMFASREVYKEYLAICLGDPGEGE-INLPIGRHPKQRQRMTVLDS-----GGRNARTIFRTLASDGTLSLVDIILATGRTHQIRVHMQHHGTPVLGDSTYGNIQANKKFK----VTRQLLHARKIRFTHPITKREMEFVAEIPSDMATFIQRL 305          
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Match: A0A448ZFJ4_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFJ4_9STRA)

HSP 1 Score: 283 bits (725), Expect = 3.380e-87
Identity = 171/371 (46.09%), Postives = 223/371 (60.11%), Query Frame = 0
Query:  115 VMTVHEEDGGKRLDAFLGGRM-PEQSRSYFGGL----CQLGMVLVGGTKA-----KKSAKVEAGQEVEVRFIISPELS-LQGEDIPLDILYEDEEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVEGQGFRSV---PDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPT--------IQPNIR-------------SRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIYP 450
            ++TV ++  GKR+DA L   + PEQSRS  G L    C   ++   GT+      +K+ KVEAG  ++V          +  ++IPL I+YEDE ++ ++K AGMVVHPA G+W+GT VNAL ++L        ++ S  GT   V+G G  ++    D +   SLRPGIVHRLDKGTTG+L+ +K      KL+E FA R++ KTYLAV VGNPG    ID PIGRHP  RQ+M  VP         I P  R              RRALS V  + FDGKLS+ +V IETGRTHQIRVHLQ R TP+ GD+VYG  DWN+RLQ+  G+ RPLLHA  LE  HP TGE +   AP+  D+ ++ K I+P
Sbjct:   60 IVTVPDKLKGKRIDAVLAKLLEPEQSRSACGNLVADGCVHQIITKNGTENEVLLDRKAFKVEAGMTLKVTLPKKERPDEIIAQNIPLKIIYEDEHMVVINKDAGMVVHPAAGNWDGTVVNALAYYL--------ANDSPYGTGDFVDGDGKSTLIGNDDDDDILSLRPGIVHRLDKGTTGILIVSKTVEALTKLSEAFASRKVKKTYLAVTVGNPGKRVKIDKPIGRHPIHRQKMRVVPDPHRKNSSGISPKDRLRFKNSFQSSSQSGRRALSFVDALQFDGKLSLVQVRIETGRTHQIRVHLQDRHTPIYGDDVYGISDWNKRLQKVHGIERPLLHAHRLEISHPITGEHMVFIAPMSEDMVSIAKGIWP 422          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig80.36.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFM8_ECTSI2.240e-23774.51Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CH15_9STRA1.400e-13257.94Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XXK7_HETAK1.850e-12457.18Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7S4JE35_9STRA6.290e-9248.54Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A2E3M0J3_9BACT3.910e-9046.99Pseudouridine synthase n=1 Tax=Waddliaceae bacteri... [more]
A0A4D9DAN8_9STRA8.350e-9045.10PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A7W1U2J2_9BACT1.280e-8848.53Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A7V9UFC7_9BACT1.380e-8847.29Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A7X5TFN1_9BACT4.090e-8844.67Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A448ZFJ4_9STRA3.380e-8746.09PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 191..450
e-value: 3.6E-64
score: 218.3
NoneNo IPR availablePIRSRPIRSR606225-1PIRSR606225-1coord: 269..449
e-value: 6.5E-38
score: 128.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..499
NoneNo IPR availablePANTHERPTHR21600:SF57RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Dcoord: 118..448
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 118..448
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 6.0
NoneNo IPR availablePROSITEPS50889S4coord: 125..197
score: 11.166479
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 125..208
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 114..177
e-value: 1.0E-12
score: 49.3
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 121..446
e-value: 5.0E-69
score: 230.8
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 199..384
e-value: 2.5E-28
score: 99.2
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 199..422
e-value: 8.76502E-61
score: 195.634
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 271..285
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 125..202
e-value: 0.00269201
score: 34.5326
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 186..449

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig80contigP-littoralis_Contig80:280467..314575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig80.36.3mRNA_P-littoralis_Contig80.36.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig80 280095..314591 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig80.36.3 ID=prot_P-littoralis_Contig80.36.3|Name=mRNA_P-littoralis_Contig80.36.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=500bp
MARRLAPTLSPTACRLVSLLLLLSGCISGFLVGTPLQQSRPKHAAQQRGV
DCLCDTPGESRRTALAPAAAAPAVPTAAVLPRRPRRDAVVALRAATRDVA
SEEEVEQEPAFNTEVMTVHEEDGGKRLDAFLGGRMPEQSRSYFGGLCQLG
MVLVGGTKAKKSAKVEAGQEVEVRFIISPELSLQGEDIPLDILYEDEEII
AVSKPAGMVVHPAPGSWNGTFVNALVFHLEQKAFSSSSSSSGEGTVGLVE
GQGFRSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQ
RRISKTYLAVCVGNPGNAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRA
LSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNKDW
NRRLQQSTGMTRPLLHARSLEFQHPTTGELVSLAAPLPPDLFAVVKRIYP
QVEDEHPEWLGATTPRQDDESADNTNSSADAAGGDDVDVPEDLRDYRIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036986S4_RNA-bd_sf
IPR006225PsdUridine_synth_RluC/D
IPR006145PsdUridine_synth_RsuA/RluA
IPR006224PsdUridine_synth_RluC/D_CS
IPR002942S4_RNA-bd
IPR020103PsdUridine_synth_cat_dom_sf