mRNA_P-littoralis_Contig12.37.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig12.37.2
Unique NamemRNA_P-littoralis_Contig12.37.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A6H5JU59_9PHAE (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU59_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.050e-93
Identity = 164/232 (70.69%), Postives = 183/232 (78.88%), Query Frame = 1
Query:    1 MATDEAKVVDAVPPPPAYYKLFSPDAAL-GVHQPATGAAAGXXXXAG-----SPNVFPLEPPRPPGPGETYTMFGMPYSSEPVTEELLPPEKMVVPPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTSALEAAMLQCASARQGAAACLGLVPSGASDTKE------DSGGVPMDVVDDLGG 660
            MAT+EAKVVDAVPPPPAYYKLFSP A+L G    A+ A A     AG     +PN FPL+PPRPPGPGETY MFGMPYSSEPV +ELLPPEK+VVP +G+AIDFRA LK LLNSIMANYGQFMEMLVSSP+RAHEKLSDVETLFVNFHSLLNRYRAHQARH++LERLR QAE+NDAV S LEAAM QC SA++ A +CLGL   GAS   E        G V MD+ + +GG
Sbjct:    1 MATEEAKVVDAVPPPPAYYKLFSPGASLTGQDVGASAAIAAPGDSAGGAGGTAPNEFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAGLKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAEENDAVMSTLEAAMHQCTSAQESAFSCLGLQEHGASCVAEGERERAQQGRVEMDIDETIGG 232          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: D8LAU4_ECTSI (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU4_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 3.350e-68
Identity = 131/204 (64.22%), Postives = 146/204 (71.57%), Query Frame = 1
Query:  199 MFGMPYSSEPVTEELLPPEKMVVPPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTSALEAAMLQCASARQGAAACLGLVPSGASDTKEDSGG------VPMDVVDDLGGXXXXXXXXXXXXXXXXXXXXXXXXXKGKLRAVEPAGVDESGR*R 792
            MFGMPYSSEPV +ELLPPEK+VVP +G+AIDFRAELK LLNSIMANYGQFMEMLVSSP+RAHEKLSDVETLFVNFHSLLNRYRAHQARH++LERLR QA++NDAV SALEAAM QC SA++GA +CLGL  +GAS   E  G       V MDV + +GG                         KGKL AV    V ESG  R
Sbjct:    1 MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCLGLQENGASGVAEGEGERARQGRVEMDVDETIGGAATTAVGEGGVAGEGVAASEFGKAGKGKLGAVLAPAV-ESGNPR 203          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A6U1QAX8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QAX8_9STRA)

HSP 1 Score: 109 bits (272), Expect = 7.840e-25
Identity = 67/177 (37.85%), Postives = 100/177 (56.50%), Query Frame = 1
Query:   10 DEAKVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGETYTMFGMPYSSEPVTEELLPPEKMVVPPTGEAI-DFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTSALEAAM 537
            DE +VV A+P PP Y+K F  +                         F L+  RPP P  +Y  FG+PYS+E     L+P EK + P   +   +FR+E+++LL SIMANY Q +++L+  PS+   K+ ++E LFVNFHS+LN++R HQAR ++L RL+ Q +      + LE+ M
Sbjct:    3 DELQVVSALPAPPDYFKRFEDE------------------------NFQLK--RPPVPEGSYASFGIPYSAEAFIPTLVPDEKKLGPKQDDLDRNFRSEMQKLLQSIMANYVQLLDILIECPSQQSRKVEELEQLFVNFHSILNQFRQHQAREMVLVRLKRQKKDEQKALAMLESQM 153          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: F0WF41_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF41_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.190e-21
Identity = 63/183 (34.43%), Postives = 102/183 (55.74%), Query Frame = 1
Query:   19 KVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGETYTMFGMPYSSEPVTEELLPPEKMVV--------PPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTSALEAAMLQ 543
            ++V   PPPPA++ L+  D    V+ PA                    PP P  P   Y MFG PYS++ V  +LLP +   +         P  +AID++A+LK+L  S++AN  Q +++L+ +P   +EK+ D+E LFVN H+L+N++R HQAR +I++ LRGQ E+  A  + +   +++
Sbjct:   11 EIVSEFPPPPAFFSLYQID---DVNAPA--------------------PPAPMAPN--YHMFGTPYSTKDVVPDLLPDDSKKLYLSDTSAQDPAPQAIDYKAQLKKLNRSLLANCIQLLDVLIRNPKVFNEKVDDLELLFVNMHNLINKFRPHQAREMIIQLLRGQIEEKQAAINDIRRVLIE 168          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A329SFW2_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFW2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 5.780e-19
Identity = 50/119 (42.02%), Postives = 80/119 (67.23%), Query Frame = 1
Query:  166 PRPPGPGE-TYTMFGMPYSSEPVTEELLP-PEKMVVPPTGE-----AIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQ 501
            P PP P E TY MFG PYS++ V  +LLP P K +  P GE      +D++AE+K++  S++AN+ + +++L+  P+  +EKL DVE LF+N H+L+N +R HQAR  +++ L+ Q ++
Sbjct:   34 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPGKKLYAPQGEDGGGAPVDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 152          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A024GGG9_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGG9_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.410e-18
Identity = 59/176 (33.52%), Postives = 95/176 (53.98%), Query Frame = 1
Query:   19 KVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGP-GETYTMFGMPYSSEPVTEELLPPE--KMVVP------PTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTS 519
            ++V   PPPPA++ L+                           V   + P PP P    Y MFG PYS++ +  +LLP +  K+ +P      P  ++ID++A+LK+L  S++AN  Q +++L+ +P   +EK+ D+E LFVN H+L+N++R HQAR  I+  L+ Q E+  A  S
Sbjct:   34 EIVSEFPPPPAFFSLYQ--------------------------VNNADAPLPPAPMAPNYHMFGTPYSTKDIVPDLLPDDSKKLYLPTLSTQDPKEQSIDYKAQLKKLNRSLLANCIQLLDVLIRNPKLFNEKVDDLELLFVNMHNLINKFRPHQAREHIILMLQSQIEEKQAAIS 183          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: H3GJZ4_PHYRM (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJZ4_PHYRM)

HSP 1 Score: 97.1 bits (240), Expect = 1.420e-18
Identity = 57/170 (33.53%), Postives = 94/170 (55.29%), Query Frame = 1
Query:   10 DEAKVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGE-TYTMFGMPYSSEPVTEELLPPEKMVVPPTGEA-----IDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQ 501
            D  ++V   P PP ++ L+           A G  +G               P PP P E TY MFG PYS++ V  +LLP +K+  P   E      +D++AE+K++  S++AN+ + +++L+  P+  +EKL DVE LF+N H+L+N +R HQAR  +++ L+ Q ++
Sbjct:  148 DTPEIVSEFPAPPKFFALY-----------ADGVESG---------------PAPPEPMEPTYHMFGSPYSTQDVVPDLLPGKKLYAPAGEEGDEDAPVDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINSFRPHQARETVIQMLKTQVQE 291          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A8K1CA38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA38_PYTOL)

HSP 1 Score: 94.0 bits (232), Expect = 2.710e-18
Identity = 59/170 (34.71%), Postives = 95/170 (55.88%), Query Frame = 1
Query:   10 DEAKVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGETYTMFGMPYSSEPVTEELLP-PEKMV-------VP-PTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQ 492
            D  ++V A P PPA++ L++     G   P T                 +EP        TY MFG PYS++ V  +LLP P K +       VP  + E ID++A++K++ +S++AN+ + +++L+  PS  +EKL+D+E LF+N H+L+N +R HQAR  I+  L+ Q
Sbjct:   17 DAPEIVSAFPAPPAFFVLYADGVESGPPPPET-----------------MEP--------TYHMFGTPYSTKDVVPDLLPQPGKKLYLDGKDSVPGESSEVIDYKAQMKKINHSLLANFTELVDVLIKKPSLFNEKLADLELLFLNMHNLINAFRPHQARETIIHMLKTQ 161          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A2P4YE96_9STRA (Mediator of RNA polymerase II transcription subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YE96_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.670e-17
Identity = 57/169 (33.73%), Postives = 97/169 (57.40%), Query Frame = 1
Query:    4 ATDEA-KVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGE-TYTMFGMPYSSEPVTEELLP-PEKMVVPPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQ 501
            A +EA ++V   P PP ++ L+           A G  +G               P PP P E TY MFG PYS++ V  +LLP P++ +     + +D++AE+K++  S++AN+ + +++L+  P+  +EKL DVE LF+N H+L+N +R HQAR  +++ L+ Q ++
Sbjct:  556 AEEEAPEIVSEFPAPPKFFALY-----------ADGVESG---------------PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPDRKLYAQGDDPVDYKAEMKKINRSLLANFVELVDILIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 698          
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A225WFP8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFP8_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.590e-16
Identity = 41/104 (39.42%), Postives = 70/104 (67.31%), Query Frame = 1
Query:  193 YTMFGMPYSSEPVTEELLP-PEKMVVPPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQ 501
            Y MFG PYS++ V  +LLP  EK +     E + ++AE+K++  S++AN+ + +++LV  P+  + KL DVE LF+N H+L+N +R HQAR  +++ L+ Q ++
Sbjct:    5 YHMFGSPYSTQDVVPDLLPHAEKKLYAKNDETVHYKAEMKKINRSLLANFVELVDVLVKKPAMFNAKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 108          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU59_9PHAE1.050e-9370.69Mediator of RNA polymerase II transcription subuni... [more]
D8LAU4_ECTSI3.350e-6864.22Mediator of RNA polymerase II transcription subuni... [more]
A0A6U1QAX8_9STRA7.840e-2537.85Mediator of RNA polymerase II transcription subuni... [more]
F0WF41_9STRA1.190e-2134.43Mediator of RNA polymerase II transcription subuni... [more]
A0A329SFW2_9STRA5.780e-1942.02Mediator of RNA polymerase II transcription subuni... [more]
A0A024GGG9_9STRA1.410e-1833.52Mediator of RNA polymerase II transcription subuni... [more]
H3GJZ4_PHYRM1.420e-1833.53Mediator of RNA polymerase II transcription subuni... [more]
A0A8K1CA38_PYTOL2.710e-1834.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4YE96_9STRA1.670e-1733.73Mediator of RNA polymerase II transcription subuni... [more]
A0A225WFP8_9STRA3.590e-1639.42Mediator of RNA polymerase II transcription subuni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:182882..186434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LAU4
PFAMsMed7
Model size1211
Max annot lvl2759|Eukaryota
KEGG koko:K15148
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000428,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006355,GO:0006357,GO:0006629,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016021,GO:0016298,GO:0016591,GO:0016592,GO:0016787,GO:0016788,GO:0019219,GO:0019222,GO:0030880,GO:0031224,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070847,GO:0071704,GO:0080090,GO:0090575,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141
Exons5
Evalue2.43e-70
EggNOG OGsKOG0570@1|root,KOG0570@2759|Eukaryota
Ec32 ortholog descriptionMediator complex, subunit Med7
Ec32 orthologEc-27_006360.1
Descriptionregulation of transcription by RNA polymerase II
Cds size789
COG categoryK
BRITEko00000,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.37.2prot_P-littoralis_Contig12.37.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig12 182882..186012 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789506.2398517-CDS-P-littoralis_Contig12:182881..1829751680789506.2398517-CDS-P-littoralis_Contig12:182881..182975Pylaiella littoralis U1_48CDSP-littoralis_Contig12 182882..182975 +
1680789506.254404-CDS-P-littoralis_Contig12:183530..1836611680789506.254404-CDS-P-littoralis_Contig12:183530..183661Pylaiella littoralis U1_48CDSP-littoralis_Contig12 183531..183661 +
1680789506.2655299-CDS-P-littoralis_Contig12:184213..1843531680789506.2655299-CDS-P-littoralis_Contig12:184213..184353Pylaiella littoralis U1_48CDSP-littoralis_Contig12 184214..184353 +
1680789506.2748787-CDS-P-littoralis_Contig12:184844..1849351680789506.2748787-CDS-P-littoralis_Contig12:184844..184935Pylaiella littoralis U1_48CDSP-littoralis_Contig12 184845..184935 +
1680789506.2856202-CDS-P-littoralis_Contig12:185679..1860121680789506.2856202-CDS-P-littoralis_Contig12:185679..186012Pylaiella littoralis U1_48CDSP-littoralis_Contig12 185680..186012 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789506.2990131-UTR-P-littoralis_Contig12:186012..1864341680789506.2990131-UTR-P-littoralis_Contig12:186012..186434Pylaiella littoralis U1_48UTRP-littoralis_Contig12 186013..186434 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig12.37.2

>prot_P-littoralis_Contig12.37.2 ID=prot_P-littoralis_Contig12.37.2|Name=mRNA_P-littoralis_Contig12.37.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=263bp
MATDEAKVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGAAAGAGSPNV
FPLEPPRPPGPGETYTMFGMPYSSEPVTEELLPPEKMVVPPTGEAIDFRA
ELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRA
HQARHLILERLRGQAEQNDAVTSALEAAMLQCASARQGAAACLGLVPSGA
SDTKEDSGGVPMDVVDDLGGGGGIGVDGASGMSGVGVGKGNGLGGKGKLR
AVEPAGVDESGR*
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mRNA from alignment at P-littoralis_Contig12:182882..186434+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig12.37.2 ID=mRNA_P-littoralis_Contig12.37.2|Name=mRNA_P-littoralis_Contig12.37.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3553bp|location=Sequence derived from alignment at P-littoralis_Contig12:182882..186434+ (Pylaiella littoralis U1_48)
ATGGCGACCGATGAAGCCAAAGTCGTGGATGCGGTGCCTCCACCCCCTGC ATATTACAAGCTCTTCTCTCCAGACGCTGCATTAGGTGTGCATCGTTGTT TTTAGTTGGAGGTACACGAACAGCAGACATCGCTTGTTCTCTCTGCCGGC AACAGGCATCAGGAACAACAGCGCTTCGTCCAAGCAAGTTTGATAGTAGT CAGTCGCTGTGCAGTTGTCTTGTGCAGCCGGCTTTGGCATCTTGCGAGGT AGCGACGTTTATTGTGATAATAACGACGCGTTCGTTTGGACCACGCCGAC AGCAGTACTGCTGTACAGACGAGCAATATTATTTTTCAAAGCACAGGGTA CAAGATAGTCGGTGCCAAGTGCTCAGTTTAGTCCCCCAAATATTGTTCCC CTCATATCATACATATAATGGTACAGCAACACAGCAAAACCGCTTCTAGG GCAACAGACTGCTGTGTCGCAAAGTGAGGACCAGAAACTGGTGCAGTTGT GGCTTACAATACATGCGGCACGAGCGAAAAATCTGCCCTGGACCATTCTC ACTAGCTCACACTTCCTGTGCCCTGCGGCGTGCTATCATGCGCTGCACTT TTGGCGCAATTTTTCTGCGTTTGGAAAACTGGCGCGAACTCCGCGATAGA GCCGGCAACGGGCGCAGCAGCAGGAGCAGCAGCAGGAGCAGGATCGCCAA ATGTCTTTCCTCTGGAACCACCTCGGCCACCAGGCCCGGGCGAGACATAT ACAATGTTTGGGATGCCTTACAGCTCGGAGGTGAGTGCCTTGATTGCCTT GGTTCCCCCGGACGAGTAGAGAGTTACTGCCACAAGATTCGAAACTTCGT AGCTTGGTATGTGAGTGTACACGACCCTTTTACGCCTACATATTATACGG TACCATATCATACAACCCCTTTACGGGTCACGGCAGTAGATGCGAGGAGT CGCACTGAATGGACGCATCGATAGACGCATATGTTTTCGTCTCCTATTCT ACGTACATGTGAACGAGGGTCTCACTGCCGGACAACGCTTGCGTTTTGGT ACGAGAAATATGAAATGTGTCAAGCTTTGCATTGGAGATTACTGTTGTCT CAGCAGTCAAAAATGTCAAAAATCGTGGTTCTGCGCACATGTCATACCTC ACTGTGGTTTGCAGTGGTGCGAATACTCCCCCTGCCCTATCCTCCACGAA CCGCCTCCAGACTCTAACCGTACTCTTTGTTGATCAGCCCTGCCTCCCCG CCCACTCCCTCCCTCCCCATATGCATGCCCCCCGAACCGGTACCGTGCTG GTCATTGATTCCGTGGTTGTTGGTTCTTCCAGCCGGTCACCGAGGAACTG CTTCCACCAGAGAAGATGGTGGTGCCGCCTACCGGCGAGGCGATCGATTT CCGGGCTGAGCTTAAACGCCTACTCAACAGCATCATGGCCAACTACGGGC AGTTCATGGAGATGCTCGTCAGGTATTTGCGGTTTCAACATGGCGTAACA TTCTAAAGACGTATTTACAATCGGAGAAAAAAGCGTGGGGTGGAGCCAAC GTTTGGTTTTTGCGCGAGTGCAATGCCTTTACCGAGCAGGGGGCTTCCGG CACCGAACGGTACAATCTTGATGCCTGTAACCGGCGCGTTCTGGTCTGCA AGTCTTGAAAAAGCGCTAGAAAGTCGGCGATATTTCAAGCGCAGAGGAAA CGGTTTCAAGCCAGGATTACCCCCCACCGCGGCCGGCCCACAACCGATGT GCCTTCGTCTCGGACGCCACATGTTTATTCCTCTCTTGCGCCCTGGTGTT CCCGAACTCACCAACAAATCGCAGCTCTTTGGTCTATTTATTACCCGTGC TTTCGCAGTGAGTTAGTTTTTACACCCCCTCAACCGCTCGCCTTTTTCTC TTGTTTCCTTCACTAACAATCTTCCCTCTCTATCGCTTCTTATCTTCTTC CTCCGCCCAACAGCTCACCGTCTCGAGCCCACGAAAAACTGTCGGACGTG GAAACCCTGTTCGTAAACTTCCACAGCTTGCTCAATCGGTACCGGGCGCA TCAGGTAAATATCCCTCTCACACCCCCTGCTGCTGGCCGCCAGTCGCGCA TCGCAGATCAAATGCTCCTTGCCGCTTACAATGGTCATCGGGGGCATATT TTTTTTCTCGTACGCCCGCACAGGTATCTTGTTTTTTGTCATGTATGTTT GTCGAGAGGCTCTGGAAAAGGCGATGTTTGAAGACTGCGTATTTGTGTCA GCGTGCTGTTCAGACTGCCCGTTTAGTCTGCTGGGAAGGTAGCGTATCTG TGTGTGTGTTTAATTTTCGTACCAGAAGCGGTCGTGGGAAAGGCTTTCGT GCCGGTTGCATATGCGCTGTACGGTAGAGTCCCTACATTGTTGAACCTGA ACTTGAAGACCCTGCGACAAGATTAATCCGTTCATGCATAGCTCGGAGAA CAAACGAATAAACAGATCGCGTCTCTGCTGTAAGCACACACTTGCGGAAG TGACACCGTCGACGAGAATGGACATGTTTAAATCGTCATCCCCTGGCTAC GTGCCAGCAGAGCTCAATTGAATGAACCCGATGGTCGATCGACTTTTTTA GTGCAATAGGTTTCGGCATATCGTACGTGCTGTACAGCAGCGACGCAGAG TGTGCCGCGCCGGGCAGGGAAATGCGCAGACAATCCGTCACACTAGTTTA TTCAAATGCACACGCATCGATCCGTCTCGCTCGACCCGCTCCCACATCAT GGCCACCGGCGTCCATTGCTGGTCCGAAACATGTTTGTCTTGGGGCAGGC ACGACATCTCATCCTCGAGCGCTTACGCGGACAGGCAGAGCAAAACGATG CCGTGACTTCCGCCCTCGAAGCTGCCATGCTCCAGTGCGCCTCTGCCAGA CAAGGAGCGGCCGCCTGCCTCGGCCTTGTACCTAGCGGCGCAAGCGACAC CAAAGAAGATAGTGGGGGAGTTCCAATGGACGTGGTGGATGATCTAGGGG GAGGAGGGGGCATCGGGGTAGACGGGGCCAGTGGGATGAGTGGTGTTGGC GTCGGGAAAGGCAATGGGTTGGGGGGGAAGGGGAAGTTGCGCGCGGTTGA GCCGGCGGGTGTGGACGAGAGCGGTAGATGACGAGAGGAGGATATCAACC CCCGTGCAAGTACACCCATCCCATGGCAGGAAGTTTCCGAGAAAAGTCTG AGGTCATTCCTCGAGCTTATGGAATACTCCGGTCCTGCTCTCTATCTAGT GTACGAAGTATTTTCTATTTTCGGATGTGTTTTGCGCTTGGTTTGTATTT CAAGGAGGTTGTGGCACACAGGTGTAGAGCTCCTGTAGTCGCATATTTAT ATCAAACGTCGCAGGTTGATCCGCACACAGGTGTCTGTGGCCTCGGTCCT GTGTGTTTTCTGATTAGGCCCGTGATGCGGGCTAATCTGCCATGACAGAG ACTAAACAGAAAGAGAGGCCGTTTCAAGAGAGAAAAACAATGGCTCCCCT CCGAGGAGGGCAGCGATACTTTCAGATCTCGAGTAGAGAAAAGAACACTG ATC
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Coding sequence (CDS) from alignment at P-littoralis_Contig12:182882..186434+

>mRNA_P-littoralis_Contig12.37.2 ID=mRNA_P-littoralis_Contig12.37.2|Name=mRNA_P-littoralis_Contig12.37.2|organism=Pylaiella littoralis U1_48|type=CDS|length=789bp|location=Sequence derived from alignment at P-littoralis_Contig12:182882..186434+ (Pylaiella littoralis U1_48)
ATGGCGACCGATGAAGCCAAAGTCGTGGATGCGGTGCCTCCACCCCCTGC
ATATTACAAGCTCTTCTCTCCAGACGCTGCATTAGGTGTGCATCAGCCGG
CAACGGGCGCAGCAGCAGGAGCAGCAGCAGGAGCAGGATCGCCAAATGTC
TTTCCTCTGGAACCACCTCGGCCACCAGGCCCGGGCGAGACATATACAAT
GTTTGGGATGCCTTACAGCTCGGAGCCGGTCACCGAGGAACTGCTTCCAC
CAGAGAAGATGGTGGTGCCGCCTACCGGCGAGGCGATCGATTTCCGGGCT
GAGCTTAAACGCCTACTCAACAGCATCATGGCCAACTACGGGCAGTTCAT
GGAGATGCTCGTCAGCTCACCGTCTCGAGCCCACGAAAAACTGTCGGACG
TGGAAACCCTGTTCGTAAACTTCCACAGCTTGCTCAATCGGTACCGGGCG
CATCAGGCACGACATCTCATCCTCGAGCGCTTACGCGGACAGGCAGAGCA
AAACGATGCCGTGACTTCCGCCCTCGAAGCTGCCATGCTCCAGTGCGCCT
CTGCCAGACAAGGAGCGGCCGCCTGCCTCGGCCTTGTACCTAGCGGCGCA
AGCGACACCAAAGAAGATAGTGGGGGAGTTCCAATGGACGTGGTGGATGA
TCTAGGGGGAGGAGGGGGCATCGGGGTAGACGGGGCCAGTGGGATGAGTG
GTGTTGGCGTCGGGAAAGGCAATGGGTTGGGGGGGAAGGGGAAGTTGCGC
GCGGTTGAGCCGGCGGGTGTGGACGAGAGCGGTAGATGA
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