mRNA_P-littoralis_Contig80.16.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 178 bits (452), Expect = 6.790e-44 Identity = 168/430 (39.07%), Postives = 213/430 (49.53%), Query Frame = 1
Query: 154 LAEAVRHGSTQMLHALFSDAIGSIDLNAAVHTAKDWTLLMLAASHGHSEIASILLDNGASTSITCENGFSALYIA-ARGGHLAVTETLIEAGADLEARPPCEFPDVALTPXXXXXXXXXXXXXXXXXXXXXXPNTRCLDGITMLSRAAGXXXXXXXXXXXXXXXNPLLTGGMP--GLAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRLDVADFNGRTPLLNSISSACYSSS-RIVRLLVDSGVDTLSTLRFKDAADRVIVA-TPLAVTTRLIEVKQIR-GKEATKKXXXXXXXXXXXXXXXXXCRSVCWSWRSDVNSIARAITEDRHTAKMVLISPTSMFPILRPRARRRGVLVAALSRYSGK 1425
L AV GS ++ A+ + ID + T LM+A +GHS IA +L+ GA+ SI + GF+AL+ AR A+ + L +AGADL+A P E P XXXXXXXXXXXXX P+ + DG T L AA NPLL P VPLD+AA G VVREL+Q++G+EGC S G AL AA H++IM L EAGVVDTG AL AA G EA VK LL+ R K + L+ D NG TPL+ + C+S + RIVR+LVD+G DT S ++ + V+ TPLA T + K + GK ATK+ +V W W S I RA D L M PIL+ R +RR LVA L RYS K
Sbjct: 109 LHRAVLVGSAELTQAVLAGGTVEIDQRNSYGA----TPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGE----GSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLV-VCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPAL---KLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 146 bits (369), Expect = 6.220e-34 Identity = 155/435 (35.63%), Postives = 204/435 (46.90%), Query Frame = 1
Query: 154 LAEAVRHGSTQMLHALFSDAIGSIDLNAAVHTAKDWTLLMLAASHGHSEIASILLDNGASTSITCENGFSALYIAARGGHLAVTETLIEAGADLEARPPCEFPDVALTPXXXXXXXXXXXXXXXXXXXXXXPNTRCLDGITMLSRAAGXXXXXXXXXXXXXXXNPLLTGGMPGLAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRLDVADFNGRTPLLNSISSACY----SSSRIVRLLVDSGVDTLSTLRFKDAADRVIVA-TPLAVTTRLIEVKQIRGKEATKKXXXXXXXXXXXXXXXXXCRSVCWSWRSDVNSIARA------ITEDRHTAKMVLISPTSMFPILRPRARRRGVLVAALSRYSGK 1425
L +A GST+ L A GS D+N T +WT L+ AAS GHS + ILL GA+ SI + G +AL++ XXXXXXXXXXXXXXXX P +DG T L RA NPL+T P +PLD AA G + V+REL+Q+VG+EGCGG S G+ AL +A G + M L AGVVDTG AL +A G EA VK LLQ K G + ++V D NG TPLL+SI S R+ RLLV++G DT + LR ++ V+ + TPL +T +++ K++ G +K+ + W W S R +T + A L + PILR RARR GV+ AL R+ K
Sbjct: 4 LHDAAFKGSTERTAELL--ATGSWDINQG--TVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTP----VDGETPLFRAMTEGQLEATRELLRANANPLITRA-PLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAK---HYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKL---GRVLPILRRRARRPGVVWTALCRHQRK 423
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 139 bits (349), Expect = 3.480e-31 Identity = 174/456 (38.16%), Postives = 227/456 (49.78%), Query Frame = 1
Query: 97 SLAPKMHQVSSQQAYLNHLLAEAVRHGSTQMLHALFSDAIGSIDLNAAVHTAKDWTLLMLAASHGHSEIASILLDNGASTSITCENGFSALYIAARGGHLAVTETLIEAGADLEARPPCEFPDVALTPXXXXXXXXXXXXXXXXXXXXXXPNTRCLDGITMLSRAAGXXXXXXXXXXXXXXXNPLLTGGMPGLAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRLDVA---DFNGRTPLLNSISSACYSSS--RIVRLLVDSGVDTLSTLRFKDAADRV-IVATPLAVTTRLIEVKQIRGKEATKKXXXXXXXXXXXXXXXXXCRSVCWSWRSDVNSI-------ARAITEDRHTAKMVLISPTSMFPILRPRARRRGVLVAALSRYSGK 1425
SL P + Q S + +N L EA R GST + A+ S GSID++ + T LM A + H + SILL GAS S + G +AL+++A G++ XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX NPLLT +PLD AA G++GVV ELLQ+ G+ GCGG +GG AL LAA HM++M+ L AGVVDTG+AL +A + G VVK LLQQ+ N T V+ D GRTPL+ +I S ++VRLLVD+G DT S +RF + +V TPL++ T + +K K + + W W++ V + A TE T L ++ PILR RAR RG + A+L RY+ K
Sbjct: 2 SLPPLLQQ--SPRVVINKL-HEAARDGSTWLTAAILST--GSIDIDGG--DSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQ----NGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQL---RTVLPILRRRARGRGFVSASLCRYAVK 438
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 138 bits (347), Expect = 3.930e-31 Identity = 143/358 (39.94%), Postives = 178/358 (49.72%), Query Frame = 1
Query: 154 LAEAVRHGSTQMLHALFSDAIGSIDLNAAVHTAKDWTLLMLAASHGHSEIASILLDNGASTSITCENGFSALYIAAR-GGHLAVTETLIEAGADLEARPPCEFPDVALTPXXXXXXXXXXXXXXXXXXXXXXPNTRCLDGITMLSRAAGXXXXXXXXXXXXXXXNPLLTGGMP-GLAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRL-----DVADFNGRTPLLNSISSACYS---SSRIVRLLVDSGVDTLSTLRFKDAADRV-IVATPLAVTTRLIEVKQIRGKEATKK 1194
L A GS + + AL + SI ++A WT LMLAA G S + ILL+ GA+ S+ E+G +AL+ + + GGH VT L XXXXXXX XXXXXXXXXXX NPLLT P G+ FVPLD AA GQ VVREL++QV ++GCGGASGG AL LAA ++++M L +AGV+DTG AL AA EA VKLLLQQR + T L D D GRTPLL SI S R+VRLLVD+G DT+S + K A ++ TP+ T + GK A +K
Sbjct: 19 LHRAANDGSVERVVALLASR-SSIAIDAGAEYG--WTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLA-----ANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQR----HGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEK 364
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 137 bits (346), Expect = 7.420e-31 Identity = 113/301 (37.54%), Postives = 154/301 (51.16%), Query Frame = 1
Query: 550 NTRCLDGITMLSRAAGXXXXXXXXXXXXXXXNPLLTGGMP---GLAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRLDVADFNGRTPLLNSISSACYSSSRIVRLLVDSGVDTLSTLRFKD--AADRVIVATPLAVTTRLI--EVKQIRGKEATKKXXXXXXXXXXXXXXXXXCRSVCWSWRSDVNSIARAITEDRHTAKMVLISPTSMFPIL--RPRARRRGVLVAALSRYSGK 1425
N+R DG T L AA +PLLT +P G F+PLD AA G VV EL++QVG++GCGG+SGG AL AA+ ++ IMV L AGVVDTG+AL AA G E +K LL+Q + + + ++ D G TPLL I + R+VRLLV++G DT S + ++ D V + TPL +T + +VK + A+ + +V W W SD+++I RA R T + IS P+L R RAR R V +AAL RYS K
Sbjct: 142 NSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTT-VPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQA-RARKTMDEAAYVNTRDRGGVTPLLWGIQ---HYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSI-TPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA--RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 140 bits (352), Expect = 1.930e-30 Identity = 102/263 (38.78%), Postives = 143/263 (54.37%), Query Frame = 1
Query: 670 GLAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRLDVADF------NGRTPLLNSISSACYSSS-RIVRLLVDSGVDTLSTLRFKDAAD-RVIVATPLAVTTRLIEVKQIRGKEATKKXXXXXXXXXXXXXXXXXCRSVCWSWRSD-VNSIARAITEDRHTAKMVLISPTSMFPIL--RPRARRRGVLVAALSRYSGK 1425
G +PLD A VVR+L+QQ+G++GCGGAS G A A + +I+V L + G +DTG L +AA GSEA+VK+LLQQ+ R +D + +GRTP++ I A S S R++RL +D+G DT ST+R + ++ TPLA TT L+ +Q RG ++TK R+V W W+SD ++SI RA+ + R AK L T + L R +AR R VLV A+SRYS K
Sbjct: 344 GRIILPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQ--------RGKHMDWDTYVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQLFRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLPRRRKARARRVLVMAMSRYSRK 598
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: D7FYA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA6_ECTSI) HSP 1 Score: 130 bits (326), Expect = 1.740e-27 Identity = 95/243 (39.09%), Postives = 131/243 (53.91%), Query Frame = 1
Query: 721 VVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRLDVADF------NGRTPLLNSISSACYSSS-RIVRLLVDSGVDTLSTLRFKDAAD-RVIVATPLAVTTRLIEVKQIRGKEATKKXXXXXXXXXXXXXXXXXCRSVCWSWRSDVNS-IARAITEDRHTAKMVLISPTSM---FPILRPRARRRGVLVAALSR 1413
VVR+L+QQ+G++GCGGAS G AL A R +I+V L +AGV+DTG L +A GSEA VK+LLQQ+ R +D + +GRTP++ SI A S S R++RL +D+G DT ST+R + V TPLA TT L+ +Q + ++TK R+V W W+SD +S I RA+ + AK L + + P R RAR VLV A+SR
Sbjct: 333 VVRKLIQQLGIQGCGGASAGADALRRAVRTQQYDIVVMLADAGVIDTGRVLIDATKFGSEASVKILLQQQ--------RWKHMDWNTYVNKKHPDGRTPVVCSIGRALLSGSPRVLRLFLDAGADTASTVRIANKEGVEVFSGTPLAYTTWLLRDQQAQAIDSTKGQPCGLKAVCRMLLQLEAIRAVSWCWQSDASSPIERAVMDGTPRAKSKLTTDPPLGLTLPRTRRRARAHRVLVMAISR 567
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 127 bits (318), Expect = 3.970e-27 Identity = 110/297 (37.04%), Postives = 143/297 (48.15%), Query Frame = 1
Query: 550 NTRCLDGITMLSRAAGXXXXXXXXXXXXXXXNPLLTGGMPG--LAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRLDVADFNGRTPLLNSISSACYSSSRIVRLLVDSGVDTLS-TLRFKDAADRVIVATPLAVTTRLIEVKQIRGKEATKKXXXXXXXXXXXXXXXXXCRSVCWSWRSDVNSIARAITED--RHTAKMVLISPTSMFPILRPRARRRGVLVAALSRYSGK 1425
NTR DG T L AA +PLLT F+PLDVAA G VV EL++QVG++GCGG+SGG+ AL AA ++IM L +AGVVDTG+AL AA G EA +K LL+Q ST R + ++ + G T LL+ I R+V+LLV++G DT S L + TPL +T L+ + K T + +V W W SD +I A + R TA +P M I R R R R L+AAL RYS K
Sbjct: 142 NTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARG-RKSTDRAAYMNTLNGVGLTSLLDGIQRC---RPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRS--AKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGR-RTRGRKGLLAALLRYSSK 431
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: D8LPL4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL4_ECTSI) HSP 1 Score: 125 bits (314), Expect = 7.460e-27 Identity = 156/386 (40.41%), Postives = 206/386 (53.37%), Query Frame = 1
Query: 154 LAEAVRHGSTQMLHALFSDAIGSIDLNAAVHTAKDWTLLMLAASHGHSEIASILLDNGASTSITCENGFSALYIAARGGHLAVTETLIEAGADLEARPPCEFPDVALTPXXXXXXXXXXXXXXXXXXXXXXPNTRCLDGITMLSRAAGXXXXXXXXXXXXXXXNPLLTGGMPGLAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDT-GVALKEAANNGSEAVVKLLLQQREKILNSTGRCSRLDVADFNGRTPLLNSI--SSACYSSSRIVRLLVDSGVDTLSTL-RFKDAADRVIVATPLAVTTRLIEVKQIRGKEATKKXXXXXXXXXXXXXXXXXCRSVCWSWRSDVNSIARA 1299
L A GS + + + S GS+ +N + + WT LMLAA G+S I S LL GA I + G +AL+++AR GH+ V+ LI AGAD+ C F XXXXXXXXXXXXXXXXXXXXXX + R DG XXXXXXXXXXXXXXX + M G +VPLDVA K +V +VREL+ VG+EGCGG+ GG AL LAA+ H++I+ L E GVVD+ G+AL A +G E VKLLLQ+ + + G G+ PLL+ + S SS R++R L+D+G T T R + + T L + T L+ K G T++ +V W W + + A A
Sbjct: 16 LHSAANDGSFEQVFGIVSS--GSVQINQG--SPEGWTPLMLAADGGYSRIVSFLLHKGAIAGIMGDEGVTALHVSARNGHVVVSLMLIRAGADVGLS--C-FTSGGXXXXXXXXXXXXXXXXXXXXXXXXXVDRRLEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXIAT-MEG--YVPLDVATEKFRVDIVRELVDDVGIEGCGGSDGGMVALRLAAQNGHLDILHILHERGVVDSSGLALCAALMHGGEKTVKLLLQRAAEYFSCGGSSYANSAVGSIGK-PLLSCLVRDSLRGSSRRVMRRLIDAGATTDFTFTRINYEGNFMCQTTALDMVTTLLRDKGSGGPSFTQQQMYGLRGMRQLMLQVDAVHAVSWGWATRSAATAAA 390
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI) HSP 1 Score: 119 bits (298), Expect = 5.790e-26 Identity = 116/261 (44.44%), Postives = 144/261 (55.17%), Query Frame = 1
Query: 154 LAEAVRHGSTQMLHALFSDAIGSIDLNAAVHTAKDWTLLMLAASHGHSEIASILLDNGASTSITCENGFSALYIAAR-GGHLAVTETLIEAGADLEARPPCEFPDVALTPXXXXXXXXXXXXXXXXXXXXXXPNTRCLDGITMLSRAAGXXXXXXXXXXXXXXXNPLLTGGMP-GLAFVPLDVAASKGQVGVVRELLQQVGVEGCGGASGGKAALHLAARGLHMEIMVNLMEAGVVDTGVALKEAANNGSEAVVKLLLQQR 930
L A GS + + AL + SID+N WT LMLAA G S + IL + GA+ S+ ++ +AL+ + + GGH VT+ L++AGAD EA TP XXXXXXXXX XXXXXXXXXXX NPLLT G+ FVPLD AA GQ VV+EL+QQV ++GCGGASGG AL LAA ++++M L + GV+DTG AL AA EA VKLLLQQR
Sbjct: 19 LHRAANDGSIERVVALLASR-PSIDINQGAEYG--WTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEA-----VTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTSSGVTFVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAAGRNDEAGVKLLLQQR 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig80.16.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig80.16.2 >prot_P-littoralis_Contig80.16.2 ID=prot_P-littoralis_Contig80.16.2|Name=mRNA_P-littoralis_Contig80.16.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=440bp MHQVSSQQAYLNHLLAEAVRHGSTQMLHALFSDAIGSIDLNAAVHTAKDWback to top mRNA from alignment at P-littoralis_Contig80:123810..138349- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig80.16.2 ID=mRNA_P-littoralis_Contig80.16.2|Name=mRNA_P-littoralis_Contig80.16.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=14540bp|location=Sequence derived from alignment at P-littoralis_Contig80:123810..138349- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig80:123810..138349- >mRNA_P-littoralis_Contig80.16.2 ID=mRNA_P-littoralis_Contig80.16.2|Name=mRNA_P-littoralis_Contig80.16.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1320bp|location=Sequence derived from alignment at P-littoralis_Contig80:123810..138349- (Pylaiella littoralis U1_48)back to top |