prot_P-littoralis_Contig80.14.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig80.14.2
Unique Name	prot_P-littoralis_Contig80.14.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	505

Homology

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BLAST of mRNA_P-littoralis_Contig80.14.2 vs. uniprot
Match: A0A6H5J884_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J884_9PHAE)

HSP 1 Score: 542 bits (1397), Expect = 4.220e-189
Identity = 289/404 (71.53%), Postives = 329/404 (81.44%), Query Frame = 0

Query:    1 MSAGRLYHAVASQGLAVLTCALAASAMQQTNPTTLRCSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQPINPCAEYNTLKWRMSYASRKHDCNAEDSCVFIGRSITGACAPRDPSILHKRRSLPNVPLVLPDSDGSTKRRKAALQRQHTAKVIGETIDELESEFEEEGEENF-DSKLAANKFVELMSALDVEESTQELALAILKEEGMQAVQVFVKSQLANAAAEELRFQKSATKAFAKDFLIKVMRDPELPGQMGHMLESMFKAPALSTGIRHLIYNAVGMDHTYRSSLTLTIPLIRWLLSETDWMEEEALKLCTYLIRLEQTELATVWLVAWAIREPGILDPAASRGLAASLPFGSEHITAAMVWALTNTLESDWALEMAKSVTVEMIKS 403
            M+  RL   +AS   A+ +C + ASA+Q ++ T+L CSNS                                       +P+NPCAE+NTLKWRMSYA RK+DCN EDSCVF+GRS+TGAC PRDPSILHKRRS PNVPLVLPDSDGSTK+ +AALQRQHTAKV+ ETIDELESEFE +G E + D+KLAANKF ELMSALDVEESTQELALAIL+EEGM AVQVFVKSQLANAAAEELR+QKSAT+AFAKDFL++V+R+PELPGQMGHMLES+FK PALSTGIRHLIYNAVG+D+TY+SSLTLTIPLIRWLLSETDWM+ EA KLC YL+RLEQTELAT+ LVAWAIREPGILDP++SRGLAASLP GS+ IT +MVWALT TL+SDWALEMAKS TVEMIKS
Sbjct:    1 MAGSRLCCTLASNASALASCTVVASAVQ-SSLTSLSCSNSEDGGSRRRGNNRRVRERSEEEA-----------------EPVNPCAEFNTLKWRMSYAHRKNDCNGEDSCVFVGRSVTGACVPRDPSILHKRRSFPNVPLVLPDSDGSTKKLQAALQRQHTAKVMSETIDELESEFEHKGVEPYSDTKLAANKFRELMSALDVEESTQELALAILQEEGMHAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEVIREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPLIRWLLSETDWMDAEAAKLCAYLVRLEQTELATILLVAWAIREPGILDPSSSRGLAASLPLGSQQITDSMVWALTETLKSDWALEMAKSTTVEMIKS 386

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig80.14.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig80.14.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5J884_9PHAE	4.220e-189	71.53	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..494
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..54

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig80	contig	P-littoralis_Contig80:111131..123091 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig80.14.2	mRNA_P-littoralis_Contig80.14.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig80 111050..123765 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig80.14.2 ID=prot_P-littoralis_Contig80.14.2|Name=mRNA_P-littoralis_Contig80.14.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=505bp
MSAGRLYHAVASQGLAVLTCALAASAMQQTNPTTLRCSNSSNSSNSSSNS
SNKEHSAAARRKRERSPQEEEEAEEEQRQQPINPCAEYNTLKWRMSYASR
KHDCNAEDSCVFIGRSITGACAPRDPSILHKRRSLPNVPLVLPDSDGSTK
RRKAALQRQHTAKVIGETIDELESEFEEEGEENFDSKLAANKFVELMSAL
DVEESTQELALAILKEEGMQAVQVFVKSQLANAAAEELRFQKSATKAFAK
DFLIKVMRDPELPGQMGHMLESMFKAPALSTGIRHLIYNAVGMDHTYRSS
LTLTIPLIRWLLSETDWMEEEALKLCTYLIRLEQTELATVWLVAWAIREP
GILDPAASRGLAASLPFGSEHITAAMVWALTNTLESDWALEMAKSVTVEM
IKSSETASGKGTKRPLSSSSSPTVEAISVDTGNDEALGDSDDAPSSSRSS
AADSRLGGVVDQKEDVGVNGEVRIVDTKASEGVEGREDAIASAGAEENRR
GIGP*