prot_P-littoralis_Contig80.10.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig80.10.2
Unique Nameprot_P-littoralis_Contig80.10.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length233
Homology
BLAST of mRNA_P-littoralis_Contig80.10.2 vs. uniprot
Match: D7FGQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGQ0_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 8.910e-81
Identity = 158/239 (66.11%), Postives = 177/239 (74.06%), Query Frame = 0
Query:    1 MPKRSSSAAAVCTTAAVVLTAVPTSAFLVPVPMTTAPSGVARQATRTLG-----TSPFQARYGPKRQDVAGDGRAPVTTRALTDAGRRA-RRSHVTRTSMVFGXXXXXXXXX-GFRLDPGTIATIGFGLLFVFAPGVIFGAFNTLFLVVTVGPILFSVGFNLYNKFNVVDAPCPVCGVGLQGLKNKQNQCPSCGAMIVAQNGKFEAVGSGYVRDEAGTQQEFSRVGDSGVIDVDAIDVD 232
            MPKR S A   CTTA   L ++ +S   VP     +P      +   +G      S FQ    P    V  + RAP     L+ AGRR+ RRS  T  +MVFGXXXXXXXXX GFRLDPGTIATIGFGLLFVFAPGVIFGAFNTLFL +TVGPILFS G NLYN+ N+VDAPCPVCGV LQGLKNKQNQCPSCGAM++A++GKFEAVGSGYVRDEAGTQ+EFSR+GDSGVIDVDAIDVD
Sbjct:    1 MPKRRSFAMVACTTAVAALMSMQSSTAFVPTTTLASPPAALHSSRIPVGRSRGHVSQFQPGSDPIGYKVGLERRAPALP--LSRAGRRSSRRSQAT--AMVFGXXXXXXXXXXGFRLDPGTIATIGFGLLFVFAPGVIFGAFNTLFLTITVGPILFSAGLNLYNRINLVDAPCPVCGVDLQGLKNKQNQCPSCGAMLLAKDGKFEAVGSGYVRDEAGTQREFSRMGDSGVIDVDAIDVD 235          
BLAST of mRNA_P-littoralis_Contig80.10.2 vs. uniprot
Match: Q8DIB6_THEVB (Tlr1674 protein n=5 Tax=Cyanobacteria TaxID=1117 RepID=Q8DIB6_THEVB)

HSP 1 Score: 63.9 bits (154), Expect = 1.550e-9
Identity = 34/98 (34.69%), Postives = 52/98 (53.06%), Query Frame = 0
Query:  134 AFNTLFLVVTVGPILFSVGFNLYNKFNVVDAPCPVCGVGLQGLKNKQNQCPSCGAMIVAQNGKFEAVGSGYVRDEAGTQQEFSRVGDSGVIDVDAIDV 231
            +F  LFL++ + P+L   G  L+ ++ +V A CPVCG     L N Q QCP+CG M++             VRD     ++F R+   G IDV A+++
Sbjct:   35 SFLVLFLILMLTPVLLFAGLQLWLRWQLVTAACPVCGFEFSSLNNTQTQCPACGEMLM-------------VRD-----RQFQRLAPPGTIDVQAVEI 114          
BLAST of mRNA_P-littoralis_Contig80.10.2 vs. uniprot
Match: A0A3B7MCW6_9CYAN (Uncharacterized protein n=3 Tax=Thermosynechococcus TaxID=146785 RepID=A0A3B7MCW6_9CYAN)

HSP 1 Score: 61.6 bits (148), Expect = 1.120e-8
Identity = 33/98 (33.67%), Postives = 51/98 (52.04%), Query Frame = 0
Query:  134 AFNTLFLVVTVGPILFSVGFNLYNKFNVVDAPCPVCGVGLQGLKNKQNQCPSCGAMIVAQNGKFEAVGSGYVRDEAGTQQEFSRVGDSGVIDVDAIDV 231
            +F  LF ++ + P+L   G  L+ ++ +V A CPVCG     L N Q QCP+CG +++             VRD     ++F R+   G IDV A++V
Sbjct:   35 SFLVLFFILMLTPVLLFAGLQLWFRWKLVTAACPVCGFEFSSLNNTQTQCPACGELLM-------------VRD-----RQFQRLAPPGTIDVQAVEV 114          
BLAST of mRNA_P-littoralis_Contig80.10.2 vs. uniprot
Match: A0A2D2PZR7_THELV (Uncharacterized protein n=1 Tax=Synechococcus lividus PCC 6715 TaxID=1917166 RepID=A0A2D2PZR7_THELV)

HSP 1 Score: 58.5 bits (140), Expect = 1.570e-7
Identity = 34/94 (36.17%), Postives = 49/94 (52.13%), Query Frame = 0
Query:  138 LFLVVTVGPILFSVGFNLYNKFNVVDAPCPVCGVGLQGLKNKQNQCPSCGAMIVAQNGKFEAVGSGYVRDEAGTQQEFSRVGDSGVIDVDAIDV 231
            L L++ V P+L  VG  L+ ++ +V A CPVC      L N Q QCP+CG ++V             VRD     ++F R+   G IDV A++V
Sbjct:   40 LLLILMVTPVLLVVGLQLWLRWTLVTAACPVCRFEFSSLNNTQTQCPACGEVLV-------------VRD-----RQFQRLTPPGTIDVTAVEV 115          
BLAST of mRNA_P-littoralis_Contig80.10.2 vs. uniprot
Match: B7GCU8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GCU8_PHATC)

HSP 1 Score: 55.8 bits (133), Expect = 1.100e-5
Identity = 30/86 (34.88%), Postives = 50/86 (58.14%), Query Frame = 0
Query:  114 TIATIGFGLLFVFAP--GVIFGAFNTLFLVVTVGPILFSVGFNLYNKFNVVDAPCPVCGVGLQGLKN-----KQNQCPSCGAMIVA 192
            ++ T+G  + F  +P   + F  FN+L L+  + P+L  VGFNL+  +N ++APCP CG   + LKN       + C +CG+++ A
Sbjct:  101 SVLTVGGVVAFFASPLGAIFFAVFNSLVLLAILLPVLGIVGFNLWQYWNTMEAPCPNCGAPARVLKNTGVAPNPSLCLNCGSLVAA 186          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig80.10.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FGQ0_ECTSI8.910e-8166.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
Q8DIB6_THEVB1.550e-934.69Tlr1674 protein n=5 Tax=Cyanobacteria TaxID=1117 R... [more]
A0A3B7MCW6_9CYAN1.120e-833.67Uncharacterized protein n=3 Tax=Thermosynechococcu... [more]
A0A2D2PZR7_THELV1.570e-736.17Uncharacterized protein n=1 Tax=Synechococcus livi... [more]
B7GCU8_PHATC1.100e-534.88Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig80contigP-littoralis_Contig80:99651..110852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig80.10.2mRNA_P-littoralis_Contig80.10.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig80 98310..110959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig80.10.2 ID=prot_P-littoralis_Contig80.10.2|Name=mRNA_P-littoralis_Contig80.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp
MPKRSSSAAAVCTTAAVVLTAVPTSAFLVPVPMTTAPSGVARQATRTLGT
SPFQARYGPKRQDVAGDGRAPVTTRALTDAGRRARRSHVTRTSMVFGGGG
GRGGGGGFRLDPGTIATIGFGLLFVFAPGVIFGAFNTLFLVVTVGPILFS
VGFNLYNKFNVVDAPCPVCGVGLQGLKNKQNQCPSCGAMIVAQNGKFEAV
GSGYVRDEAGTQQEFSRVGDSGVIDVDAIDVD*
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