mRNA_P-littoralis_Contig12.35.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A6H5JUF7_9PHAE (GCFC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF7_9PHAE) HSP 1 Score: 1178 bits (3048), Expect = 0.000e+0 Identity = 753/1022 (73.68%), Postives = 803/1022 (78.57%), Query Frame = 2
Query: 137 MFKARKKDIRRRPAIKSKTAAEASSDEDEGGNVSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKGPKHVLSFGHEDEEDSGIGVGKAA-GKGAD-VFRVKKSKASKAMAKAAKEKTELPVAPQNDSARGSWHTATAGMYTKEGLAELRSSQAFTPKPSGGRSRERMTRGGVSGGSGEEGAAVGAAPTEQVFAGDEAEMVHEAGQQGDLKDDFNNDDISRLKGRHEALVASREAQGKG---QRGGEDFIPLDGKMPVPGARTGLAHAGAANGNGXXXXXXXXXXXXXXXXXVRRGATRPAAKPKRPLPSTSPWGGGTTVATVNXXXXTTGAGWGGTAGERPRFLGIKEMQKALREAATQLRETHERNERQLQVLVSEVATQKAEEEKLSSQQKEAAERFGFFQQTRNALSDLCGMLREKESMISEVEAAKRLLHARRLERAIDVRLQDQEDEILDARDAGAAVAGLGPYRACPGGPLSKSTRVVGGNPGVGNGAGADSSERXXXXXXXXXXXXXXLVGGGEGARRGGEGEGWVGSKSFPWSKKERLEVWQALGSDGEESEGEEEREEGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPLTGKVDGVDGVG---GRSNTGSKNSSAAATESKS-----------------QPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGSAYEALQTAVRNVCIPVIGPCANPGGRAAAVRLVRIQAARGLKLLRNCLAWRDLLSPESLLPLALGDLVAKRLVPAFRGLAPRGKAAAVAEG--GAARNKGAXXXXXXXXXXXEALALCERAVELLPLDWMERPEASAPLASVRITARLFGDGL-EVAVGXXXXXXXXXXXXXXXXXIAAVERVVRLQVALGDEVAAKDLAQRYGLKIA 3118
MFK RKKD RRR A KSKTA + +S EDE GNVSDA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VLSFGH AA GKGAD FRVKKSKASKAMAKAAKEKTELPVAPQN+SARGSWHTATAGMYTKEGLAELRSSQAFTPKPSGGRSRERMTRGG S GEE A+ AA E+VFAGDEAEM+HEAGQQGDLK+D N +DISRLKGRHEAL+ASREA GKG GEDFIPLD K PVPGAR GL H NG+G XXXXXX VRRGATRPAAKPK +PSTSPWGGG+TVATVN T G+GWG T GERPRFLGI EMQKALREA TQLRETHERNERQLQVLVSE+ATQ AEE+KLSSQ+KEAAERFGFFQQTRNALSDLCGMLREKESM+SEVEAAKRLLHARRLER + VRLQDQEDEILDARDAGA V+GLGPYRACPGGPLS++ R+ G + +G+ A +R XXXXXXXXXXX G G G R EGEGWVGSKSFPW KKER EVWQALGS+GEESE REE R RV EA ++VMEDVDDSVKSVSAVK LFE+WKR+HGEQYAQAYCTLT+PDLLAPFVRLELVRW+PLTGKV GVDGVG R N + +A E+ S QP+ AAGGDETDEGEDDLEG LERFEWYRRLFDFS DIPPP+SAGYG DEDPDQNLVPQLVEKVALPLVAERL TAYDAMSRRQTACLVSAVSEIL+YDP EESLKTLLGSA ALQ AV+ VCIP+IG + PGGRAAAVRLVRIQA+RGLKLLRNCLAWRDLLSPESL+PLALGDLVAKRLVPA R L RG A+ A G +A +KGA EALALCERAVELLPLDWMER ASAPLASVRITARLFGDGL VG +AAVERVVRLQVALGD+ AAKDLAQR+GLKIA
Sbjct: 1 MFKTRKKDPRRRLASKSKTAEDGAS-EDEAGNVSDASVGTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-----------VLSFGHXXXXXXXXXXXXAAAGKGADGFFRVKKSKASKAMAKAAKEKTELPVAPQNNSARGSWHTATAGMYTKEGLAELRSSQAFTPKPSGGRSRERMTRGGNSSNGGEETAS--AAANERVFAGDEAEMIHEAGQQGDLKEDLNKNDISRLKGRHEALLASREAMGKGAPDSGDGEDFIPLDAKAPVPGARKGLTHD-VVNGDGGREDXXXXXXWEEEQ--VRRGATRPAAKPKPSIPSTSPWGGGSTVATVNVGGGTAGSGWGETPGERPRFLGIDEMQKALREAGTQLRETHERNERQLQVLVSELATQVAEEQKLSSQEKEAAERFGFFQQTRNALSDLCGMLREKESMLSEVEAAKRLLHARRLERVVQVRLQDQEDEILDARDAGATVSGLGPYRACPGGPLSRAPRIGGAS--MGSSANGGEDDRSXXXXXXXXXXXRCSTGEGPGGVR--EGEGWVGSKSFPWGKKERTEVWQALGSEGEESEXXXXREEERLTRVQEAADMVMEDVDDSVKSVSAVKALFENWKRQHGEQYAQAYCTLTIPDLLAPFVRLELVRWNPLTGKVGGVDGVGTRNSRDNRKGQKPAAVGVENDSEGPRNEEQKEEEDMKGLQPS-AAGGDETDEGEDDLEGALERFEWYRRLFDFSEDIPPPDSAGYGADEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILIYDPTEESLKTLLGSAMRALQAAVQGVCIPLIGASSTPGGRAAAVRLVRIQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLVPALRELGARGNASGTAAGISNSAGHKGAAAMGAGWS---EALALCERAVELLPLDWMERTNASAPLASVRITARLFGDGLGSGGVGGGKGRAAA---------VAAVERVVRLQVALGDDTAAKDLAQRFGLKIA 988
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A835YVY7_9STRA (GCFC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY7_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.640e-50 Identity = 234/780 (30.00%), Postives = 312/780 (40.00%), Query Frame = 2
Query: 566 RGSWHTATAGMYTKEGLAELRSSQAFTPKPSGGRS------------------RERMTRGGVSGGSGEEGAAVGAAPTEQVFAGDEAEMVHEAGQQGDLKDD-------FNNDDISRLKGRHEALVASREAQGKGQRGG--EDFIPLDGKMPVPGA------RTGLAHAGAANGNGXXXXXXXXXXXXXXXXXVRRGATRPAAKPKRPLPSTSPWGGGTTVATVNXXXXTTGAGWGGTAGERPRFLGIKEMQKALREAATQLRETHERNERQLQVLVSEVATQKAEEEKLSSQQKEAAERFGFFQQTRNALSDLCGMLREKESMISEVEAAKRLLHARRLERAIDVRLQDQEDEILDAR-DAGAAVAGLGPYRACPGGPLSKSTRVVGGNPGVGNGAGADSSERXXXXXXXXXXXXXXLVGGGEGARRGGEGEGWVGSKSFPWSKKERLEVWQALGSDGEESEGEEERE---------------EGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPLTGKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGSAYEALQTAVRNVCIPVIGPCANPGGRAAAVRLVRIQAARGLKLLRNCLAWRDLLSPESLLPLALGDLVAKRLVPAF----RGLAP 2746
R W +TAG+YTKE LA+LRSSQA P+ + ++ M+ G A + VF G+EA V E G++G D +R + A G R G E+FIP D PVPGA R+ L + G RGA XXXX + + E+++AL AA LR+ ER RQL +E+ A F FQ R L D+CGMLR KE M++++EAA+ + A RA R A AV LG Y P GPL + +G XXXXXXXXXX + WV + ++L SD E S R +L+A LV+EDVD+ V+S+ A+K LFE WKR HGE YA+AYC L+LP LLAP VRLE++RWDP+ G V G D AGAA +++++ V ERF W+R LFDF+ I P +A Y DEDPD +LVP+L+E A+P +A + +AYDA S TA LV+ L +C+PV+GP A GG A AAR L N AW + + +L+P+A+G++ A+R PA RG AP
Sbjct: 273 RRGWKHSTAGLYTKEALAQLRSSQASIVGPAAAAAAADEMDVDDIHTDSYAALQQHMSANGDH-----------AETSGAVFTGEEAAFVQEYGEKGGALDSPTTIARHMQQHSEARTQXXXXXXXXXXXAGKNGTRAGAAENFIPFDVDTPVPGAGAASTLRSVLGRQMELDDGGGARGEDDEAQAKWEMDVATRGAA------------------------XXXXXXXXXXXXXXXXXXXDAAISVAELKRALDTAAAALRQASERGARQLAAADAELXXXXXXXXXXXXXXXAAGRLFETFQSIRARLGDVCGMLRAKEGMVAQLEAARDAIGADAAARAXXXXXXXXXXXXXXVRRSAPGAVESLGDYEPLPDGPLERLR------------SGGXXXXXXXXXXXXXXXPRDATF------------DAWVQDHALR----------ESLASDAESSSXXXXXXXXXXXXXXXXXXXXXRARVAALLDAAALVLEDVDEDVRSLPALKALFEGWKRDHGEHYARAYCALSLPPLLAPLVRLEMLRWDPVHGTVRGGD------------------------AGAAAA-----ADEEVDTVFERFAWFRCLFDFAEGIATPAAAEYATDEDPDADLVPKLLEAAAVPQLAAAIESAYDAGSAAATAHLVAXXXXXXXXXXXXXXXXXXXXXPLPPLXXXXXALCVPVVGPLAARGGGVALAARRLWHAAR---LYHNAAAWDGVAAAAALVPIAIGEVAARRAAPALERLLRGRAP 951
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: W7TSY7_9STRA (Gc-rich sequence dna-binding factor 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSY7_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.580e-47 Identity = 165/534 (30.90%), Postives = 243/534 (45.51%), Query Frame = 2
Query: 1199 FLGIKEMQKALREAATQLRETHERNERQLQVLVSEVATQKAEEEKLSSQQKEAAERFGFFQQTRNALSDLCGMLREKESMISEVEAAKRLLHARRLERAIDVRLQDQEDEILDARDAGA------------AVAGLGPYRACPGGPLSKSTRVVGGNPGVGN---------GAGADSSERXXXXXXXXXXXXXXLVGGGEGARRGGEGEGWVGSKSFPWSKKERLEVWQALGSDGEESEGEEEREEGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPL--TGKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGSAYEALQTAVRNVCIPVIGPCANPGGRAAAVRLVRIQAARGLKLLRNCLAWRDLLSPESLLPLALGDLVAKRLVPAF 2731
F ++ + +R ++L E+H+RN R + SEVA+ K EK+ + A RF +FQ R LS LCG LREKE+M+ E+EAA L ER + R+QDQED + +A + ++ G P L +S G PG + +G S +R + G G ++ E +A S EES+ E E R ++LEA ++ EDV D K++ AV FEDWKR+ + Y AY + LP +L P+VR+E+V W+PL ++ DG GG+ GAA +E F W+ RLF++ G SA EDPD LVPQLVEKVA+ + L YD S R+T +SA+ +L+Y+P + +L++LL + + L+ A+ +C+P++GP A + R Q LKL RN W +L+P L L LG L+ +L A
Sbjct: 93 FKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIA---LKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGG--------------------DKAEA-EATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGK-----------------DVGGAA---------------IEAFPWFERLFEY-GQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAG----ISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASAL 565
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A4D9D9I3_9STRA (GCFC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9I3_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.450e-46 Identity = 166/539 (30.80%), Postives = 243/539 (45.08%), Query Frame = 2
Query: 1199 FLGIKEMQKALREAATQLRETHERNERQLQVLVSEVATQKAEEEKLSSQQKEAAERFGFFQQTRNALSDLCGMLREKESMISEVEAAKRLLHARRLERAIDVRLQDQEDEILDARDAGA------------AVAGLGPYRACPGGPLSKSTRVVGGNPGVGN---------GAGADSSERXXXXXXXXXXXXXXLVGGGEGARRGGEGEGWVGSKSFPWSKKERLEVWQALGSDGEESEGEEEREEGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPL--TGKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFS-----GDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGSAYEALQTAVRNVCIPVIGPCANPGGRAAAVRLVRIQAARGLKLLRNCLAWRDLLSPESLLPLALGDLVAKRLVPAF 2731
F ++ + +R ++L E+H+RN R + SEVA+ K EK+ + A RF +FQ R LS LCG LREKE+M+ E+EAA L ER + R+QDQED + +A + ++ G P L +S G PG + +G S ER + G G ++ E +A S EES+ E E R ++LEA ++ EDV D K++ AV FEDWKR+ + Y AY LP +L P+VR+E+V W+PL ++ DG GG+ GAA +E F W+ RLF++ G +P E EDPD LVPQLVEKVA+ + L YD S R+T +SA+ +L+Y+P + +L++LL + + L+ A+ +C+P++GP A + R Q LKL RN W +L+P L L LG L+ +L A
Sbjct: 255 FKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFDGTAARFEYFQDVRIFLSSLCGCLREKEAMVGELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYDPEVVIA---LKESLSKGTGAPGAAHHDLDEFGRDASGEMSKERRRRERRGRLASVLERINDGTGG--------------------DKAEA-EATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKLPKDYHTAYVPTALPQVLEPYVRVEMVAWNPLGPVRSMEDGDGAGGKDF------------------GAA--------------AIEAFPWFERLFEYGQSQEEGSVPEQEG------EDPDDRLVPQLVEKVAVSRLEGLLSECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAG----ISLWEFQRRQIFVALKLFRNACFWHQVLAPRPLASLVLGVLLDGKLASAL 727
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A7S1UC99_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC99_9STRA) HSP 1 Score: 155 bits (393), Expect = 6.150e-36 Identity = 164/504 (32.54%), Postives = 225/504 (44.64%), Query Frame = 2
Query: 1217 MQKALREAATQLRETHERNERQLQVLVSEVATQKAEEEKLSSQQKEAAERFG------FFQQTRNALSDLCGMLREKESMISEVEAAKRLLHARRLERAID-VRLQDQEDEILDARDAGAAVAGLGPYRACPGGPLSKSTRVVGGNPGVGNGAGADSSERXXXXXXXXXXXXXXLVGGGEGARRGGEGEGWVGSKSFPWSKK-----ERLEVWQALGSDGEESEGE-EEREEGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPLTGKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLER--------FEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGSAYEALQTAVRNVCIPVI----GPCANPGGRAAAVRLVRIQAARGLKLLRNCLAW 2653
++K LRE A L E E ER+ + + SE+ +A+EE AA+RFG + Q+ R L L LR K M+S+VE A R +H R L +D +RL+D ED + + D V L YR PL +S G GNG A + G ARR + +++ + + +A GS EES+ E EE+ + R +VL A L++EDVD AV F WKR EQY QA+ +L LPDLLAP V L+L+RW P G+ + PA G EG ER + W+ LFDF+ ++ E+A +ED D LVP+LVEK ALPL+ YDA SRRQT + A SE L+Y P +++ LLG+ + A+ V +P+ G CA R AA L + Q K+ N LAW
Sbjct: 44 VEKRLREGAAALDEAAEEQERREERIRSELLDFEAKEEAA------AAKRFGRERALEYHQELRAYLITLAACLRTKADMVSQVEEAMRTVH-RNLRAELDKLRLEDAEDSLTELMDE-KIVWDLNGYRPRTA-PLKRSAE------GKGNGRAAPEVDEFGRSRETYQDR-------GRAARRERSERRREALLNRARARRGDTLSDAALLAEASGSGLEESDAETEEKRDARIGKVLAAAALILEDVDAEFGRAGAVAERFAAWKREFPEQYGQAFASLALPDLLAPLVTLQLLRWQPALGE-------------------------EYLPAADGG-----------EGAFERRPFAGLAEYAWHAELFDFAQEL---EAAS---EEDQDAQLVPRLVEKSALPLLRFHAAEVYDAHSRRQTRACIDAASEALLYGPPRAAVEELLGAVAARIAEALDRVALPLCAEEAGDCAPSAARLAAGFLEQ-QLHTAAKVAANALAW 482
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A7S3UVN3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVN3_HETAK) HSP 1 Score: 141 bits (355), Expect = 1.600e-32 Identity = 103/305 (33.77%), Postives = 152/305 (49.84%), Query Frame = 2
Query: 1832 SDGEESEGEEEREEGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPLT-------GKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGSAYEALQTAVRNVCIPVIGPCANPGGRAAAVRLVRIQAARGLKLLRNCLAWRDLLSPESLLPLALGDLVAKRLVP 2725
S E+S+GE R ++LEA +++EDV + + + +K LFE+WKR E+YAQ YC+L+LP LL PFVRLEL+ WDPL G+ +G V G + A + ED E F WYR D++ IP P++A + DPD+NLVP+LV A P A D S L +A+ E+L+Y+P +L L + + + +CIP++ A A+ R Q +KL +NC ++ +SPE+L LA+ +LV K+LVP
Sbjct: 13 SGAEDSDGEVATLARREGKLLEAAAVILEDVGEEHRDLGRLKRLFEEWKRDFPEEYAQVYCSLSLPPLLEPFVRLELLAWDPLAHALMTRRGEGEGEVAVVGXXXXXXXXENGAWAVDRVPV------------ED-----FEVFNWYRVFCDYAAGIPTPKNAP-AEETDPDENLVPKLVAAAAAPRAAAAAREGLDPRSAAHCRGLAAALGELLLYEPPPAALGPLCQAILVHFKEEIDELCIPLLEV-----SNADALEFTREQMYTAIKLYKNCAIFQQYISPEALTSLAVIELVGKKLVP 294
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A7S3UVL0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVL0_HETAK) HSP 1 Score: 135 bits (340), Expect = 2.760e-31 Identity = 100/302 (33.11%), Postives = 149/302 (49.34%), Query Frame = 2
Query: 1832 SDGEESEGEEEREEGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPLT-------GKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGSAYEALQTAVRNVCIPVIGPCANPGGRAAAVRLVRIQAARGLKLLRNCLAWRDLLSPESLLPLALGDLVAKR 2716
S E+S+GE R ++LEA +++EDV + + + +K LFE+WKR E+YAQ YC+L+LP LL PFVRLEL+ WDPL G+ +G V G + A + ED E F WYR D++ IP P++A + DPD+NLVP+LV A P A D S L +A+ E+L+Y+P +L L + + + +CIP++ A A+ R Q +KL +NC ++ +SPE+L LA+ +LV K+
Sbjct: 13 SGAEDSDGEVATLARREGKLLEAAAVILEDVGEEHRDLGRLKRLFEEWKRDFPEEYAQVYCSLSLPPLLEPFVRLELLAWDPLAHALMTRRGEGEGEVAVVGXXXXXXXXENGAWAVDRVPV------------ED-----FEVFNWYRVFCDYAAGIPTPKNAP-AEETDPDENLVPKLVAAAAAPRAAAAAREGLDPRSAAHCRGLAAALGELLLYEPPPAALGPLCQAILVHFKEEIDELCIPLLEV-----SNADALEFTREQMYTAIKLYKNCAIFQQYISPEALTSLAVIELVGKK 291
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A1Y1HYJ4_KLENI (Transcriptional regulators binding to the GC-rich sequences n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYJ4_KLENI) HSP 1 Score: 137 bits (344), Expect = 4.900e-29 Identity = 104/312 (33.33%), Postives = 154/312 (49.36%), Query Frame = 2
Query: 1835 DGEESEGEEERE-----EGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPLTGKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPD-EDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAE-ESLKTLLGSAYEALQTAVRNVCIPVIGPCANPGGRAAAVRLVRIQAAR---GLKLLRNCLAWRDLLSPESLLPLALGDLVAKRLVPAFRGL 2740
DGE S E E E +GR VL A E V D D+ ++++ VK E+WKR++ Y AY +L+ P L AP+V+LEL++WDPL G+ G DGV WY+ LF++ S G PD +D D N+VP L+EKVALP++ + +D S ++T + +AVSE+ +Y P E E ++ LL A+++ + +V ++ P P AAA + V + A +++LRN + WRD+L P L LAL LVA +L+P R L
Sbjct: 533 DGETSSSESEDEVSAFEKGRGELVL-AAEAVFRDADEEFRTLAKVKERLEEWKRKYPAAYRDAYVSLSAPALFAPYVKLELLKWDPLHGEA-GFDGV---------------------------------------------RWYQELFEYGMG----NSNGAEPDPDDADANMVPTLIEKVALPILLHLITYCWDPQSTKRTVQIAAAVSEVQIYVPPESEPVRDLLS----AVRSRIADVVEKLVVPAWTPALLAAAPQAVAVSAEHFGAAVRVLRNIVLWRDILPPGDLETLALDQLVAAKLLPHLRTL 789
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A150GEB4_GONPE (GCFC domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GEB4_GONPE) HSP 1 Score: 135 bits (340), Expect = 1.850e-28 Identity = 107/313 (34.19%), Postives = 147/313 (46.96%), Query Frame = 2
Query: 1877 RARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPLTGKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAEES-LKTLLGSAYEALQTAVRNVCIPVIGP----CANPGGRAAAVRLVRIQAARGLKLLRNCLAWRDLLSPESLLPLALGDLVAKRLVPAFRGLAPRGKAAAVAEGGAARNKGA 2800
R R ++EAG D D+ S++AVK E+WK R + Y AY L+ P L AP+VRLEL+RWDPL G +G GVG +A K + +WY LF++ + G P++DPD +LVPQLV K+ LPL + +D ++ T C+ + SE+LVY PAEE + LL +L+ A V +P P C R V R +AA L+LL A+ LL+ L LALG +V +L+P R A G+ A A G A GA
Sbjct: 660 RFREIVEAGSTAFADADEEYASIAAVKRRLEEWKARFPKDYTSAYMHLSTPALFAPYVRLELLRWDPLYGGGEGTAGVG-----------SAVVPYKG---------------------FDSHDWYGELFEYG--MGSAAGGGPAPEDDPDADLVPQLVRKLVLPLALHWIERCWDVLNVSHTRCVAALASELLVYVPAEEERMVELLAVLRGSLEAAAEAVSLPPWPPAVLACCPLASR---VLFRRFRAA--LRLLHGVSAFEGLLARGLLTALALGRVVGGQLMPYLRAAAAGGEQLAFAVGAAEAVAGA 933
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Match: A0A2I4FWN6_JUGRE (transcriptional repressor ILP1 n=15 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4FWN6_JUGRE) HSP 1 Score: 132 bits (333), Expect = 1.120e-27 Identity = 140/532 (26.32%), Postives = 228/532 (42.86%), Query Frame = 2
Query: 1172 GGTAGERPRFLGIKEM----QKALREAATQLRETHERNERQLQVLVSEVATQKAEEEKLSSQQKEAAERFGFFQQTRNALSDLCGMLREKESMISEVEAAKRLLHARRLERAIDVRLQDQEDEILDARDAGAAVAGLGPYRACPGGPLSKSTRVVGGNPGVGNGAGADSSERXXXXXXXXXXXXXX-LVGGGEGARRGGEGEGWVGSKSFPWSKKERLE--VWQALGSDGEESEGEEEREEGRARRVLEAGELVMEDVDDSVKSVSAVKTLFEDWKRRHGEQYAQAYCTLTLPDLLAPFVRLELVRWDPLTGKVDGVDGVGGRSNTGSKNSSAAATESKSQPAGAAGGDETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLLTAYDAMSRRQTACLVSAVSEILVYDPAE-ESLKTLLGSAYEALQTAVRNVCIPVIGPCANPGGRAAAVRLVRIQAARGLKLLRNCLAWRDLLSPESLLPLALGDLVAKRLVPAFRGLA 2743
GG G+ L I + +KAL+E +L+E+H R L +++ + L A E+F F Q+ R+ +S +C L++K I E+E + LH R ++ R D +DE ++ A A + R S ++ A A E+ L + RR + SK + E + L SD ES+ E + + +L+ + + D + +SAVK FE WKR + Y AY +L++P + +P+VRLEL++WDPL +D D +W+ LFD+ G + E + + D D D NLVP+LVEKVALP++ + +D +S R+T V+A S + Y PA E+L LL + + L AV N+ +P P AA R+ + + ++LLRN W+++L+ L+ LAL +L+ +++P R +A
Sbjct: 362 GGAIGDLDTMLSIPQQAEVAKKALQENLRRLKESHGRTVISLTKTDDDLSASLSNIAALEKSLSAANEKFIFMQKLRHFVSVICDFLQDKAPYIEELEEQMQKLHEERTSTILERRAADNDDEHMEVEAAVNAAMSVFSQRG-------SSAEIIAAATSAALAASAAVREQTNLPVKLDEFGRDINLQKRMDMLRRAERRKARSDSKRISSMEVENSNQRIEGELSSD--ESDSESTAYQHHRKLLLQTADQIFSDAAEEYSRLSAVKERFEKWKRDYSSSYRDAYMSLSVPAIFSPYVRLELLKWDPLHEDIDFFD----------------------------------------------MKWHSLLFDY-GLLN--EKSDFASD-DADSNLVPELVEKVALPILHHEIAHCWDMLSTRETKNAVNATSLVTNYVPASSEALSDLLVAIHTCLADAVANLTVPTWSPLVLKAVPNAA-RVAAYRFGKSVRLLRNICMWKEILALPVLVKLALDELLYGKMLPHVRSIA 833 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.35.2 >prot_P-littoralis_Contig12.35.2 ID=prot_P-littoralis_Contig12.35.2|Name=mRNA_P-littoralis_Contig12.35.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=995bp MFKARKKDIRRRPAIKSKTAAEASSDEDEGGNVSDASVGTAPAPPPPPAAback to top mRNA from alignment at P-littoralis_Contig12:170188..182639- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.35.2 ID=mRNA_P-littoralis_Contig12.35.2|Name=mRNA_P-littoralis_Contig12.35.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=12452bp|location=Sequence derived from alignment at P-littoralis_Contig12:170188..182639- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:170188..182639- >mRNA_P-littoralis_Contig12.35.2 ID=mRNA_P-littoralis_Contig12.35.2|Name=mRNA_P-littoralis_Contig12.35.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2985bp|location=Sequence derived from alignment at P-littoralis_Contig12:170188..182639- (Pylaiella littoralis U1_48)back to top |