mRNA_P-littoralis_Contig8.274.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: D7FKX5_ECTSI (Amidohydro-rel domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX5_ECTSI) HSP 1 Score: 468 bits (1204), Expect = 1.260e-161 Identity = 215/243 (88.48%), Postives = 232/243 (95.47%), Query Frame = 2
Query: 260 MDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQDGENDEAAWEQLLALAKYPQVFVKTSALFRVAKDAYPYQSLQPRFAALIKHFGSKRLLWGSDFPFVSDGQCGYGPAKDVVCGSMSLTDEEVHNITGGTAQALFGSWAD 988
MD+AG+GGALIVQPINYKFDHSYVLDA+SKWPGKFKGMCLANP+LSP DACAELERLHDQGFC VRFNPYLWPEGGEGMKDDTGVAL+ KAGELG+PVGVMCFKGFGRHV+EIEALLLSSPQTKLVVDHFGFFLQDGE DE AW+Q+LAL+KYP VF+KTSALFRVAKD YPY+SL+PRFAALI+HFGS RLLWGSDFPFVSDGQCGYGPAKDVVC +M L +E+VHNITGGTAQALFGSWAD
Sbjct: 1 MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKLVVDHFGFFLQDGEIDETAWKQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCDAMGLKEEDVHNITGGTAQALFGSWAD 243
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A835YUE6_9STRA (Amidohydro-rel domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE6_9STRA) HSP 1 Score: 283 bits (723), Expect = 4.550e-89 Identity = 135/242 (55.79%), Postives = 174/242 (71.90%), Query Frame = 2
Query: 260 MDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANP-SLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQDGENDEAAWEQLLALAKYPQVFVKTSALFRVAKDAYPYQSLQPRFAALIKHFGSKRLLWGSDFPFVSDGQCGYGPAKDVVCGSMSLTDEEVHNITGGTAQALFGSW 982
MD AGV GALIVQPIN+ +DHSYV + +WP +FKGM L P S++ Q AC +L+ L QGFCSVRFNPYLWPEG +GM +D G +Y KAGEL MPVG MCFKG RH +I ALL +PQT+ ++DHFGFF Q+G ++ +W+QLLALA+YPQV+VKTSA FRV+ +AYPY + P+ L+ FG+ RL+WGSD+PFV D Y A+ + G +++ ++ I GGTAQ LFG W
Sbjct: 1 MDAAGVSGALIVQPINHLYDHSYVQHCLQQWPQRFKGMGLLQPESVTVQQACTQLQTLQRQGFCSVRFNPYLWPEG-QGMSNDFGRQVYKKAGELKMPVGFMCFKGLRRHYSDITALLQCAPQTQAIIDHFGFFRQEGVTEDESWQQLLALAQYPQVYVKTSAFFRVSSEAYPYNDMTPKVLELLDKFGADRLMWGSDYPFVKDS-ISYNSARFTLQGK-GISEADLKMIMGGTAQRLFGHW 239
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A7S0JC00_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JC00_9EUKA) HSP 1 Score: 278 bits (710), Expect = 1.020e-85 Identity = 149/292 (51.03%), Postives = 191/292 (65.41%), Query Frame = 2
Query: 140 MIDSHLHVWGDGKGSFPYAEGQEPPERLRASSSPEVLIQEMDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQ---------DGENDEAAWEQLLALAKYPQVFVKTSALFRVAKDAYPYQSLQPRFAALIKHFGSKRLLWGSDFPFVSDGQCG--YGPAKDVVC-GSMSLTDEEVHNIT-GGTAQALFG 976
+ DSHLHVW DG +PYA EPP LR +++ EV + EAGV GAL+VQP N+K+DH+YV DA+ K G KGMCLANP+LSP++A AEL RLH QGF VRFNPYL+ + +GM D G ALY +AGEL MPVGVM F G + I ALL SP T L+VDH GFF Q + ND+ A+E LL+LA++PQV+VK SALFR++ + P++ LQ R L+ FG++RL+WGSDFPFV+ G Y A ++V +M D + + GGTA LFG
Sbjct: 48 IFDSHLHVWSDGNAPYPYAV--EPPAELREAATTEVFLALAKEAGVAGALVVQPANHKYDHAYVADALRKAGGFLKGMCLANPTLSPEEAVAELTRLHAQGFVGVRFNPYLFSQP-DGMDSDVGRALYRRAGELAMPVGVMAFGGLPAQLPAIRALLAHSPSTLLIVDHMGFFRQPASGGLLGANATNDDEAFEGLLSLAQFPQVYVKVSALFRLSAELAPHRDLQARLGRLLDAFGARRLMWGSDFPFVTVGLAAVEYKQAVEIVSFWNMPELDANAYELLMGGTAARLFG 336
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A7S1Z3V0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3V0_TRICV) HSP 1 Score: 277 bits (709), Expect = 1.800e-85 Identity = 157/332 (47.29%), Postives = 212/332 (63.86%), Query Frame = 2
Query: 11 IMLGVTALATGIHGRWRSGGLWVTFIGVITIFQVQAFSVGPRFMIDSHLHVWG---DGKGSFPYAEGQEPPERLRASSSPEVLIQEMDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDD-TGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQDGENDEAAWEQLLALAKYPQVFVKTSALFRVA---KDAYPYQSLQPR-FAALIKHFGSKRLLWGSDFPFVSDGQCGYGPAKDVVCGSMSLTDEEVHNITGGTAQALFGSW 982
++ G+ A ++GR S L + G + A + P+ +IDSHLHVW + S+PYAEGQ+PP L +S L++ MD+AGV GALIVQPIN+K+DHSYV DAV P + KGM L +P+L P+ A + LE L G+ VRFNPYLWPEG + ++ G+A+Y + GEL MPVGVMCFKG H +I L+ SSP T L++DH GF D E +AA+EQLL+LAKYP V VK SALFRVA D YP+ ++ R F L++ FG+ RL++G+DFP+V + + YG A V S + T+ E ++ GGTA+ LFG W
Sbjct: 15 LLTGLLASLYALNGR--SSALTLKMSG--SSAGPPAAATAPK-VIDSHLHVWASSSEAAKSYPYAEGQDPPPSLIDRASTSELLKIMDDAGVDGALIVQPINHKYDHSYVTDAVRAHPDRLKGMLLHDPALPPERAVSRLEELTLDGYVGVRFNPYLWPEGAKMSEEGGCGLAVYKRCGELKMPVGVMCFKGLELHYDDIVRLIESSPDTALILDHLGFTGLD-ERGDAAFEQLLSLAKYPNVVVKVSALFRVAGPGSDPYPHNGVRTRRFVPLLEAFGADRLMFGTDFPYVLEQEGSYGGATGTVS-SWATTESERASLMGGTAERLFGPW 339
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A6T1Z3Z2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T1Z3Z2_9EUGL) HSP 1 Score: 276 bits (707), Expect = 2.150e-85 Identity = 138/253 (54.55%), Postives = 181/253 (71.54%), Query Frame = 2
Query: 140 MIDSHLHVWGDGKGSFPYAEGQEPPERLRASSSPEVLIQEMDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQD---------GENDEAAWEQLLALAKYPQVFVKTSALFRVAKDAYPYQSLQPRFAALIKHFGSKRLLWGSDFPFVSDG 871
+IDSHLH+W DG+ PY +PP L+++ + E LI+ ++ AGV GAL+VQP N+K+DHSYVLDA+SK P +GMCLANP+L +A AELERL +QGF +VRFNP L+P+G + G AL+ KAGEL +PVG+MCF GF IEAL+ SSP T +V+DH+GFF Q G NDE AWE+LLALA+YPQV+VK SALFRV+ + +P++ L+ R L+K FGS RL+WGSD+PFV+ G
Sbjct: 27 IIDSHLHIWSDGQA--PYQWVVDPPPELQSTGTYETLIRSLESAGVSGALVVQPANHKYDHSYVLDAISKCPELLRGMCLANPTLPVPEAVAELERLAEQGFVAVRFNPALFPDG---LDSPVGKALFEKAGELVLPVGIMCFSGFTAQAPAIEALMKSSPDTTVVIDHWGFFRQPATGGLLGDAGVNDEEAWEKLLALAQYPQVYVKVSALFRVSGEPWPHEDLKLRLQQLLKAFGSYRLMWGSDWPFVTIG 274
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A7S3EWI3_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EWI3_9EUKA) HSP 1 Score: 263 bits (672), Expect = 1.210e-80 Identity = 146/294 (49.66%), Postives = 179/294 (60.88%), Query Frame = 2
Query: 140 MIDSHLHVWGDGKGSFPYAEGQEPPERLRASSSPEVLIQEMDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQDGE---------NDEAAWEQLLALAKYPQVFVKTSALFRVAKDAYPYQSLQPRFAALIKHFGSKRLLWGSDFPFVSDGQCGYGPAKDVVCGSMSLTDEE---VHNITGGTAQALFGSWA 985
MIDSHLHVW DG G +P+ PP+ L++ ++ E LI AGV GALIVQP N+K+DHSYV A+ P F+GMCLANP+L A LE LH GF VRFNPYL+P+G M D G ALY KAGELGMPVGVM F GF + I+ALL S +T L++DHFGF+ Q NDE AW LL LA PQV+VK SALFRV+ + P+ LQPR A+L+K FG RL+WGSDFPFV+ G G +D + + V + G +AL G A
Sbjct: 1 MIDSHLHVWSDG-GKYPWEVP--PPDELKSEATYEKLIAAARRAGVSGALIVQPANHKYDHSYVESALRSEPSFFRGMCLANPTLPTAQAVETLEALHAAGFVGVRFNPYLFPDG---MDSDVGRALYAKAGELGMPVGVMAFGGFPAQLSAIKALLHHSAKTSLIIDHFGFYRQPATGGLLSDAAANDETAWGSLLELAASPQVYVKVSALFRVSAELPPHLDLQPRLASLLKAFGPNRLMWGSDFPFVTLG--GQTRTQDALTYEQAAAVPSFWSVEGLDGAAMEALMGGTA 286
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A7S2RW45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW45_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.570e-80 Identity = 130/288 (45.14%), Postives = 181/288 (62.85%), Query Frame = 2
Query: 131 PRFMIDSHLHVWGDGKGSFPYAEGQEPPERLRASSSPEVLIQEMDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQDGENDEAAWEQLLALAKYPQVFVKTSALFRVAKDAYP----YQSLQPRFAALIKHFGSKRLLWGSDFPFVSDGQCGYGPAKDVVCGSMSLTDEEVHNITGGTAQALFGSW 982
P +IDSH+HVW +G+G+FPYAEGQEP E +R E L+Q+MD++ V ALIVQPIN+KFDHSY+L + P +FKGMCL +P+ S AC+ L ++ G VRFNPYLWPEG E + ++ G A + KAG+LGM VG+MCFKGFG H EIE L+ P TK ++DH GF+ Q+G E +E+LL L ++P V++K SA FR ++ + Y + R +I FG R++ GSD+PFV G + ++ E + GTA+++FG W
Sbjct: 72 PDLLIDSHVHVWSNGEGAFPYAEGQEPDEDIRELGLVETLLQKMDDSCVSSALIVQPINHKFDHSYLLKVIKDHPTRFKGMCLLDPNQSQPQACSFLSKMATSGIVGVRFNPYLWPEG-EKINNEVGAAAFEKAGDLGMAVGIMCFKGFGLHAAEIEDLVARFPNTKCIIDHMGFYRQNGVVAEEDFERLLELERFPNVYIKASAFFRNSQYDWSGEVGYPDVGRRLKRIIDTFGGSRVMLGSDYPFVHLHGGYSGNLMLAYHWKLDISSETFQMLIRGTAESVFGEW 358
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A7S3ZEF1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZEF1_9EUKA) HSP 1 Score: 262 bits (670), Expect = 2.260e-80 Identity = 136/289 (47.06%), Postives = 182/289 (62.98%), Query Frame = 2
Query: 140 MIDSHLHVWGDGKGSFPYAEGQEPPERLRASSSPEVLIQEMDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQD--GEND------EAAWEQLLALAKYPQVFVKTSALFRVAKDAYPYQSLQPRFAALIKHFGSKRLLWGSDFPF--VSDGQCGYGPAKDVVCGSMSLTDEEVHNITGGTAQALFG 976
+IDSH+HVWGDG+ +PY P+ LR+ + ++ A V GALIVQPINYK+DH+YV + K+P +KGM LANP P+ A L+ L G+ ++RFNPYLW M DD+G A+Y +AG+ GM VGVMCFKG +H+ +I+ALL SP+T LV+DH+GFF Q G D E AW+ LL+L++YPQV VK SALFRV+ + PY+ L+PR LIK FG RL+WGSD+P+ ++ G C A L + + H I GG A A+FG
Sbjct: 9 VIDSHIHVWGDGQDPYPYDNPT--PDALRSICDGDKFVKNAKNAKVSGALIVQPINYKYDHTYVTKQLKKYPSFYKGMALANPVTPPEQAGVYLDGLQKDGYVALRFNPYLWSGS---MADDSGKAIYKQAGQKGMAVGVMCFKGLSQHINDIKALLDHSPETTLVIDHWGFFRQPATGGTDPETKVSEEAWKDLLSLSEYPQVNVKLSALFRVSGEESPYEDLRPRLNDLIKAFGPGRLMWGSDYPYALMNGGYCASVDALRKWDSDKLLDESDFHKICGGNAAAVFG 292
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A7S1BE33_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BE33_9STRA) HSP 1 Score: 264 bits (675), Expect = 3.970e-80 Identity = 138/303 (45.54%), Postives = 191/303 (63.04%), Query Frame = 2
Query: 98 TIFQVQAFSVGPRFMIDSHLHVWGDGKGS--FPYAEGQEPPERLRASSSPEVLIQEMDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEGMKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQDGENDEAAWEQLLALAKYPQVFVKTSALFRVAKDA--YPYQSLQPR-FAALIKHFGSKRLLWGSDFPFVSDGQCGYGPAKDVVCGSMSLTDEEVHNITGGTAQALFGSWADG 991
T+ + + S +IDSHLHVW D + S FPY+ G EPP L ++S LI+ M GV GALIVQPIN+K+DHSYV +A++ P FKGM L +PS ++A +LE+L GF VRFNPYLWPEG D VA+ + +L +P+G+MCFKG H +I +L+ SP T +V+DHFGF D + D+ +E+LL+LA+ V VK SALFR+A D +PY+ ++ R F L++ +G+ RLLWG+DFPFV + + GY A DVV + ++ I GGT++ LFG W G
Sbjct: 61 TMMPMSSSSSANPVVIDSHLHVWADEEESKIFPYSPGSEPPPALANAASAARLIETMKSCGVAGALIVQPINHKYDHSYVAEAIAAHPSVFKGMMLHDPSRDAEEAVQDLEQLLLDGFVGVRFNPYLWPEGKRMSDDPAAVAMCRRCADLKVPIGIMCFKGLDLHYDDICSLIRKSPDTPIVLDHFGFTGLDEKGDKN-FEKLLSLAEKKNVHVKISALFRIAGDVSPFPYEDVRRRRFVPLLERYGASRLLWGTDFPFVIETEGGYEGAVDVVRSWCGVEQKDAAAILGGTSENLFGKWGGG 362
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Match: A0A1Z5J9Y8_FISSO (Amidohydro-rel domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9Y8_FISSO) HSP 1 Score: 262 bits (669), Expect = 7.280e-80 Identity = 141/303 (46.53%), Postives = 191/303 (63.04%), Query Frame = 2
Query: 98 TIFQVQAFSVGPRFMIDSHLHVWG---DGKGSFPYAEGQEPPERLRASSSPEVLIQEMDEAGVGGALIVQPINYKFDHSYVLDAVSKWPGKFKGMCLANPSLSPQDACAELERLHDQGFCSVRFNPYLWPEGGEG----MKDDTGVALYGKAGELGMPVGVMCFKGFGRHVKEIEALLLSSPQTKLVVDHFGFFLQDGENDEAAWEQLLALAKYPQVFVKTSALFRVAKDAYPYQSLQPR-FAALIKHFGSKRLLWGSDFPFVSDGQCGYGPAKDVVCGSMSLTDEEVHNITGGTAQALFGSW 982
T+ + +IDSHLHVW + FPY Q+PP+ L+ +S L++EM+ AGV GALIVQPIN+KFDHSYV+ A+ +P +FKGM L +PS+S DA A+L+ L ++GF VRFNPYLWP+ GE M G+ALY + GEL MPVG+MCF+G H +I ALL +S +T L++DHFGF D + A ++QLL+LA+YP V+VK SA FR+ D P+ ++ R F L+ FG+ RL++GSDFPFV + GY V S + E I GGTA+ +FG W
Sbjct: 24 TVMSLSGIGPNRIKVIDSHLHVWASPEEAAAKFPYV--QDPPDSLKDRASASCLLREMEAAGVDGALIVQPINHKFDHSYVIHAIQTYPDRFKGMMLFDPSMSETDAMAQLQELKEKGFVGVRFNPYLWPKLGEKKWSPMSQGVGLALYKRCGELKMPVGIMCFQGLDLHFDDILALLAASSETTLILDHFGFTALDSD---ATFDQLLSLAQYPNVYVKISAWFRL-NDNPPFTDVRERRFIPLLNAFGADRLMYGSDFPFVLEQPSGYSMVHLV--SSWIENENERRAIMGGTAERVFGVW 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.274.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.274.2 >prot_P-littoralis_Contig8.274.2 ID=prot_P-littoralis_Contig8.274.2|Name=mRNA_P-littoralis_Contig8.274.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=328bp MLGVTALATGIHGRWRSGGLWVTFIGVITIFQVQAFSVGPRFMIDSHLHVback to top mRNA from alignment at P-littoralis_Contig8:1155252..1169374+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig8.274.2 ID=mRNA_P-littoralis_Contig8.274.2|Name=mRNA_P-littoralis_Contig8.274.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=14123bp|location=Sequence derived from alignment at P-littoralis_Contig8:1155252..1169374+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig8:1155252..1169374+ >mRNA_P-littoralis_Contig8.274.2 ID=mRNA_P-littoralis_Contig8.274.2|Name=mRNA_P-littoralis_Contig8.274.2|organism=Pylaiella littoralis U1_48|type=CDS|length=984bp|location=Sequence derived from alignment at P-littoralis_Contig8:1155252..1169374+ (Pylaiella littoralis U1_48)back to top |