prot_P-littoralis_Contig8.270.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.270.1
Unique Nameprot_P-littoralis_Contig8.270.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length385
Homology
BLAST of mRNA_P-littoralis_Contig8.270.1 vs. uniprot
Match: A0A6H5KEE9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEE9_9PHAE)

HSP 1 Score: 504 bits (1299), Expect = 2.550e-176
Identity = 269/385 (69.87%), Postives = 308/385 (80.00%), Query Frame = 0
Query:    1 MDLKGVVKGHLEHLGREIKSLIRHSKPGVGKIAPATCWSTNSEDVDVAITVIKAASQSIHDGVTRLNLVYKANPSEAASQSMAAEMGGFCQQMLASLTLLSSVGGSKAMVAYYSAGVRAVLHSLKDLIDAVLEPARHAHLNGLTGTVWQACKDLQQAPKTNKLACRRQMMQWSVAIKDTIDEFVEAAKAAALANVDKPGASKDAPPDHEEFAAKVTVGGDESGE-GGRPDHDDFNFDDMDEDYCSMELKCVEASIDILRVFRRCLKEANESLNTLDSAQSDGADGGAATGSPGKEWLQGKLEWAQSVQAHLEDANEFAGEVGILLYPPLDGGELLDRAKDLTGSINAFCDSFFACKEGGDTEREASLRMAVQDKLGVLRAAVETL 384
            M+L G VKGHLE LG+EI +LI HS  G G     TCWS NSEDVDVA+ VI AASQSIHDGVTRLNLVYKANPSE AS+SM+ EMGGFCQQM+ASLTLLSSVG SK+MV Y+SAGVRAVLHS+KDLI A+L+P+RHA LNGLTGTVWQ CK+LQQAPKTNKLACRRQMMQWSVA+KDTIDEFVEAAK AA+AN  K  ++ D     E+FAAKVTVGG   GE G     DDF+FD MDE+Y + EL CVEAS+D+LRVFRRCLK AN+SLN+LDS +    + GA  G  G+ WLQGKLEWA+SVQ HL+DANE AGEVG+LLYPPLDGGELL RA DL  S+ AF + F A  EG ++E E+ LR AV +KLGVLRAA+E L
Sbjct:    1 MELNGAVKGHLEGLGKEIDALIGHSMYGKGGTYSPTCWSKNSEDVDVALRVIGAASQSIHDGVTRLNLVYKANPSEVASESMSREMGGFCQQMVASLTLLSSVGASKSMVTYFSAGVRAVLHSVKDLIGALLDPSRHARLNGLTGTVWQTCKELQQAPKTNKLACRRQMMQWSVAVKDTIDEFVEAAKTAAMANAGKSESAGDKGGLDEQFAAKVTVGGAGEGEVGAEGTFDDFDFDGMDENYGAAELSCVEASVDVLRVFRRCLKAANDSLNSLDSPEPQ-EESGATAGPAGEGWLQGKLEWAKSVQTHLDDANECAGEVGVLLYPPLDGGELLGRANDLEKSLAAFFEVFSAGGEGTNSEMESPLRKAVVEKLGVLRAALEKL 384          
BLAST of mRNA_P-littoralis_Contig8.270.1 vs. uniprot
Match: A0A836CN71_9STRA (Grap2 and cyclin-D-interacting-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN71_9STRA)

HSP 1 Score: 131 bits (329), Expect = 7.710e-31
Identity = 117/371 (31.54%), Postives = 175/371 (47.17%), Query Frame = 0
Query:   26 KPGVGKIAPATCWSTNSEDVDVAITVIKAASQSIHDGVTRLNLVYKANPSEAASQSMAAEMGGFCQQMLASLT--LLSSVGGSKAMVAYYSAGVRAVLHSLKDLIDAVLE-PARHAHLNGLTGTVWQACKDLQQAPKTNKLACRRQMMQWSVAIKDTIDEFVEAAKAAALANVDKPGASKDAPPDHEEFAAKVTVGGD-ESGEGGRP-----DHDDFNFDDM---------DEDYCS-MELKCVEASIDILRVFRRCLKEANESLNTLDSAQSDGADGGAATGSPGKEWLQGKLEWAQSVQAHLEDANEFAGEVGILLYPPLDGGELLDRAKDLTGSINAFCDSFFACKEGGDTEREASLRMAVQDKLGVL 377
            KP V        W+T S+ + VA++V+  A+ SI    TR  L++K  P    +  M  EMG     + +SL   L    G S ++       VRAV  +L +L+ +V   P+     N LTG +W+ACK + + P TNKLA R Q+M  S++IKDTIDEF  A +AA  A+    G         E  A  ++   D +S E G+      D    +FDD+         DED  S  E +   A +++LR  R C+K AN+++              AATGS      +G + WA  +   ++   E  G+VG+ LYPP++G  ++  A      + A  D   A +E     R+A+   AV+   GVL
Sbjct:   31 KPHVPPQWQLMSWATPSDSLKVALSVMLTAANSISGSSTRFTLLFKTAPPPEITAGMVNEMGSLSDHLASSLAVALAPEQGVSPSLAVAIIGAVRAVQVALLELVKSVAAGPSTEPEWNHLTGALWEACKGVAEVPTTNKLAVRMQLMCVSMSIKDTIDEFKAALEAAEAADGGLSG---------EVSALSISGSADNQSHEPGKTADSARDEAVDSFDDLVDYMDGEGADEDAMSPAEAEAAAAVVELLRTSRACIKTANDAM-------------AAATGSGA---ARGVMAWAGPLCEEVQSLAEQVGDVGMALYPPMEGAAVVAAADGFGARVTACLDKVDAAQE-----RDAA---AVEHLRGVL 368          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEE9_9PHAE2.550e-17669.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CN71_9STRA7.710e-3131.54Grap2 and cyclin-D-interacting-domain-containing p... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13324GCIPcoord: 53..346
e-value: 8.7E-20
score: 71.4
NoneNo IPR availableGENE3D1.20.1410.10I/LWEQ domaincoord: 156..383
e-value: 1.7E-11
score: 46.3
NoneNo IPR availableGENE3D1.20.1420.10Talin, central domaincoord: 9..154
e-value: 3.1E-6
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..215
IPR026907Cyclin-D1-binding protein 1PANTHERPTHR15492CYCLIN D1-BINDING PROTEIN 1coord: 8..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:1152303..1155098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.270.1mRNA_P-littoralis_Contig8.270.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 1149952..1155133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.270.1 ID=prot_P-littoralis_Contig8.270.1|Name=mRNA_P-littoralis_Contig8.270.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=385bp
MDLKGVVKGHLEHLGREIKSLIRHSKPGVGKIAPATCWSTNSEDVDVAIT
VIKAASQSIHDGVTRLNLVYKANPSEAASQSMAAEMGGFCQQMLASLTLL
SSVGGSKAMVAYYSAGVRAVLHSLKDLIDAVLEPARHAHLNGLTGTVWQA
CKDLQQAPKTNKLACRRQMMQWSVAIKDTIDEFVEAAKAAALANVDKPGA
SKDAPPDHEEFAAKVTVGGDESGEGGRPDHDDFNFDDMDEDYCSMELKCV
EASIDILRVFRRCLKEANESLNTLDSAQSDGADGGAATGSPGKEWLQGKL
EWAQSVQAHLEDANEFAGEVGILLYPPLDGGELLDRAKDLTGSINAFCDS
FFACKEGGDTEREASLRMAVQDKLGVLRAAVETL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026907CCNDBP1