prot_P-littoralis_Contig8.267.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.267.1
Unique Nameprot_P-littoralis_Contig8.267.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length241
Homology
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: D7FKX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX2_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 1.280e-100
Identity = 178/240 (74.17%), Postives = 196/240 (81.67%), Query Frame = 0
Query:    1 MALRSLGRAGVEMGARLAGEGCRGLRGGASHTTRNLVGAERKMSSSFVGEGQGQFGRSQAPSFRQGSLGAGTQLFKLVETDLMSKELTRYGPSDAEHLGLHSIQDVLSDIAAATFAPQEPAAPIAPATAPSVEVVPVSASVQEEPAAAPAAREEEVLAAWGLGPVATETSEADGLQAPAVGEVEEEEEGVSKEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI 240
            MALRSL RAGVEMGAR+ G G +  R    H TR++ GAERKMSS  VG+G G     +APSFRQGSLGAGTQLFKLVETDLMSKELTRYGP+DAEHLGLHSIQDVLSDIAAAT  P + AAP   A APS EV  V A+  EEPAAAPA REEEVLAAWGLGPV T+ SE +G+QAP VGEV EE   VS EK+AIKRTYQPSTLKRKRKHGFLYRAKTRLGKKI++RR++KGRWR+GI
Sbjct:    1 MALRSLSRAGVEMGARVVGTGSKCCR--VPHATRHVGGAERKMSS-VVGQGPGH----RAPSFRQGSLGAGTQLFKLVETDLMSKELTRYGPADAEHLGLHSIQDVLSDIAAATLTPHKLAAPAVTAVAPSAEVASVPAT--EEPAAAPAVREEEVLAAWGLGPVVTDGSEVEGIQAPPVGEVGEEGGEVSNEKVAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKILRRRQDKGRWRLGI 231          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: Q013P8_OSTTA (Ribosomal protein L34, conserved site n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q013P8_OSTTA)

HSP 1 Score: 61.6 bits (148), Expect = 3.800e-9
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0
Query:  175 LQAP-AVGEVEEEEEGVSKE-KMAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRI 238
            ++AP A GEVE EEEGV +   +A KRTYQPS L RKR+HGF  R +T  G+KI+ RRR KGR R+
Sbjct:    5 IEAPGASGEVEIEEEGVGEAMSLATKRTYQPSNLVRKRRHGFRTRLRTADGRKILSRRRRKGRRRL 70          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: A0A836CKK1_9STRA (Ribosomal protein L34-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKK1_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.590e-8
Identity = 58/159 (36.48%), Postives = 80/159 (50.31%), Query Frame = 0
Query:   83 MSKELTRYGPSDAEHLGLHSIQDVLSD---IAAATFAPQEPAAPIAPATAPSVEVVPVSASVQEEPAAAPAAREEEVLAAWGLGPVATETSEADGLQAPAVGEVEEEEEGVSKEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRI 238
            M +++  +  ++A  LGL SI D+L+D   I  A F   E  +  A            SA    E    PAA E EV         A E     G+   A G ++E E  +    +A+KRT+QP+TL+RKRK GFL R   + G+KI+QRRR KGR R+
Sbjct:    1 MQEQIRNFVTAEARGLGLLSISDILADFDRITLADFRRGEYGSARA-----------ASADAAHEVTLPPAAHEVEVEVVAPAASAAVEQQRV-GVPEDAGGAIQEPE--MKPAVLAVKRTFQPNTLRRKRKLGFLARVGDKNGRKILQRRRNKGRTRL 145          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: RL34_THEAB (50S ribosomal protein L34 n=7 Tax=Thermotogales TaxID=2419 RepID=RL34_THEAB)

HSP 1 Score: 58.9 bits (141), Expect = 1.970e-8
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  197 IKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI 240
            +KRTYQPS +KRKR HGFL R KT  G+K+++ RR KGRWR+ +
Sbjct:    1 MKRTYQPSRIKRKRTHGFLARKKTAGGRKVLKNRRRKGRWRLAV 44          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: D0N2K4_PHYIT (Uncharacterized protein n=22 Tax=Phytophthora TaxID=4783 RepID=D0N2K4_PHYIT)

HSP 1 Score: 61.6 bits (148), Expect = 1.980e-8
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0
Query:  178 PAVGEVEEEEEGVSKEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI 240
            P +GE+E   E +++   AIKRTYQPS L+RKRKHGF  R  +  G+K+++RR  KGRWR+ +
Sbjct:   80 PQIGELECPTENLNEPLQAIKRTYQPSVLRRKRKHGFRTRRVSISGRKVLKRRFNKGRWRMSL 142          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: A0A7V3ZUN1_9BACT (50S ribosomal protein L34 n=1 Tax=candidate division WOR-3 bacterium TaxID=2052148 RepID=A0A7V3ZUN1_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 2.020e-8
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
Query:  198 KRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI 240
            KRTYQPS +KRKR HGFL R +T  G+K+++RRR+KGRWR+ +
Sbjct:    3 KRTYQPSRIKRKRTHGFLVRMRTPGGRKVLKRRRQKGRWRLTV 45          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: H3GDB5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDB5_PHYRM)

HSP 1 Score: 61.2 bits (147), Expect = 2.470e-8
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0
Query:  178 PAVGEVEEEEEGVSKEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI 240
            P +GE+E   E +++   AIKRTYQPS L+RKRKHGF  R  +  G+K+++RR  KGRWR+ +
Sbjct:   75 PQIGELECPTESLNEPLQAIKRTYQPSVLRRKRKHGFRTRRVSISGRKLLKRRFNKGRWRMSL 137          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: A0A2N7Q8D5_9BACT (50S ribosomal protein L34 n=5 Tax=cellular organisms TaxID=131567 RepID=A0A2N7Q8D5_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 2.740e-8
Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  197 IKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI 240
            +KRTYQPS +K KRKHGF  R KTR G++I++ RR+KGRWR+ +
Sbjct:    1 MKRTYQPSRIKMKRKHGFRARMKTRSGRRILKNRRKKGRWRLTV 44          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: A0A6A3SIW2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SIW2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.500e-8
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0
Query:  178 PAVGEVEEEEEGVSKEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI 240
            P +GE+E   E +++   AIKRTYQPS L+RKRKHGF  R  +  G+K+++RR  KGRWR+ +
Sbjct:   76 PQIGELECPTETLNEPLQAIKRTYQPSVLRRKRKHGFRTRRVSISGRKVLKRRFNKGRWRMSL 138          
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Match: A0A225WNF3_9STRA (Ribosomal protein L34 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNF3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.650e-8
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  176 QAPAVGEVEEEEEGVSKEKMAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI 240
            Q   +GE+E   E V++   AIKRTYQPS L+RKRKHGF  R  +  G+K+++RR  KGRWR+ +
Sbjct:   76 QLDQIGELECPTESVNEPLQAIKRTYQPSVLRRKRKHGFRTRRVSISGRKVLKRRFNKGRWRMSL 140          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX2_ECTSI1.280e-10074.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
Q013P8_OSTTA3.800e-959.09Ribosomal protein L34, conserved site n=2 Tax=Ostr... [more]
A0A836CKK1_9STRA1.590e-836.48Ribosomal protein L34-domain-containing protein n=... [more]
RL34_THEAB1.970e-861.3650S ribosomal protein L34 n=7 Tax=Thermotogales Ta... [more]
D0N2K4_PHYIT1.980e-850.79Uncharacterized protein n=22 Tax=Phytophthora TaxI... [more]
A0A7V3ZUN1_9BACT2.020e-862.7950S ribosomal protein L34 n=1 Tax=candidate divisi... [more]
H3GDB5_PHYRM2.470e-850.79Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2N7Q8D5_9BACT2.740e-861.3650S ribosomal protein L34 n=5 Tax=cellular organis... [more]
A0A6A3SIW2_9STRA3.500e-850.79Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A225WNF3_9STRA3.650e-850.77Ribosomal protein L34 n=1 Tax=Phytophthora megakar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000271Ribosomal protein L34PFAMPF00468Ribosomal_L34coord: 198..238
e-value: 4.4E-17
score: 61.8
IPR000271Ribosomal protein L34TIGRFAMTIGR01030TIGR01030coord: 198..238
e-value: 1.1E-15
score: 55.5
IPR000271Ribosomal protein L34PANTHERPTHR14503MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBERcoord: 168..238
IPR000271Ribosomal protein L34HAMAPMF_00391Ribosomal_L34coord: 197..240
score: 13.320571
NoneNo IPR availableGENE3D1.10.287.3980coord: 195..239
e-value: 1.3E-16
score: 62.1
NoneNo IPR availablePANTHERPTHR14503:SF439S RIBOSOMAL PROTEIN L34, MITOCHONDRIALcoord: 168..238
IPR020939Ribosomal protein L34, conserved sitePROSITEPS00784RIBOSOMAL_L34coord: 198..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:1131750..1144201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.267.1mRNA_P-littoralis_Contig8.267.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 1131610..1145280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.267.1 ID=prot_P-littoralis_Contig8.267.1|Name=mRNA_P-littoralis_Contig8.267.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=241bp
MALRSLGRAGVEMGARLAGEGCRGLRGGASHTTRNLVGAERKMSSSFVGE
GQGQFGRSQAPSFRQGSLGAGTQLFKLVETDLMSKELTRYGPSDAEHLGL
HSIQDVLSDIAAATFAPQEPAAPIAPATAPSVEVVPVSASVQEEPAAAPA
AREEEVLAAWGLGPVATETSEADGLQAPAVGEVEEEEEGVSKEKMAIKRT
YQPSTLKRKRKHGFLYRAKTRLGKKIMQRRREKGRWRIGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000271Ribosomal_L34
IPR020939Ribosomal_L34_CS