mRNA_P-littoralis_Contig8.258.45 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: D7FKW9_ECTSI (Similar to Ubiquitin carboxyl-terminal hydrolase 15 (Ubiquitin thiolesterase 15) (Ubiquitin-specific processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) isoform 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW9_ECTSI) HSP 1 Score: 2726 bits (7065), Expect = 0.000e+0 Identity = 1488/2117 (70.29%), Postives = 1637/2117 (77.33%), Query Frame = 3
Query: 222 MGCCSSQPSQAPTGRGAFPAPLPPPMQDNMNELLNRWRHGEVNLLQRRFRLARAQAVKHTIASKILG-LATASSNSGTATSAATSANREGSPSFREDGSTSPASRDGAS---AELDGKKQGESTAGAP-KVGVGSNEAGQVASMGDARGGRAGMDKEAFLRVFPDVQGLPVEVQRSSFRLFDCVGRGSLDFRNFCRALALSCRGSREERLRFLFDLYSGPSQPKHYGTGADGGARDATSASGATSASMSEAELAGLKKQLGLSAGDANHTQFQTTAGGSGLQLSEYFEWAEVHASDEALDRALRPFYLLPSPQQEKDKVLAHLMEHTIEEGHCMCLVAAPWWSYWSNYAGLTKEDVLRVPERLALGLDKTVRFLDRAPADGPFVAVGANGGDAAASSWGATAIAKDAGGGAASRADGSSGNGQTHRGAHVTETMEKMGKESAVPSMLARRPHEIDNSGLQGGAEWEVAPNLSLGDDYVMLPKPLWDVMCDWYGGGPVFSRQVVKVSSNLQLPEKARRGVDENGAGSTADRLTVDLYPLALHVSLCDTSGRPGGRERLVLTSHHVHVRDMLVEALGGSHQQGFRRGVSLGAIPNTQEGPVSEYEDGRQEQQQRSEEDGSVSEQDVSPRLD--SRNPAEHVRLWVLERSRSGLIDTPRTHM-ASAPGACRPRFNYSGGQVLGGVDQQTGLDRWKLVKVEEEGMTLSALGLVGGEKVMLEHKTREGKWPRYRYIEDPGFRQFRENDRVDAMDYQGRWFQGQVVEVGSKSSSKIMDLEGPVGRKKSNRRQRHEIEQTIQDPGRESATQELEPFEPGDFSEGNDGRTAARAVDVKTGPPPGKRQHRSSGREGARGVKNGGREG-REAGSSRRRMRVRVHFDRFAPQWDEWYDSKSLKLAPESSHTAPFVPVPPALRPTDEGNGDTAEAGEETSPKSTAVRGGAGVPS-SSSKSGGSALPLPVGRFSGDPSNGSSWNGRSQSMPRTNGAGGNXXXNADGISNYGGGALNRRSSTPGKPPIAGACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEG-SGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPRIRTRYFVTQDGVDAEDGGKLCHGSAAEFSNPRQLVPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQAKVLQDKELLTELRDNQ-VIALEM-GESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATA--------ALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHRKTVRVPASGAHGQPANARNGAGSGMRLEGDVDGRDAKEPPAGFVTSKELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRPDIKSAWVARAAVGLEGGISDEKLAQLLPFTVKFVLKQNPLTEVCSVELVPDKWRAASSLVCQKLILALEWKDPARDYFDVLAATFKHPSFLELENNAQSVLSGLTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVTGWGLEHPWLNYDDEFVEVKNKLSHKVASSVVQGYADEPCFVASHRSNILQRSCRQG*AWRTSHGVF*KGAIRAKVSVISPQSILQRQHRHLPW*CLIVFYHVTRSSSTFLASDRLSFMFFAPQEMAPDKIVSEAAYVLFYRRRRLTPSNVINMTI 6509
MGCCSSQP+Q P+G FP PLP PMQDNMNELLNRWRHGEVNLLQR FRL RAQAVKHTIASK+ G LA SSNSGTATSAATSANR+ S SF EDGS SPASRDGA+ AELDGKK G+ G P KVG GS E GQV S+GD+ G RAGMDKEAFLRVFPDVQGLPVEVQRS+F LFDCVGRGSLDFRNFCRALAL CRGSREERLRFLFDL+SG SQPKHYGTGADGGARDA+SASGAT+A +S+AEL GLKKQLGLSAGDANH FQ T+G SGL LSEYFEWAE+HASDEALDRALRPFYLLPSPQQEKDKVLAHLME+ IEE CMCLVA+PWWSYWSNYA LTKEDVLRVPER ALGLDKT +LD+ PAD P V +GA GGD A G G AS G+ GNG + E + GKE AVP+ LARRPHEIDNS LQGGAEWEVAPNL LG+DYVMLPK LWDVM DWYGGGPVF+RQVV VSSNL+LPEKAR G D+ A + RL VDLYPLALHVS+CD +GRPGGRERLVLTSHHVHVRDML + L S QG RG+S+ A QE PV E D QEQ+ SEE V + + R D S+N VRLWVLE S SGLIDTPR H +SAPG CRPRF+Y GG+ LGGVD Q+GLDRW+LVK EEEGMTLSALGL+GGEKVM+E+K +GKW R +YIE PGFRQFRENDRVDAMDYQGRWF+GQVVEVGSKSSSKI+D EGPVGRKKSNRRQR E++ ++P RE A QE+E EPGD S+ N+GR+AA+A ++ RSSG+E GV GG+EG R+ G SRRR+RVRVHFDRFAPQWDEWYDSKSLKLAPE SHTAP VP PPALRPT+EGNGDT EA EE SP +TA+RGG G P+ SSSK GG+ P PVGRF GD SNG+ W RSQSMPRTNG G ADGISNYGGGALNRRS+TPGKPP+ GACGLVNVGNTCYLNSAVQCLSHTPL+RAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYV AP++D++ SGRS+Q+LADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEK+V VVMLPRIRTRY V G++ EDG G A+FSNPRQLVPVQYGMMLPRLGELSDLK+AL+DL GIP S+VVA+L ++Q KV+QDKELLTELRD+ V+ALEM GE RR P+TSAS QATVS VPTPT S PT P+ A A AL E+E V E E T +GT V +P ++G S++ A +GGAA A+ Q + EG GV E A E SDGSE E TDLD+D RPPTS PD RTPDERC +SFP +LR+LE+GWRLDALDG+G W+AATVV++ P+A+ + R GDK SK S + +G+DQK KTEYLV+VHFD F ++WDESYGE EWREKKLQPL TK+R RT DIPVVHRKT+RVP SGAH QPA+ R+G G MR EGD D RD KEPP GFVT+K+LFGLPFLVRCPPARSTR+LWRLVVQQASR+VAGS+GGRS KAG KDR A+A++G+ +QRPD+ +AWVARAA GLE I+DEKLAQLLPFTVKFVLKQNPLTEVCSVELVPD+WRAASSL+C KLILALEWKDP RDY DVLAATF+HPS+LELENNAQSVLSGLTLEQCLDAYTREET EEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLV+FPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDL+GVVNHMGGMTGGHYTA CRSSPCSKDGVEEVTGWGLEHPWLN+DDEFVE EMAPDKIVS+AAYVLFYRRRRLTPSNVINMTI
Sbjct: 1 MGCCSSQPAQPPSG--GFPTPLPAPMQDNMNELLNRWRHGEVNLLQRSFRLGRAQAVKHTIASKMFGSLAAPSSNSGTATSAATSANRDRSASFGEDGSASPASRDGAATATAELDGKKPGDGATGGPLKVGAGSGEGGQVVSLGDSGGARAGMDKEAFLRVFPDVQGLPVEVQRSAFLLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSGASQPKHYGTGADGGARDASSASGATTARLSDAELVGLKKQLGLSAGDANHAHFQKTSGVSGLLLSEYFEWAELHASDEALDRALRPFYLLPSPQQEKDKVLAHLMEYAIEEAQCMCLVASPWWSYWSNYAALTKEDVLRVPERTALGLDKTPGYLDQRPADEPAVTLGAEGGDVAVRPGDVV------GDGVASMGVGN-GNGHAQGESPAMERLAGAGKERAVPTTLARRPHEIDNSSLQGGAEWEVAPNLDLGEDYVMLPKSLWDVMVDWYGGGPVFARQVVNVSSNLELPEKARGGGDDAEAEPSTARLAVDLYPLALHVSMCDPAGRPGGRERLVLTSHHVHVRDMLADVLDSSRLQGMSRGLSMTAATIPQEDPVLENADVVQEQRL-SEEGDVVGDGETPLRRDVSSQNRTGQVRLWVLEISTSGLIDTPRVHAPSSAPGFCRPRFSYGGGRELGGVDPQSGLDRWRLVKTEEEGMTLSALGLIGGEKVMVENKNPDGKWQRRKYIESPGFRQFRENDRVDAMDYQGRWFRGQVVEVGSKSSSKIVDSEGPVGRKKSNRRQRLELDPPTEEPVREGANQEVEHLEPGDASDRNEGRSAAKAGAGRSXXXXXXXXXRSSGKERDGGV--GGKEGPRQGGPSRRRLRVRVHFDRFAPQWDEWYDSKSLKLAPEFSHTAPAVPAPPALRPTNEGNGDT-EAEEEASPDATAIRGGVGAPAPSSSKPGGNTFPPPVGRFPGDASNGNGWGARSQSMPRTNGTG----STADGISNYGGGALNRRSNTPGKPPVPGACGLVNVGNTCYLNSAVQCLSHTPLVRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDDDAESGRSDQDLADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKMVAVVMLPRIRTRYLVRSSGLNGEDGAMASDGGGAQFSNPRQLVPVQYGMMLPRLGELSDLKRALSDLCGIPTVSIVVAILQQNQIKVMQDKELLTELRDDTWVVALEMQGEINLNRRAKPSTSASRQATVSPVPTPTSSGPTKPEAATAAGXXXXXXAALSEEELPVGTEAEPTEPSNTTSGTPAPNV--VVPVENGGSTTAAKGEGGAAE-SAEEGQGVSPEPLKETLKEGLGVPET-----AAAEARSDGSEDEEAEE-----------TDLDND-RPPTSTPDNRTPDERCMSSFPTRLRDLEIGWRLDALDGQGGWYAATVVEINPRAKALDRGGDKPSKASLSGKGEDQKRKTEYLVRVHFDAFTSRWDESYGEQEWREKKLQPLFTKTRRQERTNDIPVVHRKTIRVPTSGAHPQPASTRDGPG--MRSEGDADRRDTKEPPPGFVTAKDLFGLPFLVRCPPARSTRYLWRLVVQQASRFVAGSSGGRSFKAGGKDRTARASSGSRTQRPDVTAAWVARAAAGLERDITDEKLAQLLPFTVKFVLKQNPLTEVCSVELVPDRWRAASSLLCTKLILALEWKDPGRDYLDVLAATFEHPSYLELENNAQSVLSGLTLEQCLDAYTREETFEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVLFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLFGVVNHMGGMTGGHYTAYCRSSPCSKDGVEEVTGWGLEHPWLNFDDEFVE----------------------------------------------------------------------------------------------------------EMAPDKIVSDAAYVLFYRRRRLTPSNVINMTI 1972
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: F0YH03_AURAN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH03_AURAN) HSP 1 Score: 464 bits (1195), Expect = 2.180e-138 Identity = 338/988 (34.21%), Postives = 461/988 (46.66%), Query Frame = 3
Query: 3216 PGKPPIAGACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPRIRTRYFVTQDGVDAEDGGKLCHGSAAEFSNPRQLVPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQ-AKVLQDKELLTELRDNQVI-ALEMGESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHRKTVRVPASGAHGQPANARNGAGSGMRLEGDVDGRDAKEPPAGFVTSKELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRPDIKSAWVARAAVGLEGGISDEKLAQLLPFTVKFVLKQNPLTEVCSVELVPDKWRAASSLVCQKLI-----------------LALEWKDPARDYFDVLAATFKHPSFLELE---------NNAQSVLSGLTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVTGWGLEHPWLNYDDEFVE 6095
PG + GA GLVN+GNTC++NSA+QCLSHTPL+RAY+LS+ +AAE+N+ NPLG+QG++V++FA++L+ LWS Y + PSKFKR L + KPQFAGN+QQDSQEFL EMLD LHEDVNRV++KPYV P++D+ + + A +AWDR++ RNRSVIVDLFQGQLK E +C C KKSV F+PFM+LSVP+P EK +L H ++ + +QL +G+ +PRLGE+ DLK AL++++G+P + V ++ H+ A++L+D E L +RD+ V+ A E E+ P +ATA G++P++R T D + + A +D GAA + +A FP L + +G R+DALD G WF VV + D+S +VHFD F A+WDE YGE+EW++ KL T+SR R +++ VHR+ PA S ELFG PF+VR RS R L+R VV+QA +V R +AAAG +GG +D+ + LPF V NP T LVP+ RA C+ L+ LAL+ + D L KH S LELE +A G+ L CLDA+++EETL E D+W C C+ R KI+ WK+PD+LVIH+KRF CSA+WREKIRT V+FP S LDM+ +V A Q G M YDL+ V NH+GGMTGGHYT+ R+ G ++ WL+ DD+ VE
Sbjct: 77 PGARDLPGATGLVNLGNTCFMNSALQCLSHTPLLRAYVLSEQFAAEINRANPLGSQGRMVDEFANVLRMLWSDRYRSVAPSKFKRALARAKPQFAGNDQQDSQEFLNEMLDVLHEDVNRVVEKPYVEEPDDDDVAK-LTYEVAARDAWDRYLLRNRSVIVDLFQGQLKSEKQCCACGKKSVKFEPFMHLSVPLPSTQEK---------------------------RLKHAASKKRPGEKQLRAAIFGVSVPRLGEVGDLKSALSEVTGVPRADIAVGDVYRHRFARILEDDEPLAAVRDDDVVVAYEKSEAPP--------------------------------SATA------------GKRPSKRATG---------------DAYADADASDDDGAAAAE---------------------------------------------------------------------------------SADFPGDLDGVRVGTRVDALDHRGQWFVGQVVAI-----------DESG-----------------CRRVHFDRFSARWDEWYGENEWKQGKLAAPKTRSRHTVRVIELQCVHRR--------------------------------------PAAGGASLELFGSPFVVRVASDRSCRSLFRAVVRQAWLFV--------------KRDHRAAAG-----------------FPRDGGAADD---ESLPFKVAVGSTANPSTNARRAALVPEDQRAGRD--CEMLLATPTAAVGDAVDDRRMCLALDCTHVTA-FDDPLRHAPKHKSCLELEAAELRDRAEESAGDDDGGIPLSHCLDAFSKEETLSEADAWICPQCKEPRSATSKIEPWKLPDILVIHVKRFLCSAKWREKIRTKVLFPLSALDMAPWVHEE-ARSLQRGA----MTYDLFAVTNHLGGMTGGHYTSYVRAD-------------GGDYRWLHVDDDVVE 775
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: A0A7S3JRX2_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRX2_9STRA) HSP 1 Score: 455 bits (1170), Expect = 1.700e-127 Identity = 522/2059 (25.35%), Postives = 777/2059 (37.74%), Query Frame = 3
Query: 663 GMDKEAFLRVFPDVQGLP-VEVQRSSFRLFDCVGRGSLDFRNFCRALALSCRGSREERLRFLFDLYSG------PSQPKHYGTGAD----------GGARDATSASGA-----TSASMSEAELAGLKKQLGL----SAGDA------------------NHTQFQTTAGGSGLQLS--EYFEWAEVHASDEALDRALRPFYLLPSPQQEKDKVLAHLMEHTIEEGHCMCLVAAPWWSYWSNYAGLTKEDVLRVPERLA-LGLDKTVRFLDRAPADGPFVAVGANGGDAAASSWGATAIAKDAGGGAASRADGSSGNGQTHRGAHVTETMEKMGKESAVPSMLARRPHEIDNSGLQGGAEWEVAPNLSL-GDDYVMLPKPLWDVMCDWYGGGPVFSRQVV---------------------------------KVSSNLQLPEKARR-----------------GVDENGAGSTADRLTVDLYPLALHVSLCDTSGRPGGRERLVLTSHHVHV------------------RDMLVEALGGSHQQGFRRGVSLGAIPNT------------QEGPVSEYEDGRQEQQQRSEEDGSVSEQDVSPRLDSRNPAEHVRLWVLERSRSG--LIDTPRTHMASAPGACRPRFNYSGGQVLGGVDQQTGLDRWKLVKVEEEGMTLSALGLVGGEKVMLEH-KTREGKWPRYRYIEDPGFRQFRENDRVDAMDYQGRWFQGQVVEVGSKSSSKIMDLEGPVGRKKSNRRQRHEIEQTIQDPGRESATQELEPFEPGDFSEGNDGRTAARAVDVKTGPPPGKRQHRSSGREGARGVKNGGREGREAGSSRRRMRVRVHFDRFAPQWDEWYDSKSLKLAPESSHTAPFVPVPPALRPTDEGNGDTAEAGEETSPKSTAVRGGAGVPSSSSKSGGSALPLPVGRFSGDPSNGSSWNGRSQSMPRTNGAGGNXXXNADGISNYGGGALNRRSSTPGKPPIAGACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPRIR-------------TRYFVTQDGVDAEDGGKLCHGSAAEFS-------------------------------------NPRQLVP--VQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQ-AKVLQDKELLTELRDNQVIALEMGESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHRKTVRVPASGAHGQ---------------------------PANARNGAGSGMR-LEGDVDGRDAKEPPAGFVTSK----ELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRP-DIKSAWVARAA-VGLEGGI---SDEKLAQLLPFTVKFVLKQNPLTEVCSVELVPDKWRAASSLVCQKLI------LALEWKDPAR--DYFDVLAATFKHPSFLE--------LENNAQSVLSGLTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNSA----HRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVTGW------GL-EHPWLNYDDEFVE 6095
GM+K L + D + + V + F LFD G + FR+FCRALA CRG+R ERLRFLF L++ Q K G A+ +R + +G TS + + L ++L L + GD+ NH LQLS ++ EW++ H SD +D+AL P +L +P+ E+ + L ++ G + + + WW W+ Y L+ +P + L +D +GN E S +RP EIDNS + + + +L D +++LP+ +W+++ WYGGGP R +V + ++N+ L A+ G N + +D+ VD + + + D PG R R+ + ++ + D L A + + E P + E + ++ S R + VRLW +RS + + T+ AS + P RW+L+ + +L A+G+ + +++E G+WPR + E + DR+DA DY+G+WF G V+E+ E P E + T PP RVRV FD F P+WDEWYD S LAP + N + A + ++ G+P++S LP+ S D S ++ +GR+ N SN GG ++ K + G+ GLVN+GNTCY+NSA+QCLSHTPL+RAY+LS+ ++ EVN+ NPLGTQG++VE+FAS+LK LWS++Y I P+KFKR L K KPQFAGN+Q DSQEFLAEMLD LHEDVNRV++KPYV P++DE S + A EAWDR++ RNRSVIVDLFQGQL E C VC+K+S+ F+ FMYLSVP+P +++V++V+L R R T VD E + P+ +VP V+Y +PRLG +++LK+A+A SGI A+ LV+ + H+ K+ D E L + D + YE TP PP P+ +FP L +G R+DALD G WF VV + G + +V FD F +KWDE YG +++ KL P +T S+ R ++I V+HR+ P Q P A M + D + + ++P S ELFG PF+VR L+ ++ QA +V S + AG +RP +I+ A +A+ V + I ++EK K ++ L+ PD + + ++ ++ + L+W DP D F+ A + PS E +NN Q+V +L CLDA+++EETL +++ W+C C+ +R + +I WK+PD+LVIHMKRF SA WREKI T V FP + LDMS +V +++ H + A M YDL+GV+NH+GGMTGGHYT+ R+ PC++DGVEEV GL ++ WL+ DD+ VE
Sbjct: 68 GMEKSVLLALLNDDRLIRNAAVGDAVFGLFDSSSSGFVSFRDFCRALAWCCRGTRLERLRFLFCLFAMYEQQQLQQQVKEKGIKAEKEIVHNGETNNKSRPVPTYNGLSPDPKTSPRFVKDQRELLHEELALGDLDTEGDSSPKLGRQGLEALLDFCCTNHHHIDLN-----LQLSFNKFIEWSQTHLSDTIVDQALEPLCVLSTPRSERQAIFTALQAAPLQPGDTVFAIDSDWWQRWAKYVQLSSP----LPSAIIQLQVD--------------------------------------------------TGNNNNKYNCTSAE----------YSSSSQQRPDEIDNSLV-------IKKDGALKADAFLLLPRSVWELLSRWYGGGPALPRTIVSCGNVDLHPILVRVSACDRNGEVSLKAATTRIERFAANVNLNNFAKAENVLRAYFFHAACQDKAGFITNHESNQSDQ--VDPLVINSNTKIDDAELTPGQRRRVTILANRLFAGAKAEMDAEIRLALRLDDEDKLYLAKRQAERHAXXXXXXXXXXXXXXXXXXXXXXXXXSESPPTGVALAYPEDESAKDDQQLFSTYGAGERALRFSKKNQVRLWYRRAARSNKDITISASTNKASRTISQHPL-------------------RWRLL----DASSLDAVGIKSMDDILIEFCDPVTGEWPRAKISEISAH--LKVGDRLDACDYRGKWFPGSVIEL------------------------------------------ERSPEEQNNA----------------TSPP---------------------------------RRVRVRFDHFHPKWDEWYDVSSSGLAPLGTRA----------------NQEQANSRKD------------GIPANS------PLPMIKKSLSTDSSESTAQSGRTNQN------------NGLDESNKGGIQRSKNKELAVKDVLPGSTGLVNLGNTCYINSALQCLSHTPLLRAYILSEGYSGEVNRTNPLGTQGRMVEEFASILKQLWSEQYRYIAPNKFKRTLAKLKPQFAGNDQHDSQEFLAEMLDMLHEDVNRVVEKPYVVEPDDDEVDKLTSI-DAAREAWDRYLLRNRSVIVDLFQGQLMSERTCAVCSKRSLKFETFMYLSVPLPAPRDRLVKLVLLTRAEGSKLDLSRLEVPTNRPASTAISVDMPPDNGAISDKTTEINASKIEKRSSWSAMLSKPIEKNETSEEDKSIALNGALLQPKLVVPRVVKYVFEIPRLGTVAELKKAIAKRSGIAASDLVIGDVFRHRFIKLWHDTEPLARMADEDFLV---------------------------------------------AYES------------------------------------------------------------------------------------TPE-----------------------------PPPDAPED---------TFPNTFDALRVGSRVDALDLRGHWFVGMVV-------AINESGQR---------------------RVSFDHFASKWDEWYGPNDF-STKLAPPYTYSKRKARIMEIQVIHRRLRTKPTKTETQQKNSIDYDDDVKQGDNEVCTKEESKELAPCTAETENSEKMNTVSADENEKVRRQPTIPRRPSNPNGVELFGTPFVVRIESDMQVEKLYSKIMNQAQAFV------NPKWRNSLTTLTTEKAGP--KRPFEIRLAALAQPTLVRVVNNIKTSAEEK---------KETVEAQSLSSQEHFSSAPDIFYSGRKVLVTDILDEARGAVTLDWLDPTAYDDCFEASEAA-RDPSCNEHLDDEGRLRQNNGQNV----SLATCLDAFSKEETLSDDNFWFCPKCKVNRHAISRILPWKLPDILVIHMKRFLYSANWREKINTRVDFPLTSLDMSTWVHPDASGCDVHHHGA------MTYDLFGVINHLGGMTGGHYTSYVRAVPCTRDGVEEVASSFPTEEDGLVDYRWLHVDDDLVE 1661
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: A0A8J2SJY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJY2_9STRA) HSP 1 Score: 318 bits (816), Expect = 9.400e-86 Identity = 278/958 (29.02%), Postives = 396/958 (41.34%), Query Frame = 3
Query: 3240 ACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPRIRTRYFVTQDGVDAEDGGKLCHGSAAEFSNPRQLVPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQAKVLQDKELLTELRDNQVIALEMGESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTL---DIPVVHRKTVRVPASGAHGQPANARNGAGSGMRLEGDVDGRDAKEPPAGFVTSKELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRPDIKSAWVARAAVGLEGGISDEKLAQLLPFTVKFVLKQNPLTEVCSVELVPDKWRAASSLVC--QKLILALEWKDPARDYFDVLAATFKHPSFLELENNAQSVLSGLTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVT-GWGLEHPWLNYDDEFVE 6095
A GL N+GNTC+LN+AVQCLSH P++RAY LS+M+A ++N+ + LG+QG++VE FA LL+ L + + +C+ P FK+ L K KPQFAG+EQQDSQEFL E+LD LHEDVN + +KPYVP PE+ +E A +A R R++S+I DLFQGQL + C VC + SV F+PF LS+P+P + V +L A+ +N + V+ + PRLG++ DLK A+A + SL + + H+ + D++ L +G +V T AS + ++ YE+ Q+E A +TPS FP+ EL +G RLDALD + W+ TVV T P D+ +++ FD F AKWDE + +W KLQP ++KS+ G L +I VVHR+ P G LFG PFL R RS R L R V++QAS Y G EG +S V+ ++ L++V ++L A+ S C + +AL W ++T++ P L+ + L CL +++REETL + DSW C C+ I LW+ PDVLVIH+KRF C+ARWREK+RT V FP GLD+S F+ +++ VYDL+GV+NH+G ++GGHYTA + SPCS G EE + + W + DD+ VE
Sbjct: 490 ATGLANLGNTCFLNAAVQCLSHAPILRAYCLSEMYAQDINRTSRLGSQGRVVEAFADLLRQLHASQ-ICVRPEGFKKVLGKCKPQFAGSEQQDSQEFLTELLDVLHEDVNLIQEKPYVPEPEDADEARD-GLVVAARDALRRSRLRDKSLISDLFQGQLVAKKTCKVCARSSVKFEPFTSLSLPVPAPASRSFVVAVL-------------------------RLAKHANGHPSLTVR--VEAPRLGDVRDLKSAIAAEVKLTPDSLTLCDVARHRIYRVLDEDTLP-----------LGALGDFPQV---TDASKRLLIA---------------------YERP----------------------QLELA-------------------------------------------------------KTPS---------------------------------------------IDFPSSFEELAVGQRLDALDHKRQWYVGTVVD----------------DTEPCR---DKNFGKPGYIRIRFDRFSAKWDECFCRDDW-PAKLQPPYSKSK--GNRLAAFEIGVVHRRRAASPKKG---------------------------------------LFGTPFLARVASDRSCRALKRAVLRQASLY------------------------------------------GYEGSVS--------------VISRDSLSDV-DIDL-----DASDSCRCLADRFYIALNWDS---------SSTYREPLSLQKLPPVPTSPRHYDLASCLQSFSREETLSQNDSWRCPRCKKSVEATSSIGLWRTPDVLVIHLKRFLCTARWREKLRTDVSFPRRGLDLSKFLPADAY-----------AVYDLFGVINHLGSLSGGHYTAHVKVSPCSSFGEEEASIAFEESERWFHVDDDLVE 1118
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: A0A7S4QV73_9STRA (Hypothetical protein n=7 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QV73_9STRA) HSP 1 Score: 316 bits (809), Expect = 9.910e-83 Identity = 320/1178 (27.16%), Postives = 480/1178 (40.75%), Query Frame = 3
Query: 3228 PIAGACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAA--EVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPR---IRTRYFVTQDGVDAEDGGKLCHGSAAEFSNPR-QLVPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQAKVLQDKELLTELRDNQVIALEMGESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHRKTVRVPASGAHGQPANARNGAGSGMRLEGDVDGRDAKEPPAGFVTSKELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQR--PDIKSAWVA----------------RAAVGLEGGISDEK----------------------------------LAQLLPFTVKFVLKQNPLTE----VCSVELVPDKW-RAASSLVCQKLILALEWKD--PARD-------------YFDVLAATFKHPSFL-------ELENNAQ----SVLSGLTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVTGWGLEHPWLNYDDEFVEVKNKLSHKVASSVVQGYADEPCFVASHRSNILQRSCRQG*AWRTSHGVF*KGAIRAKVSVISPQSILQRQHRHLPW*CLIVFYHVTRSSSTFLASDRLSFMFFAPQEMAPDKIVSEAAYVLFYRRRRLTPSNV 6494
P GACGL N+GNTCY NSA+QC+S+ PL+R+YLLS + ++NK NPLGT G+L+E+F+ LL+ +WS +Y P++F+ L K + Q++G +QQD+QE L +MLD LHED N+V KPYV A E+D + + EAW R ++RNRS+I ++ GQ+ C VC+ S FDPF LS+P P E + ++ R + + + +G + + + E S P +L+ QY + + RL ++ DLK + ++SGIP L + E DK T V AL E ++ P+T + +T + PT +V E R G S + + + + D +NG ++R E G+ G +QE D D P + R + +P E +LG R+DA+D WF +VV++ D D+S + P E V++HFD F +KWDE+Y +++ +++PL++ + P + + V +R R + LFG + ++C ST ++ QASR++ + K+ SK+ K ++ +R I+ A AA+ G I++E+ L LPF V+ +PL V + P R + + + + L WKD P R Y +A+ K L E N Q +V G+ L CL + +E+ L D W C C+ R G + +W++PD+L H+KRF+CSARWREKI T V FP +GLDMS + S G VYDLYGVVNH GGMTGGHY A C+++ CS DG EE L Y+ F N S +V G+ R R T+ A A+ + SP+ + W L F + + P +VSE AYVLFYRRRR++ SN+
Sbjct: 1279 PGYGACGLSNLGNTCYANSALQCISYMPLLRSYLLSGQYKTNGDLNKDNPLGTGGRLLEEFSDLLRIMWSGKYGSRAPTRFRSQLGKARSQYSGADQQDAQELLNDMLDVLHEDSNKVKKKPYVEALEDDWVKKNHLPR-VGQEAWRRFLRRNRSIIANVAMGQVLNRVTCPVCHHSSTNFDPFNMLSIPFPTVAEVVFRCTVIRRGTALNCKGTLRPNGRNGKSEKEK--NMDMEPSPPSTKLIFEQYVIAMSRLADIGDLKLRIQNISGIPVNRLKLCKSEEIVVNNDIDKSFPTRTYVK-VSALPDKEGPCVQLAKPSTGPEDLSTPAVAPTQ-----------------------IVAFESTLHPRPPRGASNKICQTNACTRGHTHDESSREDXXXXXXXXXXXXIPENGGSKRTLMENLGLY---------------GDDQECVL--------------YDTDPTPLSKAMSR--------SLWPKSSSEFKLGLRVDAIDHRDHWFPGSVVEIIEGVDDSGED-DESMRDIPPV---------ETKVRIHFDNFSSKWDETYSIDQFKRGQVRPLYSHANPRAKPTEFMVHNRHFNRA--------------------------------------IKGNALFGQAYYLQCQNEWSTARAGAHILAQASRFL--QTPRKMDKSSSKNEEDKRREDSNLKRFYQSIEEAKTVLAEVIQILIESDRDYVEAAISNGGDITEERWTHSNRSRQQRSVNSSQVFNASQMSTTLSKRLSTLLPHLPFEVRVCTADSPLGAPQGGVSDEVIFPYSLVRTIGNYMNARHAVVLHWKDKSPGRTSSKKTSSSEYTILYSPPVASVHKQSRALLNGSKGGEASKNGQGKNNAVHGGMHLGVCLTEFCKEQHLPATDCWRCPRCKDVREGKQCMTMWRLPDLLTFHVKRFNCSARWREKITTKVNFPLTGLDMSEWCDKESPAMQ---GPDGSCVYDLYGVVNHYGGMTGGHYVATCKATVCSPDGSEE----------LGYN--FNGTCNGESGAGVETVQSGW----------------RLGRNKDKESTTSQAKLIAAASARAAAESPEPL---------W---------------------LQFDDDLVEPIPPKNVVSEMAYVLFYRRRRISSSNI 2281
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: A0A448Z904_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z904_9STRA) HSP 1 Score: 310 bits (795), Expect = 4.280e-81 Identity = 314/1169 (26.86%), Postives = 479/1169 (40.98%), Query Frame = 3
Query: 3228 PIAGACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPR---IRTRYFVTQDGVDAEDGG-KLCHGSAAEFSNPRQ-LVPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQAKVLQDKELLTELRDNQVIALEMGESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHR---KTVRVPASGAHGQP---------ANARNGA------------GSGMRLEGDVDGRDAKEPPAGFVTSKELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRPDIKSAWVARAAVGLEGGISDEKLAQLLPFTVKFVLKQNPLTEVCSVELVP--DKWRAASSLVCQKLILALEWKDPARDY--FDVLAATFKHPSFL----------------------ELENNAQSVLS-----GLTLEQCLDAYTREETLEEEDS---WYCSSCQAHRRGVMK-IDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVT----GWGLEHP------------WLNYDDEFVEVKNKLSHKVASSVVQGYADEPCFVASHRSNILQRSCRQG*AWRTSHGVF*KGAIRAKVSVISPQSILQRQHRHLPW*CLIVFYHVTRSSSTFLASDRLSFMFFAPQEMAPDKIVSEAAYVLFYRRRRLTPSNV 6494
P GACGLVN+GNTCY+NSA+QC+ + PL+R+YLLS + ++NK NPLGT+G L+E+F LL+ +WS + P + ++ + K +P FAG +QQD+QE L+ +LDAL ED NRVI KPYV E+D S + +EAW R +R+RS+I D+ GQ C VCN S FDPF LS+PIP + I + ++ R T + + + + + ++P L+ QY + + RL + SDL+ + + GI AT+L++ E +L T+ +D+ + + E I + P + + Q + + ++P + L ES + Q+ P DG V DD + G+E+E D ++ P R + +P + +EL+LG R+DA+D + W+ +VV++ G +K VK+HFD F +KWDE Y + ++QPL++ + P + + V HR ++ R+P GQ + AR GA GS DVDG +E + + + L+ L+V+ Y+ G+ G MA+ I S V R +EKL +L PF V+ ++PL S E R + + + + L+W++P D + L + K+ ++L + A+ LS G+ L +CL + + + LE ++ W C C+ R G + + LW++PD+L IHMKRF S +WREKI T V FP +GLDM + S + VYDL GV+NH GGMTGGHY A C+++PCSKDG EEV G G P W + VEV +A++ Q + EP + ++ V+ P +AP +VSE+AYVLFYRRRRLTP+NV
Sbjct: 1266 PGYGACGLVNLGNTCYINSALQCIGYFPLVRSYLLSGDFRDDLNKDNPLGTKGVLLEEFVELLRFMWSAKAGEKSPFQLRKLIAKLRPDFAGADQQDAQELLSYVLDALMEDSNRVIKKPYVEGLEDDWV-KVTSLSRVGEEAWRRERRRSRSIITDVHTGQTISTTTCPVCNFASQKFDPFNLLSLPIPTVTDVIFKCKVIRRANSFNTPWILNRPKHRLGKAKIRFSPNKSMNSTSPSDNLIVEQYIIAMSRLADSSDLRXKIQSMCGISATNLIICSAEE---------KLATKEKDDGSVVRRITELTIINKKGPCSQFARQRNTNDESNTSATSPAL--------LVAFESTL----------------------QSRPL-DGR------------VDXGSETNYDDXXXXXXXXXXXXXXXXXXXXXXLEKMIMQYGNEEECRL--------------YDTETLPIAQAVSR--------SLWPTRHQELKLGLRVDAIDHKKHWYPGSVVEILENDPANGEVGQDETK-----------------VKIHFDNFSSKWDEIYSIEHFNNGQVQPLYSHATPRAKPTEFIVYHRYMDRSTRIP--NLFGQSFYVQCRSEWSTARAGAQILAQASRFLRQGSIQTGPVDVDGAQEREMKIDRLYDRTQSIISELID------------LLVEADKEYLMGALGLTDD-----TPMARRFRNPGFDASTISSTLVRRV---------NEKLHRL-PFEVRVCTAESPLAGNASEECAYPFSLMRTIGNYLSARHAVVLQWREPPSDKKAINSLPSNTKYSNYLNAPVMYVPPKEFMDEASAEILTKANQKAKKSLSARGSAGMPLGKCLTEFCKTQKLENDEGDTHWRCPRCKDFRPGAKQNLVLWQLPDILTIHMKRFRSSQKWREKITTKVNFPLTGLDMRKWCHQESPVLETTVTDDS-YVYDLIGVLNHYGGMTGGHYVATCKATPCSKDGREEVAFDFNGVGASMPIATEDEAGTPSGWKPFGRSKVEVNENKVSALATAKFQRESVEPLW------------------------------LQFDDEVVEP--------------------------------------------IAPKNVVSESAYVLFYRRRRLTPANV 2238
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: A0A1Z5KMG2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMG2_FISSO) HSP 1 Score: 309 bits (791), Expect = 1.030e-80 Identity = 327/1164 (28.09%), Postives = 484/1164 (41.58%), Query Frame = 3
Query: 3228 PIAGACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAA--EVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPRIRTR---YFVTQDGVDAEDGGKLCHGSAAEFSNPRQL---VPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQ------AKVLQDKELLTELRDNQVIALEMGESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSD---------GSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHRKTVRVPASGAHGQP--ANARN---GAGSGMRLEGDVDGRDAKEPPAGFVTSK--ELFGLPFLVRC--------PPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRPDIKSAWVARAAVGLEGGISDEKLA-----QLLPFTVKFVLKQNPLTEVCSV-----ELVPDKW-RAASSLVCQKLILALEWKDPARDYFDVLAATF---------------------KHPSFLELENNAQSV---LSGLTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNS-AHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVTGWGLEHPWLNYDDEFVEVKNKLSHKVASSVVQGYADEPCFVASHRSNILQRSCRQG*AWRTSHGVF*KGAIRAKVSVISPQSILQRQHRHLPW*CLIVFYHVTRSSS-TFLASDRLSFMFFAPQEMAPDKIVSEAAYVLFYRRRRLTPSNV 6494
P GACGL N+GNTCY+NSA+QC+S+ PL+RAYLLS+M+ A ++N+ NPLGT GK +E+ A L+K +W + P +FK L K+ PQF+G +QQD+QEFL MLD LHED NRV KPYV A +D + N+ + +E+W R ++RNRSV+ D+ GQ+ C CN S FDPF LS+PIP + I + R + + + ++ + + + L V QY + + RL + DL+ L +L GI + L + L E + VL + L L D + ++ + R N A+ +SV TP + ES + R T K ++ SG +N TA SD G + E DS P V E +P ++ +G R+DA D G WF+ +VV+V A +G++S D+ K V VHFD F +KWDE+Y +++E +Q L + + P + D+ V HR S G P A+ RN A +G ++ V R PP K + PF+ R R+ L ++++ +YV R+ G D ++ + + + LE +S+ +L LLPF ++ + +P+ + EL P R ++ V + ++ L W+ +D ++F K S + EN A+ G+ L CL + +E+ L D+W C C+ R G ++LW++PD L H+KRF+ SARWREKI T V FP +GLDMS + S A RN + +YDL GVVNH G MTGGHY A C+ S C KDG EEV GY+ V + +S+ L WR S P++ L + + LI V S+ T+L D + + PD + +E AYVLFYRRR L+ SN+
Sbjct: 1070 PGFGACGLTNLGNTCYMNSALQCISYMPLLRAYLLSNMFKATGDLNRDNPLGTGGKFLEESAELMKIMWCSRFGEKSPIRFKAHLGKFNPQFSGADQQDAQEFLNYMLDVLHEDSNRVRKKPYVEALSDDYVRQHQLNR-VGEESWRRFLRRNRSVVSDVAMGQVLNTVTCPACNYSSRNFDPFNLLSIPIPTIADVIFQCTFYRRATPATCPWVLNRSRRESSSSTRYSFRAGPRKGSGPPLETYVAEQYAITMSRLADSGDLRLQLQNLCGIASARLHLFRLEEVENDGFQPESVLSHRASLIPLNDKEGPCSQLMKKR----------GQNDASAASV-TP---------------IIAFESSL----------RPRQWTDKPEL--------------------------------------------SGDSTLNENTATANAAHSDHFLRCLDSYGDDAECRVY----------------DSDPLVLVK------EASRRMWPESAQDFTIGLRVDAKDQRGNWFSGSVVKVFDDATC--NEGNESC---------DEVVKDTRRVSVHFDNFSSKWDETYSIRDFQEGNIQSLFSHATPKTKPTDLLVYHRYDN---TSVYFGLPFYASCRNEWTNARAGAQILAQVS-RFLYYPPVDPEERKGPQTSADPFVERALHESRYYDKIQRTVSELIDILLEYDRKYV---------------RL-----GLGLTTDDTETVKLTKLTIPLEQLVSELELKVADYLALLPFEIR-ISSMDPVNADKTQGSPEEELFPFLLNRTIANFVTARSVVVLCWRPHNKDKLCTPKSSFARSVAYVLPPVQTHKTSAEILKKASLNDSENEAKKDHIDSGGVGLGSCLKEFCKEQKLSLSDNWRCPRCKDFREGKQDMNLWRLPDFLTFHIKRFNMSARWREKITTKVNFPLTGLDMSEWCHGTSPALRNLHPDSR---IYDLIGVVNHYGSMTGGHYIATCKVSNCGKDGREEV---------------------------------GYSFNGVGVINVQSDELDVPS----GWRLSR----------------PKAELNQNKQA----ALISAKAVAESAEPTWLQFDDE-----LVEPIPPDVVATEMAYVLFYRRRELSSSNI 2029
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: A0A1Z5KNS6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KNS6_FISSO) HSP 1 Score: 305 bits (782), Expect = 1.190e-79 Identity = 299/1074 (27.84%), Postives = 439/1074 (40.88%), Query Frame = 3
Query: 3183 GGGALNRRSSTPGKPPIAGACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAA--EVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPRIRTR---YFVTQDGVDAEDGGKLCHGSAAEFSN---PRQLVPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQ------AKVLQDKELLTELRDNQVIALEMGESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHRKTVRVPASG------AHGQPANARNGAG-----SGMRLEGDVDGRDAKEPPAGF--VTSKELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRPDIKSAWVARAAVGLEGGISDEKLAQLLPFTVKFVLKQNPLTE-----VCSVELVPDKW-RAASSLVCQKLILALEWKDPARDYFD------------VLAATFKHPSFLEL-----------ENNAQSVLSG-LTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNS-AHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEV--------------------TGWGLEHP-------------------------WLNYDDEFVE 6095
GGG + S PG GACGL N+GNTCY+NSA+QC+S+ PL+RAYLLS+M+ A ++N+ NPLGT GK +E+ A L+K +W + P +FK L K+ PQF+G +QQD+QEFL MLD LHED NRV KPYV A +D + N+ + +EAW R ++RNRSV+ D+ GQ+ C CN S FDPF LS+PIP + I + + R + + + + + + N V QY + + RL + DL+ L +L GI A L + L E + VL + L L D + ++ + R N A+ +SV + E+ + R T K + +DD K T P + ++ + D D RR +P + LG R+DA D G WF+ +V++V + T D+ K V VHFD F +KWDE+Y +++E +Q L + + P + D+ V HR G + NAR GA S VD + K P A V + L + + R+ L ++V+ +YV + + +A + + + + A LE ++D LLPF + + +PL E+ P R + V + ++ L W+ ++D VL H + E+ E ++ SG + L CL + +E+ L D+W C C+ R G ++LW++PD L+ H+KRF+ SARWREKI T V FP +GLDMS + S A +N+ + +YDL GVVNH G MTGGHY A C+ S C KDG EEV +GW L P WL +DDE VE
Sbjct: 1054 GGGETAKLCSLPG----FGACGLTNLGNTCYMNSALQCISYVPLLRAYLLSNMFKATGDLNRDNPLGTGGKFLEESAELMKIMWCSRFGEKSPIRFKSQLGKFNPQFSGADQQDAQEFLNYMLDVLHEDSNRVRKKPYVEALSDDYVRQHQLNR-VGEEAWRRFLRRNRSVVSDVAMGQVLNTVTCPACNYSSRNFDPFNLLSIPIPTVADVIFQCTLYRRATPATCPWVLNRSRRENSSHTRYSFKAGTTRGNGPPSETYVAEQYAITISRLADSGDLRLQLQNLCGIAAARLHLFRLEEFENDGFQPESVLSHRASLIPLNDKEGPCSQLMKKR----------GQNDASAASV----------------TQIIAYETSL----------RPRQLTDKPET------------------------------SDD-------------------KSSTENTAPGNATDSDHFLDCLESYGDDAECRVYDSDPLVLAKEVSRRM--------WPESAEDFILGLRVDAKDQRGNWFSGSVIKVFDDETA-----------NGGTDNGDETFKDTRKVSVHFDNFSSKWDETYSIRDFQEGNIQSLFSHATPKTKPTDLLVYHRYDDTSVYFGLPFYASCRSEWTNARAGAHILAQVSRFLYYPPVDPEERKGPQASADPVVERALNESRYYDKIQ--RTVSELIDILVEYDRKYV-------------RFGLGLSADEVKTVKLSKPPSTFEQLAGELEAKVTD--YLALLPFEFR-ISSMDPLNADKTQGAPEEEMFPFSLNRTIGNFVTARSVVVLCWRPFSKDRSSSQKSSIARSVAYVLPPIQTHKASAEILKKASMNDRSNETKKDNIDSGGVGLGSCLKEFCKEQKLSLSDNWRCPRCKDFREGKQDMNLWRLPDFLMFHIKRFNMSARWREKITTKVNFPLTGLDMSEWCHGTSPALQNRHPDSR---IYDLIGVVNHYGSMTGGHYIATCKVSNCGKDGKEEVGYSFNGVGVMNVQFDELDAPSGWRLSRPKAEVNHSKQAATVSAKAVAESAEPLWLQFDDELVE 1997
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: A0A6S8YWV0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8YWV0_9STRA) HSP 1 Score: 299 bits (765), Expect = 1.370e-77 Identity = 295/1142 (25.83%), Postives = 478/1142 (41.86%), Query Frame = 3
Query: 3228 PIAGACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWA--AEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPRIRTRYFVTQDGVDAEDGGKLCHGSAAEFSNPRQLVPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLH-------EHQAKVLQDKELLTELRDNQVIALEMGE-SRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQALPAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHRKTVRVPASGAHGQPANARNGAGSGMRLEGDVDGRDAKEPPAGFVTSKELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRPDIKSAWVARAAVGLEGGISDEKLA----------QLLPFTVKFVLKQNPLT-EVCSVELVPDKW------------RAASSLVCQKLILALEWKDPARDYFDVLAATFKHPSFLELENNAQSVLS----------------GLTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSS---NSAHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVTGWGLEHPWLNYDDEFVEVKNKLSHKVASSVVQGYADEPCFVASHRSNILQRSCRQG*AWRTSHGVF*K-GAIRAKVSVISPQSILQRQHRHLPW*CLIVFYHVTRSSSTFLASDRLSFMFFAPQEMAPDKIVSEAAYVLFYRRRRLTPSNV 6494
P GACGL N+GNTCY+NSA+QC+S+ P++R+YLLS + ++NK NPLGT GKL+E+ ASL S+WS ++ P+KF+ L + K Q++ +QQD+QE L +++D+LHED N+V+ KPYV E++ ++ + +E+W R ++RNRS+I ++ GQ+ C VCN S +FDPF LS+P P +E + + ++L R + Q ++ + ++ + ++ +Y + + RL ++S+LKQ L DL GI L + +L+ E DK++LT L D + LE S P V+P +PT ++ E ++R NG A AI + +A + S GE+ DG+E D D RR +P ++LG R+DA+D G WF ++++ + + D S VKVHFD F KWD +Y ++ + +QPL+T+ P + L+ V H ++G SG + PF ++C S ++ Q +R++ + D++ + A ++ D+ + + R V L + EKL + ++ +L + P+T +C D R + + K ++ +EWK A + + + + L+ + N+ G+ L+ LD + + LEE+D W C C+ R G + LW++PD+L H+KRF+CSARWREKI T + FP +GLDM + N++H VYDL GVVNH GGMTGGHY A C+ + CS +G EEV EH N++ V H ++ Q +W+ + G+I ++++ + ++ + S +L D S + + P + SE AYVLFYRRRR++PSN+
Sbjct: 1247 PGFGACGLGNLGNTCYMNSALQCMSYMPILRSYLLSYQFKKNGDMNKDNPLGTGGKLLEEMASLQTSMWSGKFGVRQPTKFRNQLGRAKQQYSAADQQDAQELLNDLIDSLHEDSNKVLKKPYVEGLEDNWVDRNELSR-VGEESWRRFLRRNRSIISNIGMGQVLNRVTCPVCNYTSRSFDPFNMLSLPFPSVSEVVFKCIVL-RSASPVNCPQTLNIKKESPRSWKVDSSSAPSATHIID-EYIITMSRLADVSELKQKLHDLCGICLRELSLFILNNEDNENEEESGSDESDKKILTALPDKEGPCLEYARRSTPGEFVSP----------HEIPT-----------------------TILAFESTLKKRPINGN------------------------------APAINISEMRNASKNKVRESVEGELAYY--------GDGNECRI----------------YDSDPFKLAIATSRR--------HWPETASVVDLGLRVDAIDQRGNWFPGSIIE------ITKDHADPGSTK----------------VKVHFDHFSTKWDLTYQFSDFAKGNIQPLYTQCHPKNKPLEFQVFH------------------KHGGASGFDKQ------------------------PFFIQCYTEWSVARAGAHILAQTARFLEQPMPRGLMRGDDLDKIYRDYRTAIAETIDLLLS-IDREFVNL---MLSEKLVPSKGSMALMHEKFNLRLEDLLARLPITVTICDTSQESDDASDGGQIFDFRFDRVIGNCIHPKRVVVIEWKSIALRRGEGVYSLYSELIPLQRQKNSNPAAKQNGLPAKKVRPKHANGGMRLDVLLDEFCDVQKLEEDDCWRCPKCKDVREGRQSMMLWRLPDLLTFHLKRFNCSARWREKITTKINFPLTGLDMQEWFDKDVPNASHEAY--------VYDLVGVVNHYGGMTGGHYVANCKVTACSPEGSEEV-----EH---NFNGAGV---------------------------HAFGTKEKEAMQTSSWKLGRSKEKENGSINSRLASSASKTAAES------------------SEPLWLQFDDDSV-----EPIPPRNVNSENAYVLFYRRRRISPSNI 2156
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Match: K0TET2_THAOC (USP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TET2_THAOC) HSP 1 Score: 274 bits (701), Expect = 1.250e-71 Identity = 297/1129 (26.31%), Postives = 444/1129 (39.33%), Query Frame = 3
Query: 3237 GACGLVNVGNTCYLNSAVQCLSHTPLMRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVPAPEEDEEGSGRSNQELADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKIVEVVMLPRIRTRYFVTQDGVDAEDGGKLCHGSAAEFSNP--RQLVPVQYGMMLPRLGELSDLKQALADLSGIPATSLVVAVLHEHQAKVLQDKELLTELRDNQVIALEMGESRPIRRVNPTTSASNQATVSSVPTPTLSAPTIPDPAATAALYEQESGVVVEGEQPARRRTANGTSKRQVEQAL----PAKDGNSSSIAVNDGGAAVVKAQAIQADDNGDAERAPTEGSGVGEVNIKMKTARETPSDGSEQEXXXXXXXXXXXXXXXTDLDDDSRPPTSVPDRRTPDERCTASFPAKLRELELGWRLDALDGEGAWFAATVVQVGPQARVVRRDGDKSSKTSPATRGDDQKHKTEYLVKVHFDGFIAKWDESYGEHEWREKKLQPLHTKSRPHGRTLDIPVVHRKTVRVPASGAHGQPANARNGAGSGMRLEGDVDGRDAKEPPAGFVTSKELFGLPFLVRCPPARSTRFLWRLVVQQASRYVAGSAGGRSSKAGSKDRMAKAAAGASSQRPDIKSA---------WVARAAVGLEGGISDE----------KLAQLLPFTVKFVLKQNPL----TEVCSVELVPDKWRAASSLVCQKLILALEWKDPARDYFDVLAATFKHPSFLELENNAQSVL--------------SGLTLEQCLDAYTREETLEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARWREKIRTLVVFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLYGVVNHMGGMTGGHYTACCRSSPCSKDGVEEVTGWGLEHPWLNYDDEFVEVKNKLSHKVASSVVQGYADEPCFVASHRSNILQRSCRQG*AWRTSHGVF*KGAIRAKVSVISPQSILQRQHRHLPW*CLIVFYHVTRSSSTFLASDRLSFMFFAPQEMAPDKIVSEAAYVLFYRRRRLTPSNV 6494
GACGL N+GNTCY+NS +QCLS+ PL+R+Y+LS G G + P KF+ L K + Q++G +QQD+QE + +M D LHED NRV KPYV A E DE + + +EAW R +RNRS + DL GQ+ + C C+ S FDPF LS+P P E I +++ R + + G+L S++ P ++L+ +Y + + RL ++ DLK L ++G+ A L + E + D LT++ ++V AL E ++ + A + TPT+ A + E+ + A VE++ P +DGN S+ AD+ D E ++ +TA + QE T+ PT + + + +P LG R+DA+D WF +V+++ V D P E VKVHFD F +KWDE Y + E ++ PL++ + + + V HR T NA++G K LFG F ++C ST ++ QASR++ S+ SK + R R IK+ +AAV + G SDE L LLPF ++ +PL + V + R + + + L L+WK + L P + + +L SGL + CL + +E+ L+ W C C+ R G + LW +PD+L HMKRF+ S+RWREKI T V FP +GL+M + + S + + VYDL GVVNH GGMTGGHY A C+++ CS +G E+ + L D EV EP +S G G + K S+ + S + W L F + + P +VSE AYVLFY+RRR+ PSN+
Sbjct: 185 GACGLDNLGNTCYMNSGLQCLSYLPLLRSYILS-------------GHTGN-------------------VHPKKFRNLLAKCRNQYSGADQQDAQELVNDMFDMLHEDGNRVTKKPYVEALE-DEFIAKTPLPRVGEEAWRRFQRRNRSAVSDLLMGQVYNQVTCPKCSHTSRNFDPFNMLSLPFPTMPEVIFRCIVVRRGTALNCLGTLKLSESQIGRLRTRSSSTSMMPPSKELIFEEYIVPMSRLADIGDLKMKLQHMTGVSAARLRMCKHEEIASTSTNDP--LTKIH-SKVTALPDKEGPCVKLLQ-------NAALDDTSTPTV-----------ARIMAFETTL-----------NARHIDVSSVEESTTVSPPQRDGNEST-----------------ADEMSDDEAT---------MSAPNRTALSKADERGVQEILKVYGDEKECFLYDTN-------PTLLAKVIS-----RSLWPESAEGFNLGLRVDAIDHRNRWFPGSVIEI-----VTEGKKDDDGVVGPK----------EVKVKVHFDNFASKWDEEYTLESFTEGRVCPLYSHASARSKPSEFVVHHRGT-------------NAKSG-------------------------EKYLFGQSFYIQCYNEWSTARAGAHILSQASRFIESSSPLDCSKHSDRSRR--------DARKVIKTLIRDLIDFDRQNVQAAVKMGGRQSDEISFALQEKVKALLPLLPFEIRVTAATDPLGISHSSVDEHRYPFNLVRTIGNYMTARQSLVLDWK--GNNLNQALERILYSPPPIVQHKQSHKLLKAHLKETGGNDPRRSGLNIGVCLTEFCKEQQLDGTGCWRCPVCKKDREGRQSMTLWNLPDILTFHMKRFNASSRWREKITTRVDFPLTGLNMREWCAKESPQYMDSN--EEDFVYDLVGVVNHYGGMTGGHYVATCKATKCSPNGNEDFA-YDFSGSGLAETDSLPEV------------------EP----------------------SSGGWAKIGRSKEKDSLSNGASKAVSESSEPLW---------------------LQFDDELVEPLPPRNVVSETAYVLFYKRRRMRPSNI 1083 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.258.45 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.258.45 >prot_P-littoralis_Contig8.258.45 ID=prot_P-littoralis_Contig8.258.45|Name=mRNA_P-littoralis_Contig8.258.45|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1998bp MGCCSSQPSQAPTGRGAFPAPLPPPMQDNMNELLNRWRHGEVNLLQRRFRback to top mRNA from alignment at P-littoralis_Contig8:1093464..1114499- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig8.258.45 ID=mRNA_P-littoralis_Contig8.258.45|Name=mRNA_P-littoralis_Contig8.258.45|organism=Pylaiella littoralis U1_48|type=mRNA|length=21036bp|location=Sequence derived from alignment at P-littoralis_Contig8:1093464..1114499- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig8:1093464..1114499- >mRNA_P-littoralis_Contig8.258.45 ID=mRNA_P-littoralis_Contig8.258.45|Name=mRNA_P-littoralis_Contig8.258.45|organism=Pylaiella littoralis U1_48|type=CDS|length=5994bp|location=Sequence derived from alignment at P-littoralis_Contig8:1093464..1114499- (Pylaiella littoralis U1_48)back to top |