mRNA_P-littoralis_Contig8.257.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig8.257.1
Unique NamemRNA_P-littoralis_Contig8.257.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: D7FKW8_ECTSI (SAS-6_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW8_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.220e-134
Identity = 200/210 (95.24%), Postives = 205/210 (97.62%), Query Frame = 3
Query:  117 MATELNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 746
            MATEL  CDFG+IEEMDPSIADGFR+IYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDD AP+SVRVELSSEADLF+HYTHS D+ASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRS EDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR
Sbjct:    1 MATELQTCDFGAIEEMDPSIADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDAAPQSVRVELSSEADLFFHYTHSIDDASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSAEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 210          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A835YXQ7_9STRA (SAS-6_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXQ7_9STRA)

HSP 1 Score: 323 bits (827), Expect = 9.890e-107
Identity = 157/204 (76.96%), Postives = 182/204 (89.22%), Query Frame = 3
Query:  129 LNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 740
            +   ++ SIE+MDPS+ADGFRI+YDREVPFELRVQ+ ADGPQ VGTLEAIKVKVL+LGD   P+ VRVELSSEADLF+HY H  DE +F  MQE+Q+L ++F DYP VLIRMLN CI+EPHSHL V+VMQH+++ARLDFIQNMEYKF+EL+SL +TRSPED+VQHQITYRYNAMKSRLALMQARLQ+VNNLVKLKNPSLLLQLQ
Sbjct:    1 MQTFEYTSIEDMDPSVADGFRIVYDREVPFELRVQDGADGPQHVGTLEAIKVKVLVLGDGALPQGVRVELSSEADLFFHYMHVVDEGAFAAMQEQQRLTLDFADYPAVLIRMLNQCIREPHSHLAVYVMQHELDARLDFIQNMEYKFIELLSLHFTRSPEDVVQHQITYRYNAMKSRLALMQARLQDVNNLVKLKNPSLLLQLQ 204          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A6V2Z9A0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Z9A0_HETAK)

HSP 1 Score: 322 bits (826), Expect = 2.360e-106
Identity = 161/204 (78.92%), Postives = 181/204 (88.73%), Query Frame = 3
Query:  129 LNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 740
            +   DF SIEEMDPSI DG RIIYDREVPFELRVQ+SADGPQQVGTLEAIKVK+L+LG+D AP SVRVE SSEADLF+HYTH  D   FQV+QE+Q+LMVEF DYPNVLIRMLN CI+EPH+HL VFVMQ DV ARLDFIQNMEYKFVELM+  + RS E++VQ+QITYRYNAMKS+LALMQ+R+QEVNNLVK+KNPSLLLQLQ
Sbjct:   27 MQTLDFTSIEEMDPSIEDGHRIIYDREVPFELRVQDSADGPQQVGTLEAIKVKILILGEDAAPSSVRVECSSEADLFFHYTHQLDSQGFQVVQEQQRLMVEFPDYPNVLIRMLNACIQEPHAHLAVFVMQRDVAARLDFIQNMEYKFVELMTCHFARSTEEVVQYQITYRYNAMKSKLALMQSRMQEVNNLVKMKNPSLLLQLQ 230          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A7S1XUL9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUL9_9STRA)

HSP 1 Score: 316 bits (809), Expect = 9.130e-104
Identity = 157/207 (75.85%), Postives = 176/207 (85.02%), Query Frame = 3
Query:  120 ATELNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 740
            A +L   D  +IEEMDPS A+GF +IYDREVPFELRVQ++ DGP QVGTLEAIKVK+L+ GDD  P +VR+ELSSEADLFYHY H  DEA FQV+QE+QKLMVEF DYPNVLIRMLNNCI+EPH+HL VFVMQ D  ARLDFIQNMEYKFVELMS  + RS E+ VQH ITYRYNAMK+RLALMQARL EV N++KLKNPSLLLQLQ
Sbjct:    9 AADLQTFDMSAIEEMDPSCAEGFNVIYDREVPFELRVQQNQDGPSQVGTLEAIKVKILLQGDDARPSAVRIELSSEADLFYHYAHLIDEAGFQVVQEQQKLMVEFADYPNVLIRMLNNCIREPHNHLAVFVMQQDGTARLDFIQNMEYKFVELMSCHFARSSEESVQHHITYRYNAMKTRLALMQARLTEVQNVIKLKNPSLLLQLQ 215          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A7S2UUP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUP1_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.070e-100
Identity = 154/216 (71.30%), Postives = 179/216 (82.87%), Query Frame = 3
Query:   93 GLPINRQIMATELNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 740
            G+  + + +   +   DF +IEEMDPS+ DG R+IYDREVPFE+R+Q+SA+ PQQVGTLEAIKVKVL+LGDD  P SVR+ELSSEADLF+HY H  D   F+ +Q++Q+LMVEF DYPNVLIRMLNNCIKEPHS L VFVMQ DV+ARLDFIQNMEYKFVELM+  +  SPED VQ  ITYRY +MKSRLALMQ RLQEVNNLVK+KNPSLLLQLQ
Sbjct:   12 GVKSSDENLGDLMQTLDFSAIEEMDPSVVDGHRVIYDREVPFEVRLQDSAEAPQQVGTLEAIKVKVLLLGDDANPESVRIELSSEADLFFHYYHQLDLTGFKTVQDQQRLMVEFPDYPNVLIRMLNNCIKEPHSCLAVFVMQQDVHARLDFIQNMEYKFVELMTCHFVHSPEDSVQRHITYRYKSMKSRLALMQNRLQEVNNLVKMKNPSLLLQLQ 227          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A7S0F8G2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0F8G2_9DINO)

HSP 1 Score: 288 bits (737), Expect = 1.160e-92
Identity = 140/210 (66.67%), Postives = 177/210 (84.29%), Query Frame = 3
Query:  111 QIMATELNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 740
            Q  A+ L+A DF +IEEMDPS+A+G R++YDREVPFELRVQ++  GPQ+VGTLEA+K K+L LG++  P+  R+EL+SE DLF+HYTH  DE  F+ MQE QKLM++FQ+Y  VLI+MLNNCIKEPHS+L VF+MQ D +ARLDFIQNMEYKFVEL+S  +  S E++V+ QIT+RYN++KSRLALMQARLQ++N LVK+KNPSLLLQLQ
Sbjct:   32 QSNASSLDAFDFTAIEEMDPSLAEGHRVVYDREVPFELRVQDADTGPQEVGTLEAVKCKILALGEEQTPQHCRIELTSENDLFFHYTHGVDEHGFRSMQEHQKLMIDFQEYSAVLIKMLNNCIKEPHSYLAVFIMQRDGHARLDFIQNMEYKFVELLSCDFIASSEEVVRQQITFRYNSVKSRLALMQARLQDINALVKVKNPSLLLQLQ 241          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A7S3JM65_9SPIT (Hypothetical protein n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JM65_9SPIT)

HSP 1 Score: 286 bits (731), Expect = 5.450e-92
Identity = 135/209 (64.59%), Postives = 181/209 (86.60%), Query Frame = 3
Query:  120 ATELNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQSR 746
            A+ LNA DF +I+EMDPS+A+G ++ Y+REVPFELR+QES  GPQ+VGTLEAIKVK+L+LGD+    +++VEL+SE D+F+HYTHS  E SF+++QE+QKLM+EF DY N+LI+MLN+CIKEPHS L VF+MQ D +ARLDFIQNMEYKFVEL+S+ +  S E++++ QIT+RYN++KS+LA+MQARLQ++N +VK+KNPSLLLQLQ +
Sbjct:    9 ASLLNAFDFRAIDEMDPSLAEGHKLYYEREVPFELRIQESEGGPQEVGTLEAIKVKILVLGDEGNIENIKVELTSENDMFFHYTHSLTEDSFKIVQEDQKLMIEFNDYSNILIKMLNSCIKEPHSFLAVFIMQRDGSARLDFIQNMEYKFVELLSMDFNASSEEVIRQQITFRYNSVKSKLAIMQARLQDINAIVKIKNPSLLLQLQKQ 217          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A7S3KUF3_EUPCR (Hypothetical protein n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KUF3_EUPCR)

HSP 1 Score: 284 bits (727), Expect = 1.790e-91
Identity = 135/204 (66.18%), Postives = 175/204 (85.78%), Query Frame = 3
Query:  129 LNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 740
            LNA DF +I+EMDPS+++G RI+Y+REVPFELR+Q+   GPQ+VGTLEAIKVK+L+LG+D  P  ++VELSSE D+F+HYTH+ +E SF  +QE QKLMV++ DYPN+LI+MLN+CIKEPHS L VF+MQ D +ARLDFIQNMEYKFVEL+S  +  S E+ ++ QIT+RYNA+KS+LA+MQARLQ++N +VK+KNPSLLLQLQ
Sbjct:   11 LNAFDFQAIDEMDPSLSEGHRIVYEREVPFELRIQDGDTGPQEVGTLEAIKVKILVLGEDGNPEQIKVELSSENDMFFHYTHNIEELSFSKVQESQKLMVDYPDYPNILIKMLNSCIKEPHSFLAVFIMQRDGSARLDFIQNMEYKFVELLSCDFDASTEETIRQQITFRYNAVKSKLAIMQARLQDINAIVKVKNPSLLLQLQ 214          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A8J1ZE14_9DINO (Hypothetical protein n=2 Tax=unclassified Amoebophrya TaxID=2558461 RepID=A0A8J1ZE14_9DINO)

HSP 1 Score: 282 bits (721), Expect = 1.390e-90
Identity = 136/204 (66.67%), Postives = 173/204 (84.80%), Query Frame = 3
Query:  129 LNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 740
            L++ DF +IEEMDPS+ +G R+ YDRE PFELRVQ++  GPQ+VGTLEAIK K+L+LGD+  P  +R+EL+SE DLF+HYTHS DE  F+ MQE QKLM++F DY +V+I+MLNNCIKEPHS L VFVMQ D +ARLDFIQNMEYKFVEL+S  +  SPE++V+ QI++RYN++K++L+LMQARLQ+VN LVK+KNPSLLLQLQ
Sbjct:   13 LDSFDFTAIEEMDPSLTEGHRVTYDRECPFELRVQDADTGPQEVGTLEAIKCKILLLGDEQQPNHIRIELTSENDLFFHYTHSVDEQGFRQMQESQKLMIDFPDYCSVVIKMLNNCIKEPHSFLAVFVMQRDGHARLDFIQNMEYKFVELLSCDFVASPEEVVRQQISFRYNSVKTKLSLMQARLQDVNALVKVKNPSLLLQLQ 216          
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Match: A0A7S3PI88_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PI88_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.600e-89
Identity = 134/205 (65.37%), Postives = 172/205 (83.90%), Query Frame = 3
Query:  123 TELNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQL 737
            + L   DF +IEE+DPS++DG+RIIYDRE P ELR QE+A+ PQ+VGTLEAIKVK+L+ G D++P SV++ELSSE DLF+H+TH  DE  F++MQ++QKLM++F +YP VLIRMLNNCIKEPHSHL VFV+Q   ++RLDFI+NMEYKFVEL++  + RS + +V+  I YRYNA+KSRLALMQARL +VN LVK+KNPSLLLQ+
Sbjct:   33 SSLTNIDFSAIEELDPSLSDGYRIIYDRECPVELRFQETAESPQEVGTLEAIKVKMLVTGKDSSPESVKIELSSECDLFFHFTHVVDEVGFRIMQQQQKLMIDFVEYPKVLIRMLNNCIKEPHSHLAVFVIQRSGHSRLDFIKNMEYKFVELLTCNFVRSSDALVKQHIAYRYNAVKSRLALMQARLSDVNALVKIKNPSLLLQI 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW8_ECTSI1.220e-13495.24SAS-6_N domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YXQ7_9STRA9.890e-10776.96SAS-6_N domain-containing protein n=1 Tax=Tribonem... [more]
A0A6V2Z9A0_HETAK2.360e-10678.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XUL9_9STRA9.130e-10475.85Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UUP1_9STRA1.070e-10071.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0F8G2_9DINO1.160e-9266.67Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A7S3JM65_9SPIT5.450e-9264.59Hypothetical protein n=1 Tax=Euplotes harpa TaxID=... [more]
A0A7S3KUF3_EUPCR1.790e-9166.18Hypothetical protein n=1 Tax=Euplotes crassus TaxI... [more]
A0A8J1ZE14_9DINO1.390e-9066.67Hypothetical protein n=2 Tax=unclassified Amoeboph... [more]
A0A7S3PI88_9STRA1.600e-8965.37Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:1089056..1093355 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKW8
PFAMsSAS-6_N
Model size1245
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.44e-137
EggNOG OGs299C8@1|root,2RGE2@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_001650.1
DescriptionCentriolar protein SAS N-terminal
Cds size633
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.257.1prot_P-littoralis_Contig8.257.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig8 1089172..1092859 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791643.3225846-UTR-P-littoralis_Contig8:1089055..10891711680791643.3225846-UTR-P-littoralis_Contig8:1089055..1089171Pylaiella littoralis U1_48UTRP-littoralis_Contig8 1089056..1089171 +
1680791643.4084542-UTR-P-littoralis_Contig8:1092859..10933551680791643.4084542-UTR-P-littoralis_Contig8:1092859..1093355Pylaiella littoralis U1_48UTRP-littoralis_Contig8 1092860..1093355 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791643.3336904-CDS-P-littoralis_Contig8:1089171..10892321680791643.3336904-CDS-P-littoralis_Contig8:1089171..1089232Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1089172..1089232 +
1680791643.3431525-CDS-P-littoralis_Contig8:1090667..10907891680791643.3431525-CDS-P-littoralis_Contig8:1090667..1090789Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1090668..1090789 +
1680791643.3612556-CDS-P-littoralis_Contig8:1091247..10913461680791643.3612556-CDS-P-littoralis_Contig8:1091247..1091346Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1091248..1091346 +
1680791643.373979-CDS-P-littoralis_Contig8:1091837..10919901680791643.373979-CDS-P-littoralis_Contig8:1091837..1091990Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1091838..1091990 +
1680791643.3895972-CDS-P-littoralis_Contig8:1092225..10923271680791643.3895972-CDS-P-littoralis_Contig8:1092225..1092327Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1092226..1092327 +
1680791643.3990703-CDS-P-littoralis_Contig8:1092763..10928591680791643.3990703-CDS-P-littoralis_Contig8:1092763..1092859Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1092764..1092859 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig8.257.1

>prot_P-littoralis_Contig8.257.1 ID=prot_P-littoralis_Contig8.257.1|Name=mRNA_P-littoralis_Contig8.257.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp
MATELNACDFGSIEEMDPSIADGFRIIYDREVPFELRVQESADGPQQVGT
LEAIKVKVLMLGDDTAPRSVRVELSSEADLFYHYTHSTDEASFQVMQEEQ
KLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYK
FVELMSLQYTRSPEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKN
PSLLLQLQSR*
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mRNA from alignment at P-littoralis_Contig8:1089056..1093355+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig8.257.1 ID=mRNA_P-littoralis_Contig8.257.1|Name=mRNA_P-littoralis_Contig8.257.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4300bp|location=Sequence derived from alignment at P-littoralis_Contig8:1089056..1093355+ (Pylaiella littoralis U1_48)
CTCCGACCTGCGTTGCGGGCTGTGACCAAAAAGTGAAGAGCAGGGCAGCG GGTGTTGTCGACCCGTCGATAAATCGTAGCAGAGATTGGAAAGGCTTACC GATCAACCGGCAAATCATGGCGACAGAACTGAACGCTTGCGACTTCGGGT CCATCGAAGAGATGGATCCATCTATCGGTGAGTTACGGAGGTTCGACGTG TGTGTCGACACGAGAGCGAGCCAGGCAATCAAAAATACCAGGCATAGTCT AGACGAGTGTGTGCTATGTGTTCTTGAAAATAAACGTTTGGTAACTGCCG AGGAGCATCTCCGTAGTGAGTTGTATACAGCAGCAGTGTGGTAGAAGGTC AGATGACTTGTTATCGTCTCATGATGGCGTGATTCGTAATTTTTTCTTCT CAAACAAACCCTCCTAGATACCAGTAGGTACGATGTGTCGTACGTAAAAA AGCTACGTCTACGACGCGTGCATGTGTACGATATACGTACGTCCCTCGCG CAAATAAATACTACCAGGGTACTCCGTATTTCGTTTCATGTGAGATACCT TGTACCTGGTACATTTTTTGAAAATTTCATGAGAATTTGACCTTTTTACC CCCCTGTGAAAAGTCATTGAACAATTTTTTTTAACAAAAGCTCTATAAAA GCAAAAAAAATGGCGACGCGTTCTCTTGTTTATAGAATGCGTTTGAGAAT TGAGCGGTTAGCGAGGTAAAAGTTTAGCTATCGGGAGTCACGTGATATTC CAAGTGACCAATAGCAAAATGGCGACCCAAAATGGCGACATTTGGCTACC TAGGGGTAAGAGGGTTAAGGACGAAGTGATGTATCGTACTTCGAACTTCG TACTTCGTACTTCGGAGTACTTCAAGTATATATTTATAATATCTGGTTCC TACTTTGCATATTTTTATCAGGTACCCTCGTCTTTACACTTCGAACTATC AATGATATTTGTGTTCGTTCGGGTGCTGCGGCAGGGTGTAATAACTGTAC GTAGCTCAAACCGTGGCGCCTTTACAACCCCATCTCTCTCTCCTTTGCAG GGAAAAAAGCACGCCCACTTTCGTGTTATTATTATTTTTGTCCTCCATCA AAGAAAAAACATTAACAACATTGACAACGCCCCCGTCCACCAAACTGTAC ATAAACCGTTTCAACTTCGATCAACTTCGAAATCGAAGTAGTATGTGCGT GTGCGCTTGCATCCCGTGTATTCTGGGCACCAGCCTACACCTCCCAATGT GAAAAGCACTGGAAAAAAATTGAAAATCTCAAAATCCTCTTGCTTCGCAA CTTTTTCCAGCGCTCCAATCGCCCAATCCAGGTAAACAAGATGTTGAAAA TATATGTAGGTGAACAAGTATTATGAAGAAGTGGGTGCGCCAGCCGGGGG GTCACACCATCGAACGAAATAACACACAATGGAGAAGAATGCTCCTGTAC TTGTAGAGAAGGAGCGGGAAATATCATGGGTGTGCTTTGAAATGAGCTCG TTCGTTGGGCGAAAGCCGACTTTGCTTGCATACATTCCTGACTGACTCTG GTTTATTCAATATTTGGCATCTGTCCTCTTTTACTCGTCTGTCTCGGCTC ACGATGTCTTAGCGGACGGATTCCGCATTATTTACGATCGGGAAGTACCA TTTGAGTTGAGGGTTCAAGAATCAGCTGACGGGCCGCAGCAGGTCGGAAC TCTGGAGGCGATCAAGGTCAAAGTGCTTATGCTGGTGAGCCCCACTGAGT TCATTGTGACAGTAATTACTTCGAAGTATTTCGACAGGTAGGTATGAGAG AGGTGGTGTGCCTGCGGGACATGTTGGCTGCTCAGCTTATTTCATCGTGT TGTGAACATGAAAAATTGAAAGGAATCATTGTTGCGTGTTGTTTCTAGAC GCGGGGAGGTCAACACGAACTTTGAAATTGTACTGTTTTAATTCCCTCTT GGGGAGAAAACCCTCCCGTTTTCCAACACTCTGGACACGCCCATGAATTT TCGGACAGGAAGACAAACTCTTCGGACAAACAATCGTAGACGTTTAATAG CATACTTGCATGCTACGCAGTGCGTAGGGCGGCACCGACGGACGTGTCAA CATGACGTCAATGTTGTCAGCAGTGCTGATGATAACTCCGGACCCGCTTA TTAAAGCTAAGTGTAACCCACGCGCGTTTTTTTGTGCCTCAGGGAGACGA TACGGCGCCTCGATCTGTCAGGGTGGAGCTCTCTAGCGAAGCGGATCTTT TTTACCATTACACACACAGTACCGACGAAGCTTCGTTCCAGGTGGGCAAC ACAACATGTGAAACCAACCGTCGATATACTAGATATGAGTTGTAGACGAC ATTCCTTTCCACTCCTTTGCATCTATATTCCGGGGCGTGCTGTCTGATGC ATCTGGTCCCCGAAACGACTTGGTTCGATGTAATCCTCATATGACGGGAG TAGTAGTAAATTCAATGCGTTATACGACATGCTTCTTGTACACTTTCAAG AAACATACTTGAGACAAACTCTTCGTACTGGGACACTAAGGGGGCGCGAA ATGGAGGTCTTACAATAATACGGCAGTACAGACCATGTGACGGAACGTTT TCCCTGTCGGCACGATGCCACATTTGTTCGTGGATATCGCGTGCTTCAAT GTGCATAACCCACTGGTACGGCTGAGGCCGCCATACTCTACCTGTGACTC CACTTGGTCAACTGATAAGGTCATCCTCTGAACATGTTACACAATGCTGA TCACATGCTTCCTAACATTCCACAAATTACAGGTAATGCAAGAGGAACAA AAACTGATGGTGGAATTCCAGGACTACCCGAATGTTCTGATCCGGATGTT GAACAACTGCATCAAGGAGCCCCACTCACATCTCGTTGTTTTCGTCATGC AACATGATGTTAACGCTCGCCTGGATTTCATACAGGTTTGTTCGTCTCCC GAACAATGTGCAACCAATAGCCTCCTACTGTAGACAAGCACTACAGCACT GCATCATGCAGTTGTTCCGTACGGAGTAGCAGTCTTTAAACTCTCGGTTC ACGTGCAAGCACATGCCTATCGAAATGCTCGCCCGACAGCGTCCGCCTCT CTGGGGCGAATTTCTGTCGGCATTTCCCTCTCTGAGCTCTCGTGCCAACG TGTGTTCCCCTGCGACGCAGAACATGGAGTACAAGTTTGTGGAGCTCATG TCCCTCCAATACACGCGGTCTCCTGAAGATATTGTCCAGCACCAGATCAC GTACCGGTACAACGCCATGAAAGTGAGTCAAAAATAAGTGAGCAGTAAAT CGGTACACGTGACGATTTACAAGCGATAGGCAGAGTGAAGACTCTTGCAA CCGTACCACGTGGTGCTTGAAATTCGACCCCGACGTAAACAAGTGACCAA GCATGTGCTAAATGCTGCGCAAGTCAACAGAGGGGTACGTTTTGGCAGTA GATGAGATACCAGTTCGGCAAGTATTTTCAAGGTCATTTGTTCTCCTACT TTCGGTCTCGGTAGCCCGTTAGGGGTAGGTATTGTTCGGCGTTTACTTGG TGAGTCAACAAAATGATTCTATGACCAGATCCTCGTCACTTCTCACACCG ACCCAACCCACCCACCTACCCCCCAAAACTGTTGAATGCCTCGCGCATTT CGTCGCGTTCGCCTTCTCGTTGGGCCGTTTGTCCTGGTCTTTCCTGCCGC TGCTCTAGTCGAGACTGGCACTGATGCAGGCCCGCCTCCAAGAGGTGAAC AACCTCGTCAAGTTGAAGAACCCGTCCCTTCTCCTGCAGCTCCAGTCTCG GTGACGATGGCGCTGCCATCTAGGTTGGATGAATGCGATAGACGCCCTGG CATTACTGTGCAGAGACAACTTGGCTCGTCGCTATAATATGGGTCCCTCA CACGGCTAGACGCATGGAAATGTCGTCGTGGACTGGCTTGGGCGTTGAAA TTGTTGATCGCGTGTGTCATGACAAGTGCAGGGACCTTGTCGACGGCGGT TTTCACACCACCACCAAAGGGTTACTGTACCGGTATATCAGGATAAAATG AGCCTACAGCCTCATTCTCTGACACGATCGTGCCCAAAATTTGTTCTGTA GCTACAAGAGGGCTGCCAATTTTAAGTACAAAATAGTCAAAGGACAGGAT CAAGCCATCAGTGGTCTGGCAGTCCGGCTGCTTCAACAGTGTTGTATTTG TAGGCAGGTGAGGCTTGGAGCCGTGGCGTGTTCCACTTCCGTCTCCATCG TATGGTGAAGTGCCATGTATTCCTTGCTGCTGAATTATCACTTGAACACC
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Coding sequence (CDS) from alignment at P-littoralis_Contig8:1089056..1093355+

>mRNA_P-littoralis_Contig8.257.1 ID=mRNA_P-littoralis_Contig8.257.1|Name=mRNA_P-littoralis_Contig8.257.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig8:1089056..1093355+ (Pylaiella littoralis U1_48)
ATGGCGACAGAACTGAACGCTTGCGACTTCGGGTCCATCGAAGAGATGGA
TCCATCTATCGCGGACGGATTCCGCATTATTTACGATCGGGAAGTACCAT
TTGAGTTGAGGGTTCAAGAATCAGCTGACGGGCCGCAGCAGGTCGGAACT
CTGGAGGCGATCAAGGTCAAAGTGCTTATGCTGGGAGACGATACGGCGCC
TCGATCTGTCAGGGTGGAGCTCTCTAGCGAAGCGGATCTTTTTTACCATT
ACACACACAGTACCGACGAAGCTTCGTTCCAGGTAATGCAAGAGGAACAA
AAACTGATGGTGGAATTCCAGGACTACCCGAATGTTCTGATCCGGATGTT
GAACAACTGCATCAAGGAGCCCCACTCACATCTCGTTGTTTTCGTCATGC
AACATGATGTTAACGCTCGCCTGGATTTCATACAGAACATGGAGTACAAG
TTTGTGGAGCTCATGTCCCTCCAATACACGCGGTCTCCTGAAGATATTGT
CCAGCACCAGATCACGTACCGGTACAACGCCATGAAATCGAGACTGGCAC
TGATGCAGGCCCGCCTCCAAGAGGTGAACAACCTCGTCAAGTTGAAGAAC
CCGTCCCTTCTCCTGCAGCTCCAGTCTCGGTGA
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