prot_P-littoralis_Contig8.253.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.253.1
Unique Nameprot_P-littoralis_Contig8.253.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length248
Homology
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Match: A0A6H5KBH7_9PHAE (PsbP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH7_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.350e-87
Identity = 139/193 (72.02%), Postives = 162/193 (83.94%), Query Frame = 0
Query:   53 TQSLAPSSATTPTTVVNSVLSAYGMPMISNEGKFTSSYVKLDDGEQSTICAFAYPANWVETKRG-GFITAANYQTGDGLVFNVGTAGKAKAIGDLSTLDIVADATPSEGVAKILREVPVTKGGVNYTYVTVKYNTVTRSGYDVERISYIAATVRQRRLYTLVATVSSERRNKMDLELNAIRASFRVGDAGMIK 244
            TQ  +PS+ATTPTTVVNSVLSAYG+PMI+ +G FTSSYVK++D  Q T+CA+AYP  WVE K+  GF TAANYQTGD L  N+G   KAK IGD+S L I A+ATPSEG AK+L+E  VTKGGVNYTY+TVKYNTVTRSGYDVER+SYIAATV+QR+L TLVATVS ERRNKMDL L AI+ASFRVGD G+++
Sbjct:   61 TQGPSPSAATTPTTVVNSVLSAYGIPMIAEDGGFTSSYVKVEDNGQETVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGAPSKAKTIGDVSALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERVSYIAATVKQRKLLTLVATVSGERRNKMDLILKAIQASFRVGDVGVVE 253          
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Match: D7FKW7_ECTSI (PsbP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW7_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 7.540e-77
Identity = 121/167 (72.46%), Postives = 141/167 (84.43%), Query Frame = 0
Query:   79 MISNEGKFTSSYVKLDDGEQSTICAFAYPANWVETKRG-GFITAANYQTGDGLVFNVGTAGKAKAIGDLSTLDIVADATPSEGVAKILREVPVTKGGVNYTYVTVKYNTVTRSGYDVERISYIAATVRQRRLYTLVATVSSERRNKMDLELNAIRASFRVGDAGMIK 244
            MI+ +G FTSSYVK++D  Q T+CA+AYP  WVE K+  GF TAANYQTGD L  N+GT  KAK IGD+  L I A+ATPSEG AK+L+E  VTKGGVNYTY+TVKYNTVTRSGYDVERISYIAATV+QR+L+TLVATVSSERRNKMDL LNAI+ASFRVGD G+++
Sbjct:    1 MIAEDGDFTSSYVKVEDNGQGTVCAYAYPVGWVEKKKADGFATAANYQTGDSLSLNMGTPSKAKTIGDVGALAIAAEATPSEGAAKVLQEKAVTKGGVNYTYLTVKYNTVTRSGYDVERISYIAATVKQRKLFTLVATVSSERRNKMDLILNAIQASFRVGDVGVVE 167          
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Match: A0A7S2UUM0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUM0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.820e-20
Identity = 62/187 (33.16%), Postives = 100/187 (53.48%), Query Frame = 0
Query:   61 ATTPTTVVNSVLSAYGMPMISNEGKFTSSYVKLDD--GEQSTICAFAYPANWVETKRGGFITAANYQTGDGLVFNVGTAGK--AKAIGDLSTLDIV-----ADATPSEGVAKILREVPVTK-GGVNYTYVTVKYNTVTRSGYDVERISYIAATVRQRRLYTLVATVSSERRNKMDLELNAIRASFRV 237
            AT   +VVNSVL AYG+P + +E  F + + +     G    I +FAYP  WVET +G  + A+NYQTGD +V      G+   +++ D+   ++       DAT +    K++++  +       Y  VT+K+NT+T SGYDVE+    + T+ +  L+ L A+  + R+ KM+  +     SFR 
Sbjct:    8 ATDSMSVVNSVLGAYGVPYMDSEIGFAALFEETTAPYGGAKAIISFAYPKTWVETTKGRTLGASNYQTGDRVVLVTKAKGQYDGRSVMDIPVQELAEVITPGDATQAASAYKVMKDEQLASMKSQEYRLVTLKFNTITSSGYDVEQYLVASCTLSKGNLFCLAASCPTARKKKMEESITKTALSFRA 194          
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Match: A0A8J9WM49_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WM49_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 7.610e-11
Identity = 72/230 (31.30%), Postives = 110/230 (47.83%), Query Frame = 0
Query:   34 QIMFEAVLQQLSSRSRLLLTQSLAP-----SSATTPTTVVNSVLSAYGMPMISNEGKFTSSYVKL-DDGEQSTICAFAYPANWV----ETKRGGFITAANYQTGDGLVFNVGTAGKAKAIGDLSTLDIVADA-----TPSE---GVAKIL----REVPVTK---GGVNYTYVTVKYNTVTRSGYDVERISYIAATVRQRRLYTLVATVSSERRNKMDLE-LNAIRASFRV 237
            Q+       +L  R  LLL+ +L       S    PTTV+NSVL AYG+P +   G F     KL DD +Q  I  F YP +WV      ++G +++  ++ T D  V  V          + S+ D+V +      +P +   G A+++    R +        G+ YTY+     TVTRSGY + R ++  A  +   +Y+LVA+  S++ NK   E L  + ASFRV
Sbjct:    9 QVCISCSSVELGRRQHLLLSVNLGVLGSQLSGTDDPTTVLNSVLGAYGLPQLPGSGGF-----KLYDDFDQEYI--FEYPRSWVGRSNSLRQGVYVS--DFNTADKAVVEV--------FPEPSSADLVLEVVRRAVSPGQEIGGDARLILPDERRIKTETRDIDGMRYTYIRFPSETVTRSGYQIRRKNFAVAAAKGGTVYSLVASARSDQYNKAKEEVLQRVVASFRV 221          
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Match: A0A2V0NNW9_9CHLO (Photosystem II oxygen evolving complex n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NNW9_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 2.200e-9
Identity = 59/192 (30.73%), Postives = 98/192 (51.04%), Query Frame = 0
Query:   65 TTVVNSVLSAYGMPMISNEGKFTSSYVKLDDGEQSTICAFAYPANWV----ETKRGGFITAANYQTGDGLVF---------NVGTAGKAKAI----GDLSTLDIVADATPSEGVAKILREVPVTKGGVNYTYVTVKYNTVTRSGYDVERISYIAATVRQRRLYTLVATVSSERRNKMDLEL--NAIRASFRV 237
            TT+VNSVL AYG+P +    K ++ Y   DD   S   +F YP  WV      +RG  +  +++QT D +           ++  A  A A+    G L+  D++    P++G  ++  E   T  G  Y Y+     T+TRSGY + R ++ AA +R+ +L+ + A+V  ++ N+   EL  + +R SFR+
Sbjct:   85 TTIVNSVLGAYGLPTL----KASAGYKVWDDF--SDEWSFEYPRGWVARRNSLRRG--VVISDFQTADKVAVEELDPPPDGDLAAAAVAAAVLPGGGRLTQDDVLG--LPAKGAVRVAAE---TVDGQEYLYLEFPSETITRSGYQIRRRNFAAAALRRGKLFVIAASVRGDQYNEAKRELLEHTVR-SFRL 262          
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Match: A0A5J4YSH8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSH8_PORPP)

HSP 1 Score: 62.8 bits (151), Expect = 5.280e-8
Identity = 56/189 (29.63%), Postives = 86/189 (45.50%), Query Frame = 0
Query:   66 TVVNSVLSAYGMPMISNEGKFTSSYVKLDDGEQSTICAFAYPANWVETKRGGFITAA-----------NYQTGDGLVFNVGTAG------KAKAIGDLSTLDIVADATPSEGVAKILREVPVTKGGVNYTYVTVKYNTVTRSGYDVERISYIAATVRQRRLYTLVATVSSERRNKMDLELNAIRASFRV 237
            TVVN+ LS YG+P+    G +T+   + DDG       F YP +WV ++ G  ++AA           NY+T D     VG          A ++ +L+ L +  DAT       ++R+   +    +      K+N+ TRSGYDVER +  +ATV +  +  L  +  S R       L  I  SF+ 
Sbjct:   84 TVVNAALSGYGIPVQDVAG-YTTFVHQWDDG---LFVKFQYPKSWVVSRVGSSLSAAPGKAVSPVSMSNYRTADQCALYVGPPQPKYRDISAVSVEELTALVLPGDATRDYSEYTLIRQA-ASAANASCKQYEFKFNSTTRSGYDVERYNVTSATVLKTCVVALSCSCVSNRIKSQAPALKLIADSFQA 267          
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Match: A0A383W3H0_TETOB (PsbP domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W3H0_TETOB)

HSP 1 Score: 59.3 bits (142), Expect = 1.100e-6
Identity = 63/210 (30.00%), Postives = 101/210 (48.10%), Query Frame = 0
Query:   47 RSRLLLTQSLAPS------SATTPTTVVNSVLSAYGMPMISNEGKFTSSYVKLDDGEQSTICAFAYPANWVETK---RGGFITAANYQTGDGLVF---------NVGTAGKAKAIGDLSTLDIVADATPSEGVAKILREVPVTKGGVNYTYVTVKYNTVTRSGYDVERISYIAATVRQRRLYTLVATVSSERRNKMDLEL-NAIRASFRV 237
            R +LLL  +LAP        +   TT+VNSVLSAYG+P +    K ++ +   D+ E      F YP  WV  +   R G +  +++QT D +           ++  A  A A+       +V D   S   A++++    T  G    Y+     T+TRSGY++ R ++ AA V+  +LYT+ A+  S++ N+    L   I  SFR+
Sbjct:  116 RRQLLLRSTLAPFLVQLVLGSDDATTIVNSVLSAYGLPTL----KASAGFRVYDEFEDEFY--FEYPKAWVSRRNSMRKG-VVISDFQTADKVSVEELELPEDGDIAAAAVAAAVLP-GGRRLVQDDVLSLPAARLVKTHTETIDGQEMLYLEFPSETLTRSGYNIRRKNFAAAAVKLDKLYTIAASARSDQFNEEKKTLLQHIVESFRL 317          
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Match: A0A7S3A2S0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2S0_9RHOD)

HSP 1 Score: 57.0 bits (136), Expect = 4.830e-6
Identity = 57/203 (28.08%), Postives = 92/203 (45.32%), Query Frame = 0
Query:   57 APSSATTPTTVVNSVLSAYGMPMISNEGKFTSSYVKLDDGEQSTICAFAYPANWVETKRGGFITAANYQTGDGLV--FNVGTAGKAKAIGDLST-------LDIVADATPSEGVA------KILREVPVTKGGVNYTYVTVKYNTVTRSGYDVERISYIAATVRQRRLYTLVATVSSERRNKMDLELNAIRASFRVGDAGMIK 244
            A + A +  +VVN VLSAYG+P I ++G FT     L++     I  F YP+ W+ TK    I        D +V   N+G   KA+++   ST        D+  D      +       ++L++  +   G  Y   + K++T T SGY  ER + +A+TV    ++ L    S  R  K++  L     +F+V     +K
Sbjct:   58 ASAEAVSGRSVVNGVLSAYGLPQIPDKGGFTPI---LEEYGSDKIVEFLYPSAWLVTKEQSGIDRPRLNQ-DRVVPTINIGDYRKAESLAFYSTPASGKGTFDVPIDKLAKIAIQLPNPDYRMLKDKKIATNG--YRLTSFKFDTYTTSGYMGERRALVASTVIDDTVFLLGGVCSELRYKKVEELLLTAMENFKVTKVQSLK 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KBH7_9PHAE1.350e-8772.02PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FKW7_ECTSI7.540e-7772.46PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2UUM0_9STRA1.820e-2033.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J9WM49_9CHLO7.610e-1131.30Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A2V0NNW9_9CHLO2.200e-930.73Photosystem II oxygen evolving complex n=1 Tax=Rap... [more]
A0A5J4YSH8_PORPP5.280e-829.63Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A383W3H0_TETOB1.100e-630.00PsbP domain-containing protein n=1 Tax=Tetradesmus... [more]
A0A7S3A2S0_9RHOD4.830e-628.08Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 104..237
e-value: 9.4E-6
score: 25.8
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 97..237
e-value: 3.7E-13
score: 51.7
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 103..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:1070444..1074165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.253.1mRNA_P-littoralis_Contig8.253.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 1070444..1074165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.253.1 ID=prot_P-littoralis_Contig8.253.1|Name=mRNA_P-littoralis_Contig8.253.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=248bp
WPCLLQACHSIPFRFPGHGRAKVLLQCHSSSPGQIMFEAVLQQLSSRSRL
LLTQSLAPSSATTPTTVVNSVLSAYGMPMISNEGKFTSSYVKLDDGEQST
ICAFAYPANWVETKRGGFITAANYQTGDGLVFNVGTAGKAKAIGDLSTLD
IVADATPSEGVAKILREVPVTKGGVNYTYVTVKYNTVTRSGYDVERISYI
AATVRQRRLYTLVATVSSERRNKMDLELNAIRASFRVGDAGMIKAFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand