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Homology
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: A0A6H5K487_9PHAE (SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K487_9PHAE) HSP 1 Score: 558 bits (1439), Expect = 2.050e-193 Identity = 266/290 (91.72%), Postives = 285/290 (98.28%), Query Frame = 1
Query: 37 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDLCTASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERDLSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRRRS 906
MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFA GDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDS+VCEVS+RF+ CTASAFGD RL LVHEDAAEFVK+EGN+GYD+IIVDSSDPVGPAETLFQP+FYQNMK+ALAPMG+IATQGECLWLHLPLITTVLRAC+E+FGSVDYAFTTVPSYPSGQIGFV+ASVEERDLSTPA+TP++A T++LRYYSPEVH+AAFVLPVFAEKEI+GVRRRS
Sbjct: 1 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSVVCEVSRRFEFCTASAFGDARLKLVHEDAAEFVKKEGNSGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPASTPNAAMTEVLRYYSPEVHRAAFVLPVFAEKEIAGVRRRS 290
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: A0A835ZDK7_9STRA (Spermidine/spermine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK7_9STRA) HSP 1 Score: 449 bits (1155), Expect = 1.450e-150 Identity = 213/289 (73.70%), Postives = 246/289 (85.12%), Query Frame = 1
Query: 37 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDLCTASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERDLSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRRR 903
MSI +GWFSE E +WPGQKFSL+V++VLFHE+SDFQDVLVF S YGKVLVLDGVIQ+TERDE +YQEMLTHIPCFAH PK+VLIVGGGDGG+LREVARH VE I MCEID MVC+VSK+F+ TA+AFGD RL LVHEDAAEFVKREGN YD+IIVDSSDPVGPAETLF+P F+ +MK AL+P GI+ATQGECLWLHL LI VL +C+ F S++YAFTT+P+YPSGQIGFV+ S ERDLSTPA PD+A LRYYSP VH++AFVLP FAE+E+S VR+R
Sbjct: 1 MSITNGWFSEVEAMWPGQKFSLQVEKVLFHEKSDFQDVLVFQSATYGKVLVLDGVIQVTERDEFAYQEMLTHIPCFAHPHPKRVLIVGGGDGGILREVARHACVENIDMCEIDPMVCDVSKKFEFSTATAFGDPRLRLVHEDAAEFVKREGNGQYDVIIVDSSDPVGPAETLFKPEFFLSMKNALSPGGIVATQGECLWLHLKLIRGVLESCASTFTSLEYAFTTMPTYPSGQIGFVVGSTAERDLSTPAREPDAAMAQDLRYYSPAVHRSAFVLPAFAEREVSAVRKR 289
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: H3GAD3_PHYRM (PABS domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3GAD3_PHYRM) HSP 1 Score: 374 bits (959), Expect = 3.840e-121 Identity = 174/291 (59.79%), Postives = 232/291 (79.73%), Query Frame = 1
Query: 37 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDLCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERD--LSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRR 900
MS + WFSETE +WPGQKFSL+++EVLF +SDFQDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH PK+VLIVGGGDGGVLREV +H V+ + MCEID+MVC+VSK+F T A+AF D R+TL+H DAA +++ ++ +D++IVDSSDPVGPAE L++ FY+NMK +L+P G+I TQGECLWLHL LI V++ C +F +V+Y++TT+P+YPSGQIGF++ S+++ + L+ P TPD+ LRYY+P++H+A+FVLP FAE++I VR+
Sbjct: 1 MSTEKQWFSETEAMWPGQKFSLQMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDAMVCDVSKQFFKDTVATAFDDPRVTLLHADAAVYLRENTSDKFDVVIVDSSDPVGPAEVLYRAEFYENMKNSLSPDGVICTQGECLWLHLDLIVEVMQRCQNLFPTVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLAKPKRTPDAKMEQTLRYYNPKIHEASFVLPSFAERKIVAVRK 291
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: A0A3M6VRP9_9STRA (PABS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRP9_9STRA) HSP 1 Score: 373 bits (958), Expect = 6.230e-121 Identity = 174/285 (61.05%), Postives = 228/285 (80.00%), Query Frame = 1
Query: 55 WFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDLCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERD--LSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRR 900
WFSETE +WPGQKFS+E+++VLF +SDFQDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH PK+VLIVGGGDGGVLREV +H V+ + MCEIDSMVC+VSK+F T A+AF D R+TL+H DAA +++ N+ +D++IVDSSDPVGPAE L++ FY+NMK++L+P GII TQGECLWLHL LI V+ C +F SV+Y++TT+P+YPSGQIGF++ S+++ + L P PD+ LRYY+P++H+A+FVLP FAE++I+ VR+
Sbjct: 11 WFSETEAMWPGQKFSIEIEQVLFKGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDSMVCDVSKKFFKDTVATAFDDPRVTLLHADAAVYLRENRNDKFDVVIVDSSDPVGPAEVLYRAEFYENMKKSLSPDGIICTQGECLWLHLDLIVDVMTRCQNLFSSVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLIKPKRLPDAKMEQTLRYYNPKIHEASFVLPNFAERKITTVRK 295
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: A0A7S2HBD7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HBD7_9EUKA) HSP 1 Score: 373 bits (958), Expect = 2.160e-120 Identity = 184/294 (62.59%), Postives = 222/294 (75.51%), Query Frame = 1
Query: 37 MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRF-DLCTASAFGDKRLTLVHEDAAEFVKREGNNG-YDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERD-LSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRRRSV 909
M IKDGWF+E EV+WPGQ SL+V+EVL+ RSDFQDVLVF S YG VLVLDGVIQ+TERDE +YQEM+THIP H DP+ VLIVGGGDGGVLREV RHPGV+ I MCEID +VC+V+K++ TA AF D R+TLVH DAAE+V ++ YD++IVDSSDPVGPAE+LF TFY+ ++ A+ P I+ QGEC+WLHL LI VL+ C +F SVDYAFTT+P+YPSGQIGF++ S L P TPD A + L+YYSP VH AAFVLPVFAE ++ VRR V
Sbjct: 1 MPIKDGWFTEAEVMWPGQAMSLKVEEVLYEGRSDFQDVLVFRSATYGTVLVLDGVIQVTERDEHAYQEMITHIPMHCHADPQNVLIVGGGDGGVLREVCRHPGVQKITMCEIDPLVCDVAKQYLSASTAVAFNDPRVTLVHADAAEYVAKDDQRALYDVVIVDSSDPVGPAESLFTETFYKALRVAMRPGAIMCNQGECMWLHLDLIREVLKHCHSVFPSVDYAFTTIPTYPSGQIGFLMCSTSPGQVLRQPVRTPDPAVSASLKYYSPAVHAAAFVLPVFAETAVATVRRPQV 294
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: K3WTM8_GLOUD (PABS domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTM8_GLOUD) HSP 1 Score: 370 bits (950), Expect = 1.120e-119 Identity = 180/285 (63.16%), Postives = 216/285 (75.79%), Query Frame = 1
Query: 55 WFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDLCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERD--LSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRR 900
WFSETE LWPGQKF LE++EVLF +SDFQDVLVF S YG VLVLDGVIQ TERDE SYQEM+TH+P FAH PK VLIVGGGDGGVLREV +H VE I CEID MVCEVSK+F T A++F D R TL+H DAA +++ +D+IIVDSSDPVGPAE LF+ FY+NMK++LAP GI+ TQGECLWLHL LI VL C F ++ YAFTT+P+YPSGQIGF++ S++E L P P + + LRYY+ +VH+AAFVLP FAE++IS VR+
Sbjct: 11 WFSETEALWPGQKFCLEMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQCTERDEFSYQEMITHLPMFAHAQPKNVLIVGGGDGGVLREVVKHDSVEKIVFCEIDPMVCEVSKKFFKNTLATSFDDPRCTLIHADAAAYLRNNTTEKFDVIIVDSSDPVGPAEVLFRAEFYENMKKSLAPGGIVCTQGECLWLHLDLIVEVLGRCQNYFPTIQYAFTTIPTYPSGQIGFIVCSLDESKDALVKPKRAPTAEVQETLRYYNSKVHEAAFVLPQFAERKISTVRK 295
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: A0A067CIH9_SAPPC (Spermidine synthase n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CIH9_SAPPC) HSP 1 Score: 370 bits (949), Expect = 1.290e-119 Identity = 181/288 (62.85%), Postives = 221/288 (76.74%), Query Frame = 1
Query: 55 WFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDLCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERD--LSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRRRSV 909
WFSETE +WPGQKF L +EVLFH +SDFQDVLVF S YG VLVLDGVIQ+TERDE SYQEM++H+P ++H +PK VLIVGGGDGGVLREVA+HP VE I MCEID MVC+VSK+F T A+ F D RLTL+H+DAA F++ YD+IIVDSSDPVGPAE LF+ FY+NMK AL P GI+ TQGECLWLH+ LI VL F +V YA+TT+P+YPSGQIGFV+ S++E L+ P D T + LRYY+ ++H+AAFVLP FAEK+I+ VR+ +V
Sbjct: 6 WFSETEAMWPGQKFCLAQEEVLFHGKSDFQDVLVFKSQTYGNVLVLDGVIQVTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKKFFADTLATTFNDPRLTLMHDDAAAFLRNGDCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHIDLIADVLGRVGGFFPTVQYAYTTIPTYPSGQIGFVLCSLDESPNALNKPKRIVDEKTAENLRYYNSKIHEAAFVLPSFAEKKIAPVRKTTV 293
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: F0YCA3_AURAN (PABS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA3_AURAN) HSP 1 Score: 369 bits (947), Expect = 3.390e-119 Identity = 184/293 (62.80%), Postives = 226/293 (77.13%), Query Frame = 1
Query: 46 KDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDL-CTASAFGDKRLTLVHEDAAE-------FVKRE---GNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEE--RDLSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEI 885
K+ WF+E+EV+WPGQ+FSL+V EVL H RS FQD+LVF S YG+VLVLDGVIQLTERDE +YQEM+ H+P F+H +PK+VLIVGGGDGGVLREVARH VETI MCEID+ V EVSK+F TA+A+GD RLTLVH DAA +R+ G GYD+IIVDSSDPVGPAETLF+P FY +M+ ALAP G + TQGEC+WLHLPLI+ V+ AC ++F +V+YA+T VP+YPSGQIGF++ S++E L P P D L+YYSP+VH AAFVLP FAE+E+
Sbjct: 7 KENWFAESEVMWPGQRFSLKVGEVLHHSRSAFQDILVFQSETYGRVLVLDGVIQLTERDEFAYQEMIAHLPLFSHPEPKRVLIVGGGDGGVLREVARHACVETIDMCEIDAGVVEVSKKFFAESTATAYGDARLTLVHADAAADPAVAAALARRQTPGGWPGYDVIIVDSSDPVGPAETLFEPAFYDSMRAALAPGGAVCTQGECMWLHLPLISKVVSACRDLFPTVEYAYTCVPTYPSGQIGFIMCSLDESRHALVKPVRAPVGHLQDQLKYYSPDVHAAAFVLPPFAEREL 299
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: M4C138_HYAAE (PABS domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C138_HYAAE) HSP 1 Score: 368 bits (945), Expect = 5.470e-119 Identity = 175/285 (61.40%), Postives = 223/285 (78.25%), Query Frame = 1
Query: 55 WFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDLCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERD--LSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRR 900
WFSETE +WPGQKFSLE+ VLF +SDFQDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH PK+VLIVGGGDGGVLREV +H V+ I MCEID MVC VSK+F T A+AF D R+TL+H DAA ++K ++ +D++IVDSSDPVGPAE L++ FY++MK+ L+P G+I TQGECLWLHL LI V++ C +F SV+Y++TT+P+YPSGQIGF+I S++E + L P TPD LRYY+ ++H+A+FVLP FAE++I+ VR+
Sbjct: 11 WFSETEAMWPGQKFSLEIDHVLFQGKSDFQDVLVFQSATYGNVLVLDGVIQLTERDEFAYQEMITHLPLFAHKQPKRVLIVGGGDGGVLREVTKHDCVQKIVMCEIDPMVCHVSKKFFKNTVATAFDDPRVTLLHADAAVYLKEHTSDKFDVVIVDSSDPVGPAEVLYRAEFYESMKKCLSPDGVICTQGECLWLHLDLIADVMQRCRALFPSVNYSYTTIPTYPSGQIGFIICSLDESEGVLVKPKRTPDDKMEQTLRYYNAKIHEASFVLPSFAERKIATVRK 295
BLAST of mRNA_P-littoralis_Contig8.241.1 vs. uniprot
Match: A0A0P1ACQ1_PLAHL (Spermidine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACQ1_PLAHL) HSP 1 Score: 368 bits (944), Expect = 6.960e-119 Identity = 175/283 (61.84%), Postives = 224/283 (79.15%), Query Frame = 1
Query: 55 WFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDLCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWLHLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERDLSTPAATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRR 900
WFSETE +WPGQKF+L+V++VLF +SDFQDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH PK+VLIVGGGDGGVLREV +H VE I MCEIDSMVC+VSK+F T A+AF D R+TL+H DAA ++ N +D++IVDSSDPVGPAE L++ FYQ+MK AL+P G+I TQGECLWLHL LI V++ C +F +V+YA++T+P+YPSGQIGF++ S + + P TPD+ + LRYYS ++H+A+FVLP FAE++I+ VR+
Sbjct: 11 WFSETEAMWPGQKFALQVEKVLFQGKSDFQDVLVFKSTTYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVIKHDCVEEIIMCEIDSMVCDVSKKFFTETVATAFNDPRVTLLHADAALYLHENTTNKFDVVIVDSSDPVGPAEVLYKAEFYQSMKNALSPDGVICTQGECLWLHLDLIVDVMQRCQSLFSTVNYAYSTIPTYPSGQIGFIMCS-SGQSVDKPKRTPDAKMSKTLRYYSAKIHEASFVLPGFAEQKIATVRK 292
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FKW3 |
| Preferred name | SRM |
| PFAMs | Spermine_synt_N,Spermine_synth |
| Model size | 2242 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00003,RC00021,RC00053,RC00060,RC00215,RC00225 |
| KEGG ko | ko:K00293,ko:K00797,ko:K00802,ko:K05353 |
| KEGG Reaction | R01153,R01920,R02315,R02869,R08359 |
| KEGG Pathway | ko00270,ko00300,ko00310,ko00330,ko00410,ko00480,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00310,map00330,map00410,map00480,map00960,map01100,map01110,map01130,map01230 |
| KEGG Module | M00030,M00032,M00034,M00133 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003824,GO:0004766,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006575,GO:0006576,GO:0006595,GO:0006596,GO:0006597,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008215,GO:0008216,GO:0008295,GO:0009058,GO:0009108,GO:0009110,GO:0009308,GO:0009309,GO:0009653,GO:0009987,GO:0010033,GO:0015939,GO:0015940,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016768,GO:0017144,GO:0019752,GO:0030587,GO:0031150,GO:0031154,GO:0031288,GO:0032502,GO:0032787,GO:0034097,GO:0034641,GO:0036360,GO:0042221,GO:0042364,GO:0042398,GO:0042401,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046983,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0051703,GO:0051704,GO:0051716,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0071944,GO:0072330,GO:0090702,GO:0097164,GO:0099120,GO:1901564,GO:1901566,GO:1901576,GO:1990823,GO:1990830 |
| Exons | 7 |
| Evalue | 7.2e-202 |
| EggNOG OGs | COG0421@1|root,KOG1562@2759|Eukaryota |
| EC | 1.5.1.10,2.1.1.53,2.5.1.16,2.5.1.22 |
| Description | spermidine synthase activity |
| Cds size | 882 |
| COG category | E |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791642.5445676-UTR-P-littoralis_Contig8:1020041..1020077 | 1680791642.5445676-UTR-P-littoralis_Contig8:1020041..1020077 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 1020042..1020077 + |
| 1680791642.6406605-UTR-P-littoralis_Contig8:1031800..1033124 | 1680791642.6406605-UTR-P-littoralis_Contig8:1031800..1033124 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 1031801..1033124 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791642.5585084-CDS-P-littoralis_Contig8:1020077..1020146 | 1680791642.5585084-CDS-P-littoralis_Contig8:1020077..1020146 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 1020078..1020146 + |
| 1680791642.5682-CDS-P-littoralis_Contig8:1027209..1027389 | 1680791642.5682-CDS-P-littoralis_Contig8:1027209..1027389 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 1027210..1027389 + |
| 1680791642.5783072-CDS-P-littoralis_Contig8:1029652..1029757 | 1680791642.5783072-CDS-P-littoralis_Contig8:1029652..1029757 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 1029653..1029757 + |
| 1680791642.5889332-CDS-P-littoralis_Contig8:1030035..1030131 | 1680791642.5889332-CDS-P-littoralis_Contig8:1030035..1030131 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 1030036..1030131 + |
| 1680791642.6033702-CDS-P-littoralis_Contig8:1030765..1030852 | 1680791642.6033702-CDS-P-littoralis_Contig8:1030765..1030852 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 1030766..1030852 + |
| 1680791642.6145842-CDS-P-littoralis_Contig8:1031321..1031517 | 1680791642.6145842-CDS-P-littoralis_Contig8:1031321..1031517 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 1031322..1031517 + |
| 1680791642.6278841-CDS-P-littoralis_Contig8:1031651..1031800 | 1680791642.6278841-CDS-P-littoralis_Contig8:1031651..1031800 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 1031652..1031800 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.241.1 >prot_P-littoralis_Contig8.241.1 ID=prot_P-littoralis_Contig8.241.1|Name=mRNA_P-littoralis_Contig8.241.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=294bp
MSIKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVL
VLDGVIQLTERDECSYQEMLTHIPCFAHGDPKKVLIVGGGDGGVLREVAR
HPGVETIHMCEIDSMVCEVSKRFDLCTASAFGDKRLTLVHEDAAEFVKRE
GNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPMGIIATQGECLWL
HLPLITTVLRACSEMFGSVDYAFTTVPSYPSGQIGFVIASVEERDLSTPA
ATPDSATTDLLRYYSPEVHKAAFVLPVFAEKEISGVRRRSVAK* back to topmRNA from alignment at P-littoralis_Contig8:1020042..1033124+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig8.241.1 ID=mRNA_P-littoralis_Contig8.241.1|Name=mRNA_P-littoralis_Contig8.241.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=13083bp|location=Sequence derived from alignment at P-littoralis_Contig8:1020042..1033124+ (Pylaiella littoralis U1_48)
GCTGAGAGGAAGCATGCGTTGCTTCACTTAGTGACCATGAGCATTAAGGA
TGGCTGGTTCTCTGAGACTGAAGTCCTTTGGCCTGGGCAAAAGTTCTCGC
TCGAGGTGAGAGTATAACTGCGTGTGAGGGTTTTTGGGGCACACCAGCAT
ACCATCACACTGATTGTTGGTTCGATGTTCAGAGAGGCACCTGCCACACT
CGCACTTTCGTCTCTAAAACACTGCCTCCAGCTTGCGTAGGTAGAAGCAT
CTCCCAGTAGTTCCAGGTCATCGCCACCTTCCAGCGCCCAAGCTGCTCTT
CTAGATTTCAAAATGATGCAAGGCGGGTCAGGTCGCAGCAGGGGGTAGTG
GTTCGAATGTCCGGGCCGAGCCCGTCAACTCGAACTCAAATGGCCATATA
TTATCATGATACAAGGGCTCCGGACGCGGGGGCTTGACGGTCCCGGCGCC
CTCCGTCCTCCGTCTAGGACGGAAAGTTCATATTGCAATACGCCGAAGTT
TTAAGACATACACCAAGGGGTGCAGAATACGCAGACGCAGTTGATTTTTA
ATGTGGGTTAAGGTCTCAATATAATTGATCGATAACCCACTCATTTGTAA
CTGCTCCTTTGTGACGGCACACACATAATATGATACGTTGGATCCAATCT
GTTCCCACAAGTATAAATCTATTCTTAACTCCAATTCATACCGATAGACA
GCGATTCCAATCAATGCCTTGTAGCCGACATATGGCCTTAATTCTCGGGG
CCATGGCGGCGGCGGCGGCAGGCAATGTTCCATTACAACAGCGTCTTTTG
CCGAGCAGGGTAAGCAGCGCACATCGTATTATCCACACACAACAGACCGG
CGCCCAGAATATCTCTCTCGTCGTGTCTTCTTGGTCGTCCATGTGCGATG
TTTTTTACTTCGATACTTACATTTGACTTAGTCATCGGTCGGGTGTGTGC
GGTGCAATCGGGCTCCCCCCAAAAAAAATCTGTGTTTTTTGTTAGGAGTA
CTGGGCAGGAACGAACATAAAGGATTCAGCGAAATGTAGATTCTCTATCA
TCGTATCATATGGCACGTACTGGTCTTAGAACAGCCTCTCTCGCATTTGT
TCCGGCCCCAAACATGTGAACATTCGCGTATCTCGGATGAGCTGCAAATT
AAGGTCTCTAATCGCACTACCACTATTTATTGAATACATCTCGAAGGTCC
CAGATTTACAAAAAATAAGGCAGCAGTAGTCTGTCAACCAACTGCTCTGC
TGCTGGAAAGATTCGCTTTGGAATTACCTCATCATTATTTGGAGTTCAGA
ACAACTCAGAGCCAACCTCGGTCGGGTCTGCTTCCGCTCATTTTCTGTCA
GTAATGAGGCTCGGATGTATGTTGTGTGTCAGCCCACACCACCCGTTGCA
TATAATATTGTAACCCTTCCCAAGCGTTACAAGACCTGAAAACTCTTGAG
AGCGTTTTAAGATATATAAATAAGCATCATCGCGCATATGTATAGCGACC
TCAAATCAACTACGGCAGACATGTGCCAGACCAAAAAAATATACAAAAAA
TAACTCAGAGATGATTCCACCTAGTTCAGTATTTAAGGCTCTCGAGCCCT
GAGAACGCCGGGATGGCACTTTGGAGCGATTTCCGAGCACTGTGATCACT
TGATGTTCGTGTGAGAGCAAACGGAGTTAAAAAGTACTTCCAAGTACCTG
GTACCTAACTCTATGCACAGAGGTGTAGACCGCCCCCGAGACACCCCTCC
TACACCAGCAGCGGTGTCATTCCATATCATACCTCGATCATGATGGTAAA
TTGTGTATAAACATCACAGTTGCGGTACCACCAGTAGGGGTTATACACTG
GCATGTGGTCCTCAACGAAGTGCTTACATACGTATGCAGCTGCATACCAT
TCCCTTACAGATTAGCAATTCCTGCCAGACACTGCTGTTGTACTGCGTAC
TTCTGTATGATACACCGTAAATGCGTACCACAAGTACGACCGTACTTGTG
ATTCGGGCGGGGATACAACCGCAGAGCTCAAAGTAGATACTCGTAGGGTC
GCTTTCATCGTTCACTTGGTACCGTAATGCAAAAAAAGCTCCCAATCTTT
GGTTACCATCAATTGCTTGTTTTCGGACAAGTACAGCAGTATATATCTCC
TGTACAAGTATCAGGTACATTGATGGAAATATGCTTGTCATTGATGGCAT
GCCGTCTAGTTTAACCAACATGCTGGTCTCTAAGGGCTTGTTTTAACGAT
AAATGTGACCCCCGGAACTGCTTTTAAGTGGTCAGTCAACTTCTGTATTC
TACGGGGCTAACTTTCACATCCCACGGGGCGGGGCTAGCTTTTCCTTGAA
ACAAATCACCTCTTTAGAGGTTTATTTGAAGTCCGACGAATTGGAATTGG
AATGGCCAAGGGAGTTGGTGCGAGAAACGAAAGGCGGTGGATGAAATGGC
AACAAGTTTCGTGTACAGCACAGCAGTACAGCAGAAGTGTTTTCAACCAA
AGAGACCGACGAAACGCACGCACGCAGCTAGCAGCAAGCAGCTGCTGCTG
TTGCTGTAGGAAGACCTGTGGGGCGCACCCACCCTCACACCCACACTAAC
TCACACACACTCGTATATACTCCGGAGTACTTTATACACACACGTCTGCT
ACGTGCCGATGACTGACATGAACCGTAAAGTATAGCCAGCTGGCAGCAGA
TGGTGCCACGTCTGCTGAGCAAGGCGCCTACCGCCGCTTGTCGGCGGACA
CTAGGGAATACGTGCGCTTGAATGCTTGAATGCGTTCTACAGATAGTCCG
CGCTGGCGTTCAACCGCCTGTAAACCGCAGTTGCTTCGTCGGGGGTTGCA
TGTACATTGCATTCTTGGAACGCAGACCAGCTACAACTTCTCCACCCAAT
CCAGGTGTCACATTTTTCGTTAAAACGACAGAGGTCTTTTTTTCTTAAAA
TCTAAAAGGTCTGCTCAAATAAGGCCTCCAATCCGGTGTTACATTTTCCG
TTATAACAAGCCCTGATGGTCAGGTCCAGAAGATTAACTTCGTACTTTTT
TATAAAAAAAATGGTGACTCTCAGACCAAGACGAAAACGCTGTCTCCTCA
GAATCAGCGTTCCTGTTGACTTTTGTGAGGATTGAACCCTGAAATGATCA
AATACACCATAGAGCGGTGACCTCCGTGATTGCACGTAAGATCTGCTGTT
GGGGCCGAAGTATCAGAGGTCGAAACTATTCACCAGGAAGTCCAAAACGA
GTCCGCATCTTAGCCAGAACCCGAACATATACCAGTGCTGTACTCGTCGC
CACTGACTCCGCTGGGGGTCTTCACCAGTAGGTAACGGTTTGTTGCAGTA
TCTCTTGTCCCCAGCAGCTACTGCTGTTGTGAACCCGAAGTTCAAGAGAT
GAGACACGTGGTGACGAGTACAGCAGTGAACACGGACAAGAAGTTGTGAA
GGATCTGGCTGAGATGCGGACGATTTCTGGACTTCCTCAACGAACATTTC
GACCTCCGATATCCCAGCCCCAGCAGCAGATCTGAGCGTGCCGTGACGCA
GGTCACCGCTTAAGTTATCTTCTGCTCATTTCTGGGGTCATCATCCTCAC
ACAAGTCCACGGGAACGCTTATTGCGACCAAGCTGCGCTATCGTCTGGGA
TTGGGACTGAGCACTTCAAAAAGTAAAAAAACTTCTGGACCGGACCCTGA
AGGCTCCAAGGACAAGGCTGGTAAAATAAATCCTTTGGGAAAACCTTACG
TTAGAATCGAAATAATTGATGACCAGCGGATTATATATTGGTAGGGAAAT
TTGACATGATTTTTTGTCCGTTTTTGGCCCATATCTGCACGAGTAACCGG
CAGTTTGTGGATTTTAAGGCGGCTTCGGGTGCCGCAGGGTGGACTGGGCT
ATATTCGCGCTGGAAAAAATTGCCACAAAAAGAGCTTTGTTTCTAGTGTT
TCGTTTTTGGTCCTTTTTTGCCTCAATTCAGTCGTTTTTCGGCAAAGAGT
TTTTTTTTTGGTGATATGGGAGCTGCGATAACTTTTGGACATCAACACCT
CCTGCCATCCTTAACTTTTCTATTAAGAGCCTCGAGAGGGATGAAAATTT
TGTGTCGGCACGAAACATCTGTCTGCGTTGCAAAACCACGAAAAACGCCG
TGGGCGTGTGGGAACTCCCGACATTGGTGTAAAAGATAAACAATCACTTG
AATCGCTGTATTATATGCTGTGTCTCATGGATTGCCCCATACTCTCGGTA
CAGCAGTAAGTCTAACCCATAGCCATACCCACCCGGCGCTACTTTGCCGC
ATATTACACAAATCTGAATGCTCCAGCTCACCATATGGATCTCATGTCTC
TTATAATACCTATTACGCCGCATTGCTTGCGTTTTTGGAGAAAAAACACA
CTCACGCACTCGCGAAAAATTTTAGCGGTGCCGCTTTATCTCGGAGGACA
CACGGCCAATCGTATGGGTTCCCCTCCATGGCAGGGCACTGCCCTGGTCA
ACAGCTGCGTCGATTCTGGCATTTCTGCATATGTCTTGGTTCGTGATTCA
GCATATGGAACCAAACAACTGGGGCGATGCTTGATTTCCCTTCGCTTGTG
CTGCAATTCGATGAAATCAAAAGCAGAAGTGAGAGTCAGGGGGCATGCCG
TTCTTTTTGAACCTCCTGCAGGCTCTAGGGTGCCTTGGTTGTGTTACTGT
GCTTTGTGAAAGGCAGTGAGGTCAAGGGGTTTCACAGCCCGAATTTCTCC
CTGACTGAAGTCTTTAAATTCAACGGAAACCCAATGTCCTTCCTGCGGCA
CCCGAAGCCGCCTTAAAATCCACGAAGTGCCGGTTATTCGTGCAGATTTG
GGCCAAAATCGGACAAAAAATCATGTCAAATGTCCTTACCTGAAAAGAAT
CCGCTCAAGTCAAATAAGCTGATTTGACTTGATGTTGAAGGAGTCGAAAA
AATCTTGATACTTCGAAGTATTTATGAAGGAGATTGGACGTAGACGTGTG
TGATATGGATGTCAGGAGAAGCCCCTGCCGCCGCTGTGGGCGATAACCAA
CAGATTTTCTCTTCCTCGATGCCTTCCAACTGGTGTTAGAAACCCGGTGT
GTGATTATCAGGTTTTCCTTCTCGCTGTTTAAGTCAGTCACTCAAAAATC
GATTGTCCGTATAAGCAGGGTACGATCTCTCTCTCCCTCTCTCTCTCTTT
CGCCAGTCCGCCAAAAGCTGCTAGTTATTTCTTCTGCGGTCGGCGTGCAC
GACGTAGTGTAACACCGAATTTTCAACAATACTCTCCTCTCGTTTGTAGT
TCCAATAGACGTGGATTTCATTTGTAGTTCCAATCTAAGCGTAGGTGTCG
TTTTTGAAGCGTGCCAAACGCCAGACACATTTAGACGTGAACAAAGGTTT
GTATACAGGCATGGGATTACGGGATTTTATGAGGTTTCATAATAAGAAGG
CGTTTTCCGTCTCCGAAGGCTGTTTTTGTACGTCGCTCTTCATGGACGCG
AAGAAACACCCGCCCTTTCCCATGGTCTCGTGCACTAAGACACCCACCGC
AGAGCCCACCTCTTGAAACTCGAACTGTGTGCGGACTGTCGACAGCAAGA
AGCATGTTCATTGCAAGTACAAATGTGTCAACTTTGTGTGGTCTGTAGTT
ACATACCTCACACGCCAATGGCGTTCCTTATAGCCGTCGTCGTCTCGTCG
ACGCACCGTCGGTTCCAAACCCTACCTTGTTGGGCTGCTGCACAGCCGCC
TGATCTGCGCGCATATCCCCGTGCGTCAGCGGTAAAGCAGTCGTCGGACC
CCATCGAGTCAAGGTCATTGGATCATGGAATGCTCATGATGAGTCTACGT
GTCCATGCGGCCGCATTATTGTCCTACAGGTGATTGAAGGCAGTCATGAC
GATAATGCGCGACAATATCGCAATCCAATCCCACGTTTGATGAATTTGAC
CTGGTGTACTTCGTATATACCAAGAACGACATGATACATTTTTCATTCAC
CGCGGGTGCCCGTTGTCGAGCGCTAGTGGCGCCGCTGCTGGGACCGTTGA
AAGACACAGACTCACACGCAGCAAGTTGTACACTCAAAGGAATCCGAAGT
CAAACCTTGGGCCTTGTGGGAGGATGATGAGCGTGTACGACTTGTTTGGG
AACGACATGTCTACAAACTGTATCGTTTTTATGTTTGGCAACAGGTGGGA
TATGGCGGATGTTGTGACGTATGTGTGCTGTGAGGCAGGAAGGCGGGTCC
ATTAGGGTTTTTGTCCTGCCGAGCCAAACACAACGCAGGAAGCAGCGACT
AAGCTGAAAAATTGTCAGGGTGTCTACCGATGAAAAAGTGTGCCGGTTTT
GGCTACTTGTGAGAAGGGACCACGGGTGGACGAACGGGTGAATTACGAAG
TGAAAGGCCTCAAGCTCGAAAATGCACACGTGCTCTGAAAGGAAAAAGGG
GTTGTAATGTAGTTTTCGCGTCAGGGTGAACTGCAAAGCTTTTTTGAATG
TTGGGACGTGGAAAAGGTCAACTTCACCTACGGCACCATCTTTGCCAAAA
GAAGCAGGGGGTATACCCCTTTTCTCAGCCAGAAATGTTTTCACAGTCCC
GCCTGTTCGTGGAGATACCTCCATGCCCAAAAGTACCCCGTTTTGCGATG
GTAAATACCATGTCAATACACATCGCAACAGCAGACCACGTTATTTGTTC
GCACCGCAGCATGACTCAACCGGTACAAGTCGTAGCGTAAAAATTAGATC
ACAGCGGTCGACTATGGTTTTGTTCGCGTGTTTCTGCTCTGGTGAAGATT
TGCACATGCACGAGTTGTGTTCCAACAGCCGCGGCTAAACACGCCGTCTC
GTATGGTATGGTATAGGCACACCGTACTAGGTATGACACATGTACGTATC
TTTTTTACATTTATGTTCAAATTGCAGGGGGCGTAATTATACATGGTTGA
ACCAGCTCAACGCTGGAGACAGGTTTCCTTTGCATAATGTTTTTTGTTGC
AGTGCATCCAAACATTCACGTTGATGGTCGTACTCATATCGCCTAATTAT
ACATAGTTGAACCAACTGAATGCTGCTTTACAGATTTCGTTTGCATGATG
TTTTTGTTGCAGTGCATCCAAACATTCACGTTCCAAACATTCACGTTGAT
GGTCGTACTCGTATCCAGGTGAAGGAGGTGCTGTTCCATGAACGATCCGA
CTTTCAAGACGTGCTGGTGTTCGATTCAGTCCACTATGGGAAAGTGCTCG
TCCTCGATGGAGTGATCCAGCTGACCGAAAGAGATGAATGCTCGTATCAA
GAAATGCTCACGCACATCCCGTGCTTTGCGCATGGCGACCCCAAGAAGGT
GATTTTGTTTGAAACAAGTGTTGAACTCTAGCAACTCTGCACATCCTCTA
CAGGCTGGTTCACGGAAGACGATACAGATGTAGCCGACATCATTTTCTCA
CGCGGTTTTGTCGAGTTAGATCCTGAAATGTTGCAGGCATGTTTTATGGG
TCGCTACGCAACTTTCGATGATCGGGGCTTTTTTGTTTCTATTTATTCGG
TAGATATCTTAGTATACAGGTATTTGGGACTACTTTGGCCACCTGGGACC
CCGGATATCTGGTGCACAAAAACAAAAATGAAAAAAAAACGGTCATACCA
AGTTGCGCAGTGACCCATAGAACATGCCTTCAAATTTCAGGATCAAACTC
GTAAAAACCGCGTGAGAAAATGCGCTTTAGTAAGGTCGAGTCCTGCATTA
ACTACGAACTACTTGAATTTAGTAGAGAATCGGTCTTTTTGGGGATTTTG
AAAGCAATAATTAGCCAAAAGTAGGCCAGTTTGTGTATGTGAGAAGACTT
TTTTTGTAAGTACTTCCCTTGGATCCCATGAAGGTCACCTGTGTTAAGAA
TATTAAAAAATAAATCAGGGGCCGTGTTTTCTGGGGTCCGGCGTTTGGGG
CTATCTCCAATTACTTAAATAAATTAAGGATTTGACCCTCTTGTTTAGAA
GTTTACAGCTATCATTAGCCAAACTAAGTCAGTTTTTATGAAATTTCGAA
AAATAAAACCGTGAATGCCCTCCTTAGGACACAGAGAGACCATACCTTTA
AAAAAAGTCTACATCTCGAATTGATGTCATATAGAAGCTCTTAGTTTAGA
GAGCCTGATCTTGGGGGGTGTTATATCACGTATTTCCGTGCGATGGCACA
TTTTCTCCTCTAGCGCCACCGCAAGAGTCTTGGGACAAAAACCAATGGTG
TCATGCTCTTCTGCTATTGGTGGCGGTCAGTTTGGTACCAAAGATCTCGT
GATCGAGTTTTTATTGCGCTCGGGACAGTCTGTTGACTATATTTGGGTCT
TTTCCGTGAACCAGCCTGTACGGTCCATGTGAGCGCAAGGTTTTTACACC
AAAACCTGTAGCACCACTTGCCGGCACATGGTATAGTTACTACTTGCTGC
CCCAAACACTGACGCGTGTTAAGCAGAGAAGCATGGTCGTGTACCAGATG
ATGTAACTTCACAATATCAGGGGTATTTTTGCTTACTGACTCGGTTACTT
GCATGTTCAAGGGTGCCGTTCACAAGGTTCACTCCCCATGTGAGCAGCAG
TCAAGCCTTCGGAAAAATCTGCCACCGAGCGCCTGACCCCGCAGGACCAT
CAAACAAGTGCTCTTTGTTATGTGCGAGCGATAAGCAGTCCGTTTTTTTC
ACTCCTCGCACACATTGTGTTCGATGCACAGGTTGAGAAAGATCGATCGC
GAGACAACGTTACCTCTAAACATGGAGGAAATCAATGTATTGCTTTTGTG
GTTTTTCGATGGTACGTCGTCGCAGTTGGTCCTTCCCTGCTGTGGAGCAC
AGCAAACTTACCTGCAGACGACCTCACCATTCTCGCAATCCTCGATGATC
CTCCCCGTGTTACAAGATCCAGTAGCACCGGGACGATATTCTCGGGCTTA
AAATAGCTCCTACAAGAAGTCAGAGATACGTACTACTGAACGCGTTCAAG
AAGTGCAGCAGTCAGTTAGATTATCTTTCGCCGTCTTGTCGGAAAATACA
GAAAGGCAACAACATCAGTAGCGGATGACACAGTGAACAGAAGCTGAAAA
TCCTCCTGTAGTACCAAACAGGGGGTGACAAGACTGCACACCATACGCAA
GTGGTGGCAGTGCACAAGGCAGTTGGACGATGAAAATGCGAGTCCGACGT
AGTTCTGTGGAGATGTTCTAGACCGTCGCGCGGAATGCTTCTCACGGTTC
CGTCTTGCAAAGCTTGTGGAAGCTAGAAAGTTTTTGGAACCTCATAGTCT
AGAGTTCGAGAGAACGCGAGTGACTGCGCCCCGACATTCCCACTTTCTCA
CGCTCACTACTGTAACCCTTCTAGTCCGCAAAGCCTGGTCAAGAGTCACT
AGCACAACACTCATCTCCGAGCTTCGGCTGAACAGAGAGCGCGCCGTGGC
ATCTTTCGATTTTGCGCTGAATTCTGCAGCGATGCACCCGACGCTAGGCT
CTGCTTCCCACTGCAGTGATCTAGTGATGCTTCCAGATTTTTTTACTCTA
CTTTGTAAAACGTCGGGACGTACCCTGCGAAATTTGTGACGTGTCGCGTC
TCGTCGTAAAGGTTCTGATTGTAGGAGGCGGAGACGGCGGTGTTCTTCGA
GAGGTGGCTCGTCACCCCGGAGTGGAAACTATACACATGTGCGAGATCGA
CTCGATGGTGTGCGAGGTGAGCATTTTTTGTGTCGTATGACAACCCTTAC
GGCAACAGTATTGCAAATTCATCCAGATGTGATGGGAAACAAAGAGCAGG
TGGCACGAAGAGATGCACCCGAGTCTGTTCTTCGCGTGGAATGCGCTCAA
AAGTGATTAGAATAGCTAAATAGCGCCTTTGCTGACCGTTTCCTCACCCT
GCACCTATTTTTTGTGCTGGCATCACCGCACGACTCCTTTTTGGTCCGGT
CAGTGGTCCGTATCTTTCAATTGTCACGTTTCGGGTAATTGCAGGTGTCG
AAGCGTTTTGATCTTTGCACAGCGTCTGCCTTCGGTGACAAACGTCTCAC
GCTCGTGCACGAAGATGCGGCAGAGTTCGTCAAGAGAGAGGTGAGAAAGG
TTCCTGATCCCCCCTTCGGAACACGGTTTCAACACCTGTATTTGTCGCTG
TGTCTCCGACCCTGCGTACACGCACGCACCATTTCTGTGGGTGATGAACG
GCATGCCTCAAGTTTCCGTTGGTCCCTGTGCCCACCAGCTTACCTTTTTC
TAGTGCAGACACAAACGCCGAAGGTAGCTACGCTGCCCTTTGAATAGTAT
TATTTGATCTTGACGTCGTTTGGCCTTTTTTGCTGGCTGCTGCGCATTCA
AACTGCTTTTCACCTCCGAAACTTTGTCCGGCACTGGCAGCATGAATTTG
GTCACGATCATTGGTGGCTTTTTCATATCGTAGAGCCTCGCGAGGTGCAC
CGTTGCCTCTTGTTGTAGGTTAGCCATGGTCACCACGGCGGCGATGTGTT
GATGTTTCAATGAAATATGCGCGTTGTGCGCCAACGATGGGTGGTTCCAC
GATAGTATTACACACCCGGGGTAGTATGCAGTGACTTCAGAGGCGCGGAG
GATGTAACATGCGGTACTAATGAGTTGGCTGCGATTTTCACATGATGGGA
AATCCCCCAATTTGTTTGACATTCTCGCCTTTGGTCTTTTGCTTATCGCT
TTGCAACGTGCCTAATTTCTGCAGGGAAACAACGGGTATGACATCATCAT
CGTGGATTCGTCCGACCCTGTTGGTCCTGCTGAAACTCTCTTCCAGCCAA
CATTTTATCAAGTGAGACAGTGGTTATGAGAGAAGAAATGTCCATGTCAG
ATGTCTTCCGTTTCATTCATTTTGACCAGCATGTAGTTTCGCTCGGATGG
CACGAACCATCGTCTTCCGGTACATGGCCGCGACCTTTTCTATCCGGCAT
GTGTTGGGTGACTGGGGCATTGGCCGTCTACTTGAGGTGACTGCGGACGA
CCCGTGGAAATGGAAATTGTTGAAATGTAAAACTGGAACAGTTGAGTAAC
GACATATCAGTAACACCATCCGAGCACGATGGCACCCAGGCCAAACAACA
CGTGCGCTGACTACAGAGCTCACCTCACGGCAACTCTTTGGACCTCTGAT
ATGTCGTGGTACCATTCATGGGTGTGTGGAGAGTTTTTGTGTCGCGCTCG
TGTTGTAAATTTCTCGTGGGACACTTTGACATGTTTTTGCACGCTGCGCC
GCTTGTGACTGCCCGTATGTTGCAATCCAGAACATGAAGCGGGCTCTGGC
ACCCATGGGGATCATCGCGACGCAAGGAGAATGTCTGTGGTTGCACTTGC
CGTTGATCACGACGGTCCTACGTGCGTGTTCTGAGATGTTTGGCTCCGTG
GATTATGCTTTCACCACGGTCCCCTCGTACCCCTCCGGACAGATCGGTTT
CGTCATTGCCAGCGTAGAAGAGCGAGGTAAGTTGGAGATTAGATGTGAAA
GACATTAGTTTGTGAAGGATGAGACATATCTCTCTCACGCTGGCAGCCCT
CATGAGACACGTTCCTAACGCAATATTCAATCCCATCGGTGCTGCTGACA
CTGCTCGCAGATTTATCAACACCGGCAGCCACGCCAGACTCTGCAACGAC
CGACTTGCTACGATACTACAGCCCGGAGGTACACAAGGCTGCCTTTGTGC
TTCCCGTTTTCGCAGAGAAGGAAATATCAGGCGTCAGAAGACGTTCCGTA
GCGAAGTAAAAAGAACGGCATTGTCAGCCAGCGATTTGTGTCTAATTGAT
ACGATATCATACAGGGTTTCACCACGCCAGGATGTTGTTGCGTCCTCAGC
AGCTCCGTACATGATGTTGTCAGCTTGAGGCTAGTACGTGTACTACACCT
CGAAGCCCAAAATGTTTCACCAACTTTTGACTCGGGCGCGTGTCCCGAGC
AGTCGCGATTCGAAGATTAATAGGGGCAGTCTAGAAGGGCTACAGAGAAA
AATCACAGCAGGTGACAAGGAGTGCAGCATGTGGGCCAGCCGAAGTGGAA
GCATTTTCGATCAAGGAGTGCTCAAGAGATGTGGTGGAGACGAGCAAAAT
TGATGAAAATTGCGTACATCACGTGCCTTTCTCTCTTATGGCGGAGTTTG
TGTAGCGACAGCAGCAACTCGTAGACGATCATTTCTGTTGTAGTTGTAAT
GTACCTGGCAGGTGCAAATAGTGGCCAAACACGATCCGCATAAAATTTAA
ATAACAAAACCAACTAGATGCTTGTAGTAGCCCCCCCCCCCCACGTGGTG
CTCGAGGCACCAAACGTGGTAATCATTACTCCGGAGTACTTGTATGTTAT
AATTCAGCACAGCGAAATCCTGCCTAAAGTTCGGCACTTTAGCGGAAGGC
GAGCTTGCGACGGGGGCGAGGAAGAATAGAGGCGATCCTCGCGCACTGTC
GGTCGGGATACCTCTTGACTTTTCTCGTGGGGATATACATCCTTACATCC
TTGGGGAAAGCCGGCGGGAAGGGTTTTATATGGGTTTCGGTAATCCCTCC
CACCGGCCAACCCTTATCATTTCCCGCCTTACTGGATGTCCAACACACCT
TGGACAAAGGCCTTTTGAATAGGCATATTGGTCGCCCAATAGGTCTTGAA
GTAGCCTATCGTTACCTATTGGTCATTTCGATATGCATTGCGACCACATA
TCGATACATGTTGGTCATTCCAATGGGTATTGCAACCCTTGATCGATACA
TATTGGTCACCGGTATTGCAATCATCGATCAATACGTGGTGGATATTCCA
ATAGGTGTTGGGATGGCATATCGGAAGTTATTCGTTTGTCAAAAGGGGCA
ATTGAACTCATATCGGAAGCTAGCTGTTGGATTCTGCAATATGCGTTGAG
ACATCATATCGGAACCTACCGTAATTGTGCGGGTCATCGCACCGGGTGCG
ATCGCGATTTTAAATGTTTCTTGATTTTTTTTTCGCACCCCGGTGCGATA
ACCCCGATGGGTGCGATAACCCCGGCAGGGGTGCGATAATACAATTAAAT
GTTTCGTTCTTGGTGGTTTTTGCGCACCCCGGT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig8:1020042..1033124+ >mRNA_P-littoralis_Contig8.241.1 ID=mRNA_P-littoralis_Contig8.241.1|Name=mRNA_P-littoralis_Contig8.241.1|organism=Pylaiella littoralis U1_48|type=CDS|length=882bp|location=Sequence derived from alignment at P-littoralis_Contig8:1020042..1033124+ (Pylaiella littoralis U1_48)
ATGAGCATTAAGGATGGCTGGTTCTCTGAGACTGAAGTCCTTTGGCCTGG
GCAAAAGTTCTCGCTCGAGGTGAAGGAGGTGCTGTTCCATGAACGATCCG
ACTTTCAAGACGTGCTGGTGTTCGATTCAGTCCACTATGGGAAAGTGCTC
GTCCTCGATGGAGTGATCCAGCTGACCGAAAGAGATGAATGCTCGTATCA
AGAAATGCTCACGCACATCCCGTGCTTTGCGCATGGCGACCCCAAGAAGG
TTCTGATTGTAGGAGGCGGAGACGGCGGTGTTCTTCGAGAGGTGGCTCGT
CACCCCGGAGTGGAAACTATACACATGTGCGAGATCGACTCGATGGTGTG
CGAGGTGTCGAAGCGTTTTGATCTTTGCACAGCGTCTGCCTTCGGTGACA
AACGTCTCACGCTCGTGCACGAAGATGCGGCAGAGTTCGTCAAGAGAGAG
GGAAACAACGGGTATGACATCATCATCGTGGATTCGTCCGACCCTGTTGG
TCCTGCTGAAACTCTCTTCCAGCCAACATTTTATCAAAACATGAAGCGGG
CTCTGGCACCCATGGGGATCATCGCGACGCAAGGAGAATGTCTGTGGTTG
CACTTGCCGTTGATCACGACGGTCCTACGTGCGTGTTCTGAGATGTTTGG
CTCCGTGGATTATGCTTTCACCACGGTCCCCTCGTACCCCTCCGGACAGA
TCGGTTTCGTCATTGCCAGCGTAGAAGAGCGAGATTTATCAACACCGGCA
GCCACGCCAGACTCTGCAACGACCGACTTGCTACGATACTACAGCCCGGA
GGTACACAAGGCTGCCTTTGTGCTTCCCGTTTTCGCAGAGAAGGAAATAT
CAGGCGTCAGAAGACGTTCCGTAGCGAAGTAA back to top
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