mRNA_P-littoralis_Contig8.236.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: D7FKW1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI) HSP 1 Score: 435 bits (1119), Expect = 2.330e-146 Identity = 234/251 (93.23%), Postives = 244/251 (97.21%), Query Frame = 2
Query: 230 MSLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIYV 982
MSLN+ ASHDPFYAVRDEVSAKIEYIKVR+ERFQDLLNNTNTAQNRDFQDLR+GL+KEVKGADAQLRDLRRTVEYVENNR+SFAHIDNAELSERKTFLSDSKQVLL AS+ALDGQQTK KMAQDDRSEMAKYRS GDLGARTE+ERDNTEH+LD QSRVRMQLARQDEDL+EL THVERVGETATVINEELRSQNRLLTALDDDMDEATE MNFVMGRLGKLLKTKS+CQIWTILLLSFILIILVLMLIYV
Sbjct: 1 MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 251
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S3K6G0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6G0_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.560e-56 Identity = 111/235 (47.23%), Postives = 170/235 (72.34%), Query Frame = 2
Query: 227 TMSLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTI 931
++ L + ASHDPFY V+DE+ K+E I R+ER+++LL NTA + +F+++++GLS+EVK A+AQ++DL TVEYVE +R +FAHID+ EL ERK F++ +K L GA + L G + + K+ D++ ++A R G+ GA+T+IE NT+ + +Q ++ R + QDE+L+ L + V+RV AT I+ EL++Q+RL+ L+++MDE TE+MNFVMG+L KLLKTK CQ+ TI
Sbjct: 9 SVPLMSAASHDPFYVVKDELVNKLESISSRLERYENLLWKINTAASVEFKEVKKGLSREVKAAEAQIKDLALTVEYVEKDRNAFAHIDDRELDERKKFIATTKNKLSGARDVLTGPKARAKIEADEKQQLAATR--GNYGAKTDIEMANTDFIHNQHAQTRTIMQEQDENLEHLDSAVDRVHRMATEIHGELKTQSRLIGDLENEMDETTEKMNFVMGKLAKLLKTKDTCQLLTI 241
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S2S2M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA) HSP 1 Score: 200 bits (509), Expect = 6.650e-56 Identity = 110/244 (45.08%), Postives = 167/244 (68.44%), Query Frame = 2
Query: 248 ASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
A+ DPFY V+DE++AK+ I+ R++ F+ LL T+TA N+DF+D ++ L +++K A+ QL+DL TVE+V+ +R FAHID+ +L +R T+++++KQ L G K K+A D R ++ K + +LGA + +NT + QQ++ RM + +QDEDL+EL V+RV + A IN EL++QNR+L L+ D+DEATE+MNFVMG+L KLLKTK CQIWT+++L F + +LIY
Sbjct: 3 AAQDPFYVVKDELTAKVHTIQKRLQTFKRLLETTDTATNQDFKDSKKALGRDLKAAEKQLKDLTLTVEFVQKDRAQFAHIDDYDLQQRTTYIAETKQALGEIKAYYSGDDVKRKLADDMRKDIMKQPT-SNLGATSSDAMENTHFIQGQQAQQRMIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIY 245
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S2FMQ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.510e-54 Identity = 109/244 (44.67%), Postives = 169/244 (69.26%), Query Frame = 2
Query: 248 ASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
AS DPFY V+DE+S KI+ I + +F +LL++TNTA++ +F+D RR L K++K A+ QLRDL TV+ V+ +RE FAHID+ EL +R ++ +++ L + G++ K KM D+R+E+ + + M LGA E +NT+ + +QQ++ +M + +QDE+L+EL V+RV + A INEEL+ QN++L L++D+DEA E+MNFVMG++ KLLKTK CQIWT+++L V ++IY
Sbjct: 3 ASVDPFYVVKDELSMKIDAITGKTVKFLELLDSTNTAKSPEFKDARRSLGKDLKSAEKQLRDLTFTVDMVQKDREQFAHIDDYELEQRDAYIKKARKNLNEMKSTYQGERVKRKMIADERAEI-ESKPMSSLGATNSDEAENTQFIHEQQAQGQMIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIILVXXXXXXVFLVIY 245
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: F0XYP6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP6_AURAN) HSP 1 Score: 187 bits (474), Expect = 9.260e-51 Identity = 102/249 (40.96%), Postives = 177/249 (71.08%), Query Frame = 2
Query: 236 LNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNT-AQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
L + ++DPF+ V+DE+ AK+E I++RV +F LL T A ++ F+D R+ L +E++GA+ QL+DL TV+YVE +R +F+HID+ ELSER+ F++ ++ + A +A+ G + + KM DD++ +A + GD GA T++E NT+ + Q++R + + QD++L++L V+RV A+ I+ EL++Q+R++ ++ ++DE TE+MNFVMG+L KLLKTK CQ+WTI+ L+ +L+++V+++I+
Sbjct: 10 LMSGGANDPFHVVKDELVAKLESIELRVGQFNGLLYGPGTTAGSKPFRDCRKALGREIRGAEGQLKDLGLTVDYVERDRGAFSHIDDRELSERRDFVAAARSRVANARDAVGGPRARAKMDADDKAAVAAQQ--GDYGASTDLEMANTDFIHGQRARTQATMREQDDNLEQLDGAVDRVHAMASEIHGELQTQSRMINDMESELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLVVMVMLVIW 256
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A4D9DA67_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA67_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.060e-45 Identity = 100/245 (40.82%), Postives = 157/245 (64.08%), Query Frame = 2
Query: 251 SHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGART-EIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIYV 982
+ DPF+A R+E+ ++++YI+ + E F LL TNTA + +DLR L ++++ A+ Q R+L + V VE NR+ F HIDN E+ +R+ F++ KQ L+ N L+ KNKM+ D R + G G RT + + + +Q+SR + L QDE L+EL T V+RVG A +N+EL +QNR+L L+ +++ E+M+FVMG+L KLLKTK + Q+W I++L+ +LI+L+L+ IYV
Sbjct: 2 AQDPFFAAREELRSRVDYIQTQHENFLRLLQTTNTAPDLSCRDLRDSLCRDIEAAENQCRELEKVVAVVEKNRQRFRHIDNHEIGQRRAFVTKMKQSLVKIWNNLESDYVKNKMSGDRRDPSRSFDG-GAEGHRTGRSGKRANDFIEEQRSRQHLMLCEQDEGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMSFVMGKLSKLLKTKDKYQLWLIIVLTVVLIVLILLTIYV 245
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A836CAK7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.560e-45 Identity = 98/231 (42.42%), Postives = 149/231 (64.50%), Query Frame = 2
Query: 248 ASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLL 940
+S DP++ RD+V+AKI ++ + + ++ T +RD ++L+ ++++++ A QLRDL+RTV+YVE +R SF HID+AEL +RK FL+ K++L +G + K+ ++ ++ YR GDLGA++ E DNTE + DQ+S +ARQD+DL+EL HV+RVG A INEELR Q R+L L++D+ E M VMG + K+LKTK R QIW I+ L
Sbjct: 6 SSGDPYFVARDQVAAKIAAVQAKHAQLNAAIDKARTLTDRDVKELKPVVARDLETAKGQLRDLKRTVDYVEKDRASFPHIDDAELRDRKAFLNAQKKILNAIVADTEGDKLAAKLEKETAAKRDSYRK-GDLGAKSNAEADNTEFIHDQRSNRMAHIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLIVTL 235
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S3ZTE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTE6_9STRA) HSP 1 Score: 160 bits (404), Expect = 5.600e-40 Identity = 97/252 (38.49%), Postives = 156/252 (61.90%), Query Frame = 2
Query: 227 TMSLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQ-NRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
++ L A DPF+ V+DE+ K+ I+ RV F LL + T N F++ ++ +++EV+ A+AQLRDL TVEYVE +R +F HI++AEL++RK F+ +K+ + A +A+ G + + K+ D+++ +A R G A ++E NT + +RV + QDE L++L EL +Q R+L ++D++DE TE+MNFVMG+L KLLKTK CQ+WTI+ L+ +LI++V ++IY
Sbjct: 90 SVPLMASAGGDPFHVVKDELVVKLRSIEGRVATFTTLLYGSGTTHGNPRFREAKKAVAREVRAAEAQLRDLALTVEYVERDRGAFPHINDAELNQRKAFVDKAKRDVASARDAVAGPRARAKIEADEQAALASQR--GAYDASGDLEMQNTAFIHSSHARVAATIQEQDEGLEQLDGAXXXXXXXXXXXXXELSAQARMLDDMEDELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLIVMVFLVIY 339
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A067BS24_SAPPC (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BS24_SAPPC) HSP 1 Score: 156 bits (395), Expect = 9.180e-40 Identity = 92/249 (36.95%), Postives = 151/249 (60.64%), Query Frame = 2
Query: 233 SLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
S AS DP+Y ++++ +K+ I + +R++ LL+ N + +DF L L+KE+ A+ L L +++ +E +R +AHID E+S RK+F+SD++Q L+ + AL KNK+ +D+R +A T D + D++ + + QD+DLDEL T V R+G+ A IN E++SQN +L +D D+D+ TERMNFVMG++ +LLKTK CQ+ I+ L+ +L+I+V ++IY
Sbjct: 9 SAGPSASGDPYYVFKEDLESKVSSIHQKYKRWKHLLDARNASPTKDFGKLTDELAKELATAERSLGFLEQSIRAIEADRTKYAHIDRIEVSSRKSFVSDTRQDLMMMTAALTSDAAKNKVRRDERKALAPL---------TPAPIDRNSILADEKQHQQQIIKEQDKDLDELHTSVSRLGQVAVTINSEIKSQNDMLKDVDADLDDTTERMNFVMGKMSRLLKTKDTCQLGGIIFLTIVLLIMVFLVIY 248
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S4J3Q8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3Q8_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.140e-38 Identity = 100/294 (34.01%), Postives = 178/294 (60.54%), Query Frame = 2
Query: 101 RTVIDISVMAPPTAAKVEKHVKCAGDVCHDVSRRERSSVLSWTMSLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNR-DFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
R +D + ++ P A +E + D D S E SV T SL DPF+ R++++ K++ + + R+ ++++T+TA N + +D ++ L +++K A++ L+DL+ TV VE+NR+ F HI++AEL +R+ F++ S+ + A ++ K K+ D+R + A R G+ GA+++ +R++ V DQ ++ ++ L +QDE L++L V RVG+ A I+EEL QN++L ++D E++ VMG+L K+LKTK++CQI TIL L+ ++ IL ++IY
Sbjct: 58 RDRVDNAALSEPLTANIEH--EDGDDQQWDGSDVESGSVQP-TGSLVTAVEDDPFHVFREDLTRKLDLVDEALARYLRVVDSTDTAVNTAEVKDAKKHLKRQIKNAESALKDLQTTVTMVESNRKKFFHINDAELHDRRKFVTRSRDCISKAKKDMNSDDVKAKILTDERRKAA--RRAGEAGAQSDRDRESASFVADQHAQAQIMLQQQDETLEDLDDAVVRVGQMAGEIHEELGQQNKMLQEMEDXXXXXXEKLGMVMGKLAKMLKTKNKCQIGTILCLTLVVFILFFLVIY 346 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.236.3 >prot_P-littoralis_Contig8.236.3 ID=prot_P-littoralis_Contig8.236.3|Name=mRNA_P-littoralis_Contig8.236.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp MAPPTAAKVEKHVKCAGDVCHDVSRRERSSVLSWTMSLNNEASHDPFYAVback to top mRNA from alignment at P-littoralis_Contig8:999543..1006551- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig8.236.3 ID=mRNA_P-littoralis_Contig8.236.3|Name=mRNA_P-littoralis_Contig8.236.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=7009bp|location=Sequence derived from alignment at P-littoralis_Contig8:999543..1006551- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig8:999543..1006551- >mRNA_P-littoralis_Contig8.236.3 ID=mRNA_P-littoralis_Contig8.236.3|Name=mRNA_P-littoralis_Contig8.236.3|organism=Pylaiella littoralis U1_48|type=CDS|length=861bp|location=Sequence derived from alignment at P-littoralis_Contig8:999543..1006551- (Pylaiella littoralis U1_48)back to top |