mRNA_P-littoralis_Contig8.236.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig8.236.3
Unique NamemRNA_P-littoralis_Contig8.236.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: D7FKW1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI)

HSP 1 Score: 435 bits (1119), Expect = 2.330e-146
Identity = 234/251 (93.23%), Postives = 244/251 (97.21%), Query Frame = 2
Query:  230 MSLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIYV 982
            MSLN+ ASHDPFYAVRDEVSAKIEYIKVR+ERFQDLLNNTNTAQNRDFQDLR+GL+KEVKGADAQLRDLRRTVEYVENNR+SFAHIDNAELSERKTFLSDSKQVLL AS+ALDGQQTK KMAQDDRSEMAKYRS GDLGARTE+ERDNTEH+LD QSRVRMQLARQDEDL+EL THVERVGETATVINEELRSQNRLLTALDDDMDEATE MNFVMGRLGKLLKTKS+CQIWTILLLSFILIILVLMLIYV
Sbjct:    1 MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 251          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S3K6G0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6G0_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.560e-56
Identity = 111/235 (47.23%), Postives = 170/235 (72.34%), Query Frame = 2
Query:  227 TMSLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTI 931
            ++ L + ASHDPFY V+DE+  K+E I  R+ER+++LL   NTA + +F+++++GLS+EVK A+AQ++DL  TVEYVE +R +FAHID+ EL ERK F++ +K  L GA + L G + + K+  D++ ++A  R  G+ GA+T+IE  NT+ + +Q ++ R  +  QDE+L+ L + V+RV   AT I+ EL++Q+RL+  L+++MDE TE+MNFVMG+L KLLKTK  CQ+ TI
Sbjct:    9 SVPLMSAASHDPFYVVKDELVNKLESISSRLERYENLLWKINTAASVEFKEVKKGLSREVKAAEAQIKDLALTVEYVEKDRNAFAHIDDRELDERKKFIATTKNKLSGARDVLTGPKARAKIEADEKQQLAATR--GNYGAKTDIEMANTDFIHNQHAQTRTIMQEQDENLEHLDSAVDRVHRMATEIHGELKTQSRLIGDLENEMDETTEKMNFVMGKLAKLLKTKDTCQLLTI 241          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S2S2M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA)

HSP 1 Score: 200 bits (509), Expect = 6.650e-56
Identity = 110/244 (45.08%), Postives = 167/244 (68.44%), Query Frame = 2
Query:  248 ASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
            A+ DPFY V+DE++AK+  I+ R++ F+ LL  T+TA N+DF+D ++ L +++K A+ QL+DL  TVE+V+ +R  FAHID+ +L +R T+++++KQ L        G   K K+A D R ++ K  +  +LGA +    +NT  +  QQ++ RM + +QDEDL+EL   V+RV + A  IN EL++QNR+L  L+ D+DEATE+MNFVMG+L KLLKTK  CQIWT+++L F     + +LIY
Sbjct:    3 AAQDPFYVVKDELTAKVHTIQKRLQTFKRLLETTDTATNQDFKDSKKALGRDLKAAEKQLKDLTLTVEFVQKDRAQFAHIDDYDLQQRTTYIAETKQALGEIKAYYSGDDVKRKLADDMRKDIMKQPT-SNLGATSSDAMENTHFIQGQQAQQRMIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIY 245          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S2FMQ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.510e-54
Identity = 109/244 (44.67%), Postives = 169/244 (69.26%), Query Frame = 2
Query:  248 ASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
            AS DPFY V+DE+S KI+ I  +  +F +LL++TNTA++ +F+D RR L K++K A+ QLRDL  TV+ V+ +RE FAHID+ EL +R  ++  +++ L    +   G++ K KM  D+R+E+ + + M  LGA    E +NT+ + +QQ++ +M + +QDE+L+EL   V+RV + A  INEEL+ QN++L  L++D+DEA E+MNFVMG++ KLLKTK  CQIWT+++L       V ++IY
Sbjct:    3 ASVDPFYVVKDELSMKIDAITGKTVKFLELLDSTNTAKSPEFKDARRSLGKDLKSAEKQLRDLTFTVDMVQKDREQFAHIDDYELEQRDAYIKKARKNLNEMKSTYQGERVKRKMIADERAEI-ESKPMSSLGATNSDEAENTQFIHEQQAQGQMIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIILVXXXXXXVFLVIY 245          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: F0XYP6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP6_AURAN)

HSP 1 Score: 187 bits (474), Expect = 9.260e-51
Identity = 102/249 (40.96%), Postives = 177/249 (71.08%), Query Frame = 2
Query:  236 LNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNT-AQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
            L +  ++DPF+ V+DE+ AK+E I++RV +F  LL    T A ++ F+D R+ L +E++GA+ QL+DL  TV+YVE +R +F+HID+ ELSER+ F++ ++  +  A +A+ G + + KM  DD++ +A  +  GD GA T++E  NT+ +  Q++R +  +  QD++L++L   V+RV   A+ I+ EL++Q+R++  ++ ++DE TE+MNFVMG+L KLLKTK  CQ+WTI+ L+ +L+++V+++I+
Sbjct:   10 LMSGGANDPFHVVKDELVAKLESIELRVGQFNGLLYGPGTTAGSKPFRDCRKALGREIRGAEGQLKDLGLTVDYVERDRGAFSHIDDRELSERRDFVAAARSRVANARDAVGGPRARAKMDADDKAAVAAQQ--GDYGASTDLEMANTDFIHGQRARTQATMREQDDNLEQLDGAVDRVHAMASEIHGELQTQSRMINDMESELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLVVMVMLVIW 256          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A4D9DA67_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA67_9STRA)

HSP 1 Score: 171 bits (433), Expect = 4.060e-45
Identity = 100/245 (40.82%), Postives = 157/245 (64.08%), Query Frame = 2
Query:  251 SHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGART-EIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIYV 982
            + DPF+A R+E+ ++++YI+ + E F  LL  TNTA +   +DLR  L ++++ A+ Q R+L + V  VE NR+ F HIDN E+ +R+ F++  KQ L+   N L+    KNKM+ D R     +   G  G RT    +   + + +Q+SR  + L  QDE L+EL T V+RVG  A  +N+EL +QNR+L  L+ +++   E+M+FVMG+L KLLKTK + Q+W I++L+ +LI+L+L+ IYV
Sbjct:    2 AQDPFFAAREELRSRVDYIQTQHENFLRLLQTTNTAPDLSCRDLRDSLCRDIEAAENQCRELEKVVAVVEKNRQRFRHIDNHEIGQRRAFVTKMKQSLVKIWNNLESDYVKNKMSGDRRDPSRSFDG-GAEGHRTGRSGKRANDFIEEQRSRQHLMLCEQDEGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMSFVMGKLSKLLKTKDKYQLWLIIVLTVVLIVLILLTIYV 245          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A836CAK7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA)

HSP 1 Score: 171 bits (433), Expect = 4.560e-45
Identity = 98/231 (42.42%), Postives = 149/231 (64.50%), Query Frame = 2
Query:  248 ASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLL 940
            +S DP++  RD+V+AKI  ++ +  +    ++   T  +RD ++L+  ++++++ A  QLRDL+RTV+YVE +R SF HID+AEL +RK FL+  K++L       +G +   K+ ++  ++   YR  GDLGA++  E DNTE + DQ+S     +ARQD+DL+EL  HV+RVG  A  INEELR Q R+L  L++D+    E M  VMG + K+LKTK R QIW I+ L
Sbjct:    6 SSGDPYFVARDQVAAKIAAVQAKHAQLNAAIDKARTLTDRDVKELKPVVARDLETAKGQLRDLKRTVDYVEKDRASFPHIDDAELRDRKAFLNAQKKILNAIVADTEGDKLAAKLEKETAAKRDSYRK-GDLGAKSNAEADNTEFIHDQRSNRMAHIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLIVTL 235          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S3ZTE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTE6_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.600e-40
Identity = 97/252 (38.49%), Postives = 156/252 (61.90%), Query Frame = 2
Query:  227 TMSLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQ-NRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
            ++ L   A  DPF+ V+DE+  K+  I+ RV  F  LL  + T   N  F++ ++ +++EV+ A+AQLRDL  TVEYVE +R +F HI++AEL++RK F+  +K+ +  A +A+ G + + K+  D+++ +A  R  G   A  ++E  NT  +    +RV   +  QDE L++L                EL +Q R+L  ++D++DE TE+MNFVMG+L KLLKTK  CQ+WTI+ L+ +LI++V ++IY
Sbjct:   90 SVPLMASAGGDPFHVVKDELVVKLRSIEGRVATFTTLLYGSGTTHGNPRFREAKKAVAREVRAAEAQLRDLALTVEYVERDRGAFPHINDAELNQRKAFVDKAKRDVASARDAVAGPRARAKIEADEQAALASQR--GAYDASGDLEMQNTAFIHSSHARVAATIQEQDEGLEQLDGAXXXXXXXXXXXXXELSAQARMLDDMEDELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLIVMVFLVIY 339          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A067BS24_SAPPC (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BS24_SAPPC)

HSP 1 Score: 156 bits (395), Expect = 9.180e-40
Identity = 92/249 (36.95%), Postives = 151/249 (60.64%), Query Frame = 2
Query:  233 SLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
            S    AS DP+Y  ++++ +K+  I  + +R++ LL+  N +  +DF  L   L+KE+  A+  L  L +++  +E +R  +AHID  E+S RK+F+SD++Q L+  + AL     KNK+ +D+R  +A           T    D    + D++   +  +  QD+DLDEL T V R+G+ A  IN E++SQN +L  +D D+D+ TERMNFVMG++ +LLKTK  CQ+  I+ L+ +L+I+V ++IY
Sbjct:    9 SAGPSASGDPYYVFKEDLESKVSSIHQKYKRWKHLLDARNASPTKDFGKLTDELAKELATAERSLGFLEQSIRAIEADRTKYAHIDRIEVSSRKSFVSDTRQDLMMMTAALTSDAAKNKVRRDERKALAPL---------TPAPIDRNSILADEKQHQQQIIKEQDKDLDELHTSVSRLGQVAVTINSEIKSQNDMLKDVDADLDDTTERMNFVMGKMSRLLKTKDTCQLGGIIFLTIVLLIMVFLVIY 248          
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Match: A0A7S4J3Q8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3Q8_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.140e-38
Identity = 100/294 (34.01%), Postives = 178/294 (60.54%), Query Frame = 2
Query:  101 RTVIDISVMAPPTAAKVEKHVKCAGDVCHDVSRRERSSVLSWTMSLNNEASHDPFYAVRDEVSAKIEYIKVRVERFQDLLNNTNTAQNR-DFQDLRRGLSKEVKGADAQLRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQQTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLARQDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFVMGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIY 979
            R  +D + ++ P  A +E   +   D   D S  E  SV   T SL      DPF+  R++++ K++ +   + R+  ++++T+TA N  + +D ++ L +++K A++ L+DL+ TV  VE+NR+ F HI++AEL +R+ F++ S+  +  A   ++    K K+  D+R + A  R  G+ GA+++ +R++   V DQ ++ ++ L +QDE L++L   V RVG+ A  I+EEL  QN++L  ++D      E++  VMG+L K+LKTK++CQI TIL L+ ++ IL  ++IY
Sbjct:   58 RDRVDNAALSEPLTANIEH--EDGDDQQWDGSDVESGSVQP-TGSLVTAVEDDPFHVFREDLTRKLDLVDEALARYLRVVDSTDTAVNTAEVKDAKKHLKRQIKNAESALKDLQTTVTMVESNRKKFFHINDAELHDRRKFVTRSRDCISKAKKDMNSDDVKAKILTDERRKAA--RRAGEAGAQSDRDRESASFVADQHAQAQIMLQQQDETLEDLDDAVVRVGQMAGEIHEELGQQNKMLQEMEDXXXXXXEKLGMVMGKLAKMLKTKNKCQIGTILCLTLVVFILFFLVIY 346          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.236.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW1_ECTSI2.330e-14693.23Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A7S3K6G0_9STRA3.560e-5647.23Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2S2M2_9STRA6.650e-5645.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FMQ2_9STRA2.510e-5444.67Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0XYP6_AURAN9.260e-5140.96t-SNARE coiled-coil homology domain-containing pro... [more]
A0A4D9DA67_9STRA4.060e-4540.82t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CAK7_9STRA4.560e-4542.42Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S3ZTE6_9STRA5.600e-4038.49Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A067BS24_SAPPC9.180e-4036.95t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S4J3Q8_9STRA2.140e-3834.01Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:999543..1006551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKW1
Preferred nameSTX6
PFAMsSNARE,Syntaxin-6_N
Model size2107
Max annot lvl2759|Eukaryota
KEGG koko:K02925,ko:K03691,ko:K08498,ko:K08499,ko:K08500
KEGG ReactionR09295
KEGG Pathwayko00514,ko03010,ko04130,map00514,map03010,map04130
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000138,GO:0000139,GO:0000149,GO:0001505,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005794,GO:0005795,GO:0005802,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006897,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007032,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008417,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0016740,GO:0016757,GO:0016758,GO:0017156,GO:0019538,GO:0019905,GO:0022406,GO:0023052,GO:0023061,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030285,GO:0030424,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031201,GO:0031224,GO:0031300,GO:0031301,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0031985,GO:0032456,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0034613,GO:0034645,GO:0036065,GO:0036066,GO:0036211,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045335,GO:0046903,GO:0046907,GO:0046922,GO:0048278,GO:0048284,GO:0048471,GO:0048489,GO:0050789,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055037,GO:0060341,GO:0061024,GO:0061025,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0090161,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098563,GO:0098588,GO:0098657,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099501,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903827
Exons8
Evalue1.84e-151
EggNOG OGsKOG3202@1|root,KOG3202@2759|Eukaryota
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-17_001570.1
EC2.4.1.221
DescriptionSNAP receptor activity
Cds size861
COG categoryU
CAZyGT65,GT68
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01003,ko03011,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.236.3prot_P-littoralis_Contig8.236.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig8 1000665..1006427 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791642.273088-UTR-P-littoralis_Contig8:999542..10006641680791642.273088-UTR-P-littoralis_Contig8:999542..1000664Pylaiella littoralis U1_48UTRP-littoralis_Contig8 999543..1000664 -
1680791642.387985-UTR-P-littoralis_Contig8:1006427..10065511680791642.387985-UTR-P-littoralis_Contig8:1006427..1006551Pylaiella littoralis U1_48UTRP-littoralis_Contig8 1006428..1006551 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791642.2860878-CDS-P-littoralis_Contig8:1000664..10007411680791642.2860878-CDS-P-littoralis_Contig8:1000664..1000741Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1000665..1000741 -
1680791642.2990475-CDS-P-littoralis_Contig8:1001415..10015071680791642.2990475-CDS-P-littoralis_Contig8:1001415..1001507Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1001416..1001507 -
1680791642.3129444-CDS-P-littoralis_Contig8:1001891..10019981680791642.3129444-CDS-P-littoralis_Contig8:1001891..1001998Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1001892..1001998 -
1680791642.3288634-CDS-P-littoralis_Contig8:1002262..10023611680791642.3288634-CDS-P-littoralis_Contig8:1002262..1002361Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1002263..1002361 -
1680791642.3425229-CDS-P-littoralis_Contig8:1002498..10026151680791642.3425229-CDS-P-littoralis_Contig8:1002498..1002615Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1002499..1002615 -
1680791642.3581557-CDS-P-littoralis_Contig8:1003005..10031091680791642.3581557-CDS-P-littoralis_Contig8:1003005..1003109Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1003006..1003109 -
1680791642.3677397-CDS-P-littoralis_Contig8:1003444..10035541680791642.3677397-CDS-P-littoralis_Contig8:1003444..1003554Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1003445..1003554 -
1680791642.378772-CDS-P-littoralis_Contig8:1006272..10064271680791642.378772-CDS-P-littoralis_Contig8:1006272..1006427Pylaiella littoralis U1_48CDSP-littoralis_Contig8 1006273..1006427 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig8.236.3

>prot_P-littoralis_Contig8.236.3 ID=prot_P-littoralis_Contig8.236.3|Name=mRNA_P-littoralis_Contig8.236.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp
MAPPTAAKVEKHVKCAGDVCHDVSRRERSSVLSWTMSLNNEASHDPFYAV
RDEVSAKIEYIKVRVERFQDLLNNTNTAQNRDFQDLRRGLSKEVKGADAQ
LRDLRRTVEYVENNRESFAHIDNAELSERKTFLSDSKQVLLGASNALDGQ
QTKNKMAQDDRSEMAKYRSMGDLGARTEIERDNTEHVLDQQSRVRMQLAR
QDEDLDELATHVERVGETATVINEELRSQNRLLTALDDDMDEATERMNFV
MGRLGKLLKTKSRCQIWTILLLSFILIILVLMLIYV*
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mRNA from alignment at P-littoralis_Contig8:999543..1006551-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig8.236.3 ID=mRNA_P-littoralis_Contig8.236.3|Name=mRNA_P-littoralis_Contig8.236.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=7009bp|location=Sequence derived from alignment at P-littoralis_Contig8:999543..1006551- (Pylaiella littoralis U1_48)
TGACAGAGTTCAACGACGTGCGGGGCAATTTCATTTTTGCGGCGCGAAGA GAAAAATGTGAAATTCAAAAAGGGGCGCATTGATGTGATAAACATACATC CGTACTGTAATCGATATTTCAGTCATGGCGCCCCCAACCGCCGCGAAAGT CGAAAAGCACGTCAAGTGTGCGGGTGATGTTTGCCATGACGTGTCGCGGC GCGAACGCTCTTCTGTACTGAGCTGGACAATGTCGCTCAACAACGAGGCT TCTCACGATCCTTTCTACGCAGTAAGAGAGTGAGTAAACTATTATGACGG TAGTGAACAGTCGGCTGGTAGAAAATGCTCCCTGCCTTTTTTGTTTTCCT TCCGGTTCTGTCCAACATCTTAGTTTTCCTTGATCGGGGAAGACTGCTAT TCTTGGCCTCGGTATCTCATCTCCCAACGATTCACCCGTTGGCTTGGAAG CATGATGCGAGAGGAGAGTTAAGCCTCTCATTATGATGGTCTGCCTGCAG CTGCTTATGGTATCGATTTATCACATGCATTTGTCCTGAACTCGCTCGGA AGTGTCTCGGAACACTACCACAGAGAGAGTACTCTCGGAACACGGAATCA CTGGACTGCCCCCCCTCATCAGTAAAGAAAGCATGCTCCGAGTATACCAA GGTATGCTTTTCTAGATAGCACCAGCAATACGTCACTGCTGTAGGTGCAG AGTGGCACACGATTCTACTACTCTTATCATATGATACATACATATGATAT GTACAAGGTACAAGATACCAGGTACCGTATTTTTATCCCTCTCCCTTCGT ATGTACTTCGAAGTATTTAGCTAAATACCTGGTATGTACCATCAGCATTA GGAACCCGGTGCCAGGTGTAAGTCAGTTTTTGCTCAACAACAATTTTTGC TCAACAACTTGGAATCCATGCGTTTTCTCATTCCCAGCTTCTGCATTCGT ACTGACAGCAGTAGTTGGTGCTGTGTCTTGTGTTCGCATCATGCACCGGA AGCACACAGTTTGCAATTGTGTCTATATAGATACCACTCTGGTCCGGACC ATAGCTGGGATTTCAGGGAAGGAAAAATATCTCGAGATTGACCTCAGAGG TTCGAGACGCGGGTTCGAGCCCCGGCAAAGTCATTTCTTTTGCTAAAACT TTGACCACTTTTTTTTTTTTTCGATTTTTTTTTTGCGCGCAAAGGTTGAA ACTTTATTTTGGTTTTGGTTTTTTCCACCGGTTGAAGACATTGGCAGTGG TAAATCAAAGCAGGCAGAGTGGGTACAAGAGGCCAGGGGGCTACCGACAA CACAATAAAAAATGGTTAAAAAAAGAGTTTTTTTGAAGCCGTACGAGCGT GTTGAAAATGTCAATATTCTCTTACCACAAAAGTCCGGAAAATCGGGGGG GGGCTGATAATGACTCATCCCCGCTGTTAAGGTTGGGATTTCAATTTTGA CTATCCTAGATAGGCTGTAGGATTATTGCCGCGGAGTCTCACAGGCTGAA ATCGTTACCATCATGCTTAACTAGAATCCCACCTATATTCCGGTATTTTC AAATCCCAGCTATATTTCGGACCGAGTGGTATATCATACTTCTGAAATAT TCTGAATTATAATTCGTAAAAGTTCCAACAAAAGACGCCATACACCAGAT ACCATATCGTGGCTCAACGAGAAGCTACCGTCGCTGATTACGGTAACAGC AGTAGTATGGATCATGTGTAAATTGAAAAGTACCATATCTAGTTCCGTAT CATGTGCGTGTTTCATCCCATCCATTCTGGGCACCGGTCTGCACCGTTCG GTATGAAGTGAGTGCACTAGCCGGGGTCTCACAGAAGGAAGGTCACACAC GAGTTTTTGTTTACTCCGAAGTAATTTTTTATTTGTTTTGCCCACACCTT TCCTCCGGTACTTGCATTTGGTTTTTTAACTTTTAACCCTTGTGGTACTG GGCTCTTCACAGGAGGCTGGCCGAGTAGCCTGCCATATTTTTTTTTCATC TGGCAGAATGGTTCCTTTTCGCACAGAGTAGACAGTCCTGAGCAGAACAC AAGTCAATCTCGCCGCTTTCTACAGTGCATGTCCGGTTGCGAAGTGCAGC AGCACATCCCTACAGCACGAACTAAATGCATGCAGGGGCCGCGACAAAGG TCCGCGATGAGCTGGATCGATTGGTCCGGAAAGTAGAAGGGTCGCTCGGC CGTTTTCCTGTCGCCGACAGAGCTGGGAACGTGCATCCTGGTGGTGCTGC TGTGTTCCAGCTGTTTTCTTTTTTCAGTATATACCATATTGTCCATCTCA GATTCACATATTTTCCCTCTTGAAGGTTTTTCTGCATATTCACATCTCTA AGCCCCTCGAGGCGCAGGCCTTCGGCCTCTCTAGCGTACCTAGGCTGCTG CTGCTGCTGCAGCCGCTGTTCGCTTGCTGTGAGGCACTATGCCAATGGCT TCCTCTGCGAAGCACCCACACCATGTCTATCCTGCCCGCGGTTGATGTTG CGGCCTACACGGCGGGAAACAAGACCGTCTGCTCCGACCAACTTGTTCGT TCATCACAGCCTTGCCAGATGGAGAAGATCCCCGCATCCAGTAGTCCGGG CCGAATAATAAAATAAAATAAAACGCTCAATTCTGGTGCACAATCCTACC CTCGCTGAGGCTCAGGAGGGTTAATGCGAGTCGGGTTCAGTAATCTCTTC CCTCTGCTTACTCACGAATTAATCGCCTTCCTCTTGAAAGTCGGAAGTAA ACGCTCTCAGATAGAATCGAATCTGCGACCTTACCGCTAGTAGGAGAACT AGCGAACTACTAGACCACCGGAGCGACCGGTTGTGTGTAGTGTGACAACT ACCATCTATTGTTCCTTCGTATGGTATGATATGCACCATCGTTTTGAGCG AAAAAACACGCACGCCATCCCGAGGTCAAGAGTTCGAAACATTGGCGCGA AATCTGCTTTACTTTATATACTGCCCTTTCTTTACCTTGGACAACAGTGA AGTTTCCGCGAAGATTGAGTACATCAAGGTACGAGTAGAGCGGTTCCAAG ACCTGCTCAACAACACCAATACCGCGCAAAATCGCGACTTTCAAGATCTA AGAAGAGGTGGGTGTGCAGGAGGGTTGGTTTTGTCTAGTTTATTGTTCTC TGTACACACGGCACGAGTCTACGTCTAACTTTTGATAGATTTAAAAGTGT GAGCAAGCTATCACAATCGTCTACTGGTATTTAGCTACGGTAGTTTGTGG GGAAGACCCCTGACATCGAACACACAGGCAGCGTCTCGACCACGGCTATT GGTCGATGCTGTCAAACTTCAGAAAATTCTTCAAAAGTGCCCTTTATTGC TGATTTTACACGGTTCACTGAGAAAATAGCGAATTTTTCGTCAAAAACAG CGCGACAAAAAAAAGTAGCTTTTTGTTTTGTGAAAATTGCAGGCCTTTCC AAGGAGGTCAAGGGTGCAGATGCCCAATTGAGAGACCTACGGAGGACTGT GGAGTACGTCGAGAACAATCGAGAATCATTCGCTCACATCGATAATGTGA GCCAGTTTGCAGCACTTGTCATTCTGCGAGGTTTCTTTCGTGGGAGGATA CATATTTTGTGTGGCACGGGCGCGAAGCAGGTATCTGAGACATTGTGGCC GACTTATGTGGTCTTGAAGCGTTTTGTTTCGTTGAACCATCGCATGTACG GAGCTGTAGCCTTCATACCGTTGTGTCACTGTCTGGGCAGGTCTCGTGTA TTTGCAAAAAAAACGCACAGCCCGAATTTATCATGCGTGTCTGGTTCTTT GACCTGTGGGAGACCTCTCGTGGCTTGTGTGTCGAACCCTTCGCTGTTCC ACGTACTGCACGTGGTAGTGTATGCTGCTGTGTAATAACGCATGTGGACT GACATACTACATGTGGGGGGTGTTCGCTTGTCGCAGGCCGAGCTATCGGA GCGCAAAACGTTCCTCTCCGACTCGAAGCAGGTGCTGCTCGGAGCGAGCA ATGCCCTCGACGGGCAGCAAACCAAGAACAAGATGGCTCAAGACGATCGT TCGGTATGTAAAAGCGTACGTCCATAGTCTCGTACTCCAACTGCTCACGG AAAAAAATTAGTACCTAGTACCGGTGAGCGATTTGTCCATCTTCAAGAAA TAATAGCTTAAACGCCGTTGTCACCCCCTGATCGTGTCAGGAAATGGCGA AATATCGGAGTATGGGGGACTTGGGGGCGCGAACGGAGATCGAACGGGAC AACACCGAGCACGTTCTGGACCAGCAATCACGGGTCCGGGTAAGCAGAGA TATGTGGAAGCAAATAGCGGTAGGACGAGACGACGAAGGCCTTTAGTAAG GGCAAGGGTGCCTGCAACCGACACCTGGATCATAACCCACGCGATCTTGG TTTTTCTCTCGTACACCCTGCGCGATGACGTAGAGCATGGCAGCCTTCAT ATCATACATCTCCATCCACCATCGAGCTATGTACATGTACCAGGTATCAG TCTTTAGCGGCATACACTGATACGGGAATACAACGGGCCCGCTGCGAGTG CAGATGCAGTTGGCGCGACAAGACGAAGATCTCGACGAGCTGGCCACACA CGTAGAGCGGGTAGGCGAGACAGCGACAGTCATCAATGAGGAGCTGAGGA GCCAAAATAGGTGAAGTGACACGGAGCGGGTCTCGGCTCTCCTTCCGATG CCCCACAAGCACATAAGCTAACCAATTCACTTTTCAGCTTTTGCGAGGCA AGGAATTCTTGCATTTTGAAGCGCGTCACTCCTTTGTTTCTCTAAAACAA AAACCCTCCCAGCTGTTTGTGTTTTTTGGAAATAACATACGAAGTATTTC GTTGTTGCGTGCTTTCGTTTTCGCCATAACGTCATGAACCATCATCCGCA TTTCATGTCACGAAGCCGCTGCTGTATTTATTCTGGTGAATTAGCCCACC TTGCCTAGCTGTCCCTGGTCAGCGTTGAATGTCGGTCAACACGTTTCTTA TTTATGTGCTGGTATCCCACATGGCTTTGTGCCCGCTCGTATAGGCTGCT GACGGCGTTGGATGATGACATGGACGAAGCAACAGAACGCATGAACTTCG TGATGGGACGGCTAGGGAAACTTCTCAAGACCAAAAGTGAGTCGTTCAGT TCATACTAGTTCGGACCTGACCAACAGCAACAATCCACCTCATGACATCT CGATTCCACCAGCGCTGCGTTCCGGGTCAATTTGCACACAAGGGCCCCGT CTTTTTTCTTCCCAGCGGGCCGGCAACATATGGCTGCCTGACAACACGAA ATCCCCTGTACATGGTTGAGAGATGGATCTCCAATTTGCTCAGCGACAAT TTCTCCAGCTATCCCTCCGGACGTTATGATGTTTTTCTCTTTCATCTTTG TGAAGTGTTTAGCATGCATGGAGCCATATCTGAAGGAGGGCTTGTCTACG ATAGTGCGAGGCACAGCAAAGACCATTTCATGAGTTTTCAAAACGAACTA TCGAATCTAAACTCGGAAAATACCCCCCCGGCCTATCGCATGTCGGAAAC CCTGTTGGGTTGGAAAATGACAATATTTACGTGCGCGCAGACTGATCTGG TTTCTTCCACGTGGTACAAGCTTTGAAGGACGTTGTAGCTCTCTGCTTGA AGGCGCAGTACCTCGAGTTTTATCGTACAGGCTGAGTCGTGACCGTGGTG GTCTGCGCTTACAGTGTCTGATCTCGTATTGCGACGGTGGCCCGCACAGA GTCGGCCTTCTTTGACATCTACTGCTGTACCGTTTCCATATACTGCTACC CCCTCTACAGGCAGGTGCCAAATCTGGACGATTTTGCTGCTCTCCTTCAT CCTCATCATCCTGGTGCTCATGCTGATATATGTCTAGCTTTGGAGCTAGT GAGGCTTGACGTTCCGTCGTGGCAATCAATGAGAGAGAAGAGCCATGACA TACATTACGAACACACACTAGCGAGGACCCAACACCTACACGAGTACTTG GTAGCGTCTAAACGGTGCTGCATTTTCAGCTCGTTGTAGTGGTGTATCAA GCTCTCTTTGTCTAACGGTTCTGGCACGGAGGAACAGAAGGTCCTCAAAC GTTTTCAATTTTTTTTCCCGACTGCGTTTTTCGCGCTTGAAGGGACTGAG GCTGGTTTGCACAAACCCGGCGTACCTGTTAGTGTGAGTCTACCCGGCGC GTTTCAACAAAACACAAATACGTCGAAGCGAGTACGTACGTAACGTGAAA CCCATCTGTATCAGACTTGGAAAACCCGGGCGCTCGGCTACGAGACAAGA GCCCTGCGTGATCGTGGTTTAACCTCCGCAGGATTCTTAGACGACGCCTC CCCCCTACAAAAAACATGGCTGAGGCACCACAAAAACAAAAAAACTCGCC CCGGGATCCCGTTATTCATTCTTCTTTCGTCAAACAAATTGGACGCCCAC CTTGCGTTCGCATAAAATCGACAGCATTCATCCCGGCGCCGTTGTCGTTG TCAAAATTATAGTTAATCAAGCTTGTTGTGATGCTGTTGGTATTGGTGTG GTGTTCATTTTGTCACCCACCGGCGGTAAGGGTCGTTTAATCATGAACTT TCATGTCAAAATATGCGTTCCGTCCGTCTATAACAGGCGCGGACCTCACA ATGTTGCCTCTTTTTCTGGTGTTGTTTCGCCGCCTGTCTTATGTCATTTA CTCGCCGAGACACCACTTTCACCCATCTGATGATATCTCACCGAAATAGG GATATGACTCGGTGCCGAGTTCACCCCTAGAGAGGTGGGCTCCTTGGCGG TCGGAAATGGCCAAGGTTTGAGGCCGTTGGGGGCCGTACGCAGCGAGGAA AAAGATATGCCAAGTACCCCGCACCCCGGTTCCACTGCTGTGGATCATAT TTGTTGACTTTTCGACCCCCTTTTCAGAGCAGCACAACAGTCATCTTTTG CACTGCATGCTCGCCGAGCAAAATACGAGACTCTCTGAAAACTGCAGGGC GGGCGATAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig8:999543..1006551-

>mRNA_P-littoralis_Contig8.236.3 ID=mRNA_P-littoralis_Contig8.236.3|Name=mRNA_P-littoralis_Contig8.236.3|organism=Pylaiella littoralis U1_48|type=CDS|length=861bp|location=Sequence derived from alignment at P-littoralis_Contig8:999543..1006551- (Pylaiella littoralis U1_48)
ATGGCGCCCCCAACCGCCGCGAAAGTCGAAAAGCACGTCAAGTGTGCGGG
TGATGTTTGCCATGACGTGTCGCGGCGCGAACGCTCTTCTGTACTGAGCT
GGACAATGTCGCTCAACAACGAGGCTTCTCACGATCCTTTCTACGCAGTA
AGAGATGAAGTTTCCGCGAAGATTGAGTACATCAAGGTACGAGTAGAGCG
GTTCCAAGACCTGCTCAACAACACCAATACCGCGCAAAATCGCGACTTTC
AAGATCTAAGAAGAGGCCTTTCCAAGGAGGTCAAGGGTGCAGATGCCCAA
TTGAGAGACCTACGGAGGACTGTGGAGTACGTCGAGAACAATCGAGAATC
ATTCGCTCACATCGATAATGCCGAGCTATCGGAGCGCAAAACGTTCCTCT
CCGACTCGAAGCAGGTGCTGCTCGGAGCGAGCAATGCCCTCGACGGGCAG
CAAACCAAGAACAAGATGGCTCAAGACGATCGTTCGGAAATGGCGAAATA
TCGGAGTATGGGGGACTTGGGGGCGCGAACGGAGATCGAACGGGACAACA
CCGAGCACGTTCTGGACCAGCAATCACGGGTCCGGATGCAGTTGGCGCGA
CAAGACGAAGATCTCGACGAGCTGGCCACACACGTAGAGCGGGTAGGCGA
GACAGCGACAGTCATCAATGAGGAGCTGAGGAGCCAAAATAGGCTGCTGA
CGGCGTTGGATGATGACATGGACGAAGCAACAGAACGCATGAACTTCGTG
ATGGGACGGCTAGGGAAACTTCTCAAGACCAAAAGCAGGTGCCAAATCTG
GACGATTTTGCTGCTCTCCTTCATCCTCATCATCCTGGTGCTCATGCTGA
TATATGTCTAG
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