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Homology
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: D7FKW0_ECTSI (ATG13 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW0_ECTSI) HSP 1 Score: 661 bits (1706), Expect = 7.220e-224 Identity = 425/750 (56.67%), Postives = 494/750 (65.87%), Query Frame = 1
Query: 79 MSTDVSKCNQVVFELLCKVAELVVSAKVCLHQQKRATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDAAPRRELLERWEIMYEAQDAVESKSSQLRHFFKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSLVHSQDDTGFCLYP---GGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPNGSVKVVCHHRRGVDSEAYHTGQTWTPSLTPNMTTSLIQDYVPDEYEGSTAAGMTPTVEINPD-QRLPSTPEDRGSRPKGAVDSHGHHTGVQTQVDCAVGNAPTSSGAHLEADVPDQDIGGADTMHWPSPQLGHGYAERHVHKLVGQGPAPFLTPGPHRGRMLGLSNFTMEPLELGPNAGSESRASP-VPDMAVQQENDDVYEVGDPPRFAAQGHSVDSGGRAQTHGSTEQPPASMMVRTV-GGRHGPGIRGR--IRPYRRNSISESLSTPPVLSLHGTRKTTGPRHGTSTESTPPFSYCDSVSSEASP-LALGQPLVSFSPPFDAAHVGPPHRHDSTFGQESGRVINSSPLFGMRIHHPRTSVP-VLETLPESPFSSKGNPESIQPPAA--TSPGSFSRPFLPSSLGNGNQGPTLA-TDAGASRTDGLPFSVEVRDDDEEVSAENPDAFGGVEGGFHSSSTPSSLFALCSAAPSKSILLMHNPPS-----------LDRDVKDITAPAALYTSTAGTRIPPKFVVRSLEEDLEVFRHFQQE-LEQKR 2253
MS+D SKC QVV+ELLCKVAELVVS++V L Q +R +NSKFSLHVQEL VRNSM+AWENNL++P+GIDIFW E GD APRRELLERWEIMYEAQDA E KS+QLRHFFKRSIILLRTLYS VRLLPAYSVHKRIQSRD SL S+DDTGF LYP GGS GSGL FSA GGE+ G+SGR STSCY FKPL+AP+GSVKV+CH+RRGVDS+AY GQT T + P+MTTSLI DYV DEYE + AA P E+N D +LPSTPED S P GAVD++G H G + + MHWPSP+LGHGYAE+ H QGPAPFLTPGPHRGR LG + MEPLELGPNA +R P P V+QEN+D+ R +AQ S SG H + ++ M+RT GG G RGR +RPYRRNSISESLSTP G+R T G RH T+ E TPPFSY + +ALGQPLVSFSPPF+A HVG HDSTF S RV +S P R VP +LE LPESPF+ + E QPP T+ S SRPFLP L +Q PT A T AG RT+ LPF+ E++DD VSA + GVEGG SS+ PS+L+ALCSAA SKSI L +P S +RD D+ +P A YTSTAG+ +P + +VRSLEEDLE FR FQQE LEQ+R
Sbjct: 1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLIQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGIDIFWVEGG-GDGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSAS--GGEDHAGRSGRK-STSCYTFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTNTVTAAPDMTTSLIPDYVTDEYERNAAASRMPATEVNHDWPKLPSTPEDGASVPDGAVDAYGQHAGNKVSKE------------------------NTSMMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGRPLGRHDVMMEPLELGPNAEIHARGPPHFPAPPVRQENEDLI------RVSAQTLSGASGRTESNH--VDSHCSNGMIRTAEGGEDGVADRGRALMRPYRRNSISESLSTPSGSG--GSRITAGHRHSTAIEYTPPFSYNTTGPDLGERNIALGQPLVSFSPPFNAVHVGQ-RGHDSTF---SIRVHSSGP---------RAPVPTLLEVLPESPFALRK--EGTQPPGVPGTAVASSSRPFLPR-LDCSSQEPTFAATSAGIDRTE-LPFAAELQDDG--VSASVDSSVCGVEGGLDSSAAPSTLYALCSAASSKSIFLA-DPSSEYAEQTAVGFLQERDSNDVPSPGAEYTSTAGS-LPQEVIVRSLEEDLEGFRLFQQEVLEQRR 691
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: A0A329T3P0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T3P0_9STRA) HSP 1 Score: 113 bits (282), Expect = 8.460e-22 Identity = 83/258 (32.17%), Postives = 128/258 (49.61%), Query Frame = 1
Query: 82 STDVSKCNQVVFELLCKVAELVVSAKVCLHQQ---KRATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDAAPRRELLERWEIMYEAQDAVESKSS----------QLRHFFKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSLVHSQDDTGFCLYPGGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPNGSVKVVCHHRRGVDSEAYHTGQTWTPSLTPNMTTSLIQDYVPDEYE 816
ST +K QVV E L K AEL+V ++V H + +R+ ++F+L ++E+ VVR+SM W+ ++ +P+ IDIFW D + LLERW + + A ES S+ QL+ KR +LLR L+SF+R LPA H+ PS++ + ++ +S + +F A + V+TS Y+F P+ P G +KV +RR D Q + P+ +IQDYVP E
Sbjct: 43 STGRAKTEQVVLEFLYKAAELIVQSRVNFHAEPDLRRSNRRARFNLDIEEVQVVRDSMAPWKEDVRLPLAIDIFW------DTGSHKVLLERWSVTFAADG--ESSSAHLGSTQDVIQQLKEVCKRISVLLRALFSFMRQLPA---HRLFTQSYPSMLS------YTMHTAPASDATRAFEA-------------QRVATSGYSFVPIMTPFGLLKVTAIYRRDCDQFTEQQEQAAPSRILPDN--FIIQDYVPGSPE 268
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: A0A3F2RAS5_9STRA (ATG13 domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RAS5_9STRA) HSP 1 Score: 102 bits (255), Expect = 9.270e-21 Identity = 75/235 (31.91%), Postives = 113/235 (48.09%), Query Frame = 1
Query: 82 STDVSKCNQVVFELLCKVAELVVSAKVCLHQQ---KRATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDAAPRRELLERWEIMYEAQDAVESKS---------SQLRHFFKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSLVHSQDDTGFCLYPGGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPNGSVKVVCHHRRGVDSEAYHTGQTW 750
S +K QVV E L K AEL+V ++V + +R ++F+L + E+ +VR++M W+ ++ +P+ IDIFWE GD +R LLERW + + A+D V S + QL+ KR +LLR L+SF+R LPA H+ PS++ Q T A E + V+ S Y+F P+ P G +KV +RR D Q+W
Sbjct: 11 SAGRTKTEQVVLEFLYKAAELIVQSRVNFQAEPGLRRGNRRARFNLDIDEVQMVRDAMAPWKEDVQLPLAIDIFWE----GDG--QRVLLERWSVTF-AEDDVPSNAHLGSTQDVIQQLKEICKRISVLLRALFSFMRQLPA---HRLFVQSYPSMLSYQLRT-------------------APSNEATRAFEAQRVAASGYSFLPIATPFGLLKVAAVYRRDCDQFTEEQEQSW 216
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: H3H0L8_PHYRM (ATG13 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0L8_PHYRM) HSP 1 Score: 105 bits (263), Expect = 1.680e-19 Identity = 81/271 (29.89%), Postives = 132/271 (48.71%), Query Frame = 1
Query: 67 RSCAMSTDVSKCNQVVFELLCKVAELVVSAKVCLHQQ---KRATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDAAPRRELLERWEIMYEAQD--------AVESKSSQLRHFFKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSLVHSQDDTGFCLYPGGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPNGSVKVVCHHRRGVDSEAYHTGQTWTPSLTPNMTTSLIQDYVPDEYEGSTAAGMTPT 846
RS ST +K QVV E L K AEL+V ++V + +R + ++F+L ++E+ +VR +M AW+ ++ +P+ IDIFW+ GD ++ LLERW + + A + + QL+ KR +LLR L+SF+R LPA H+ PSL+ + ++ +S + +F A + V+ S Y+F P+ P G +KV +RR D Q + + +IQDYVP + A+ P+
Sbjct: 34 RSSGTSTGRAKTEQVVLEFLYKAAELIVQSRVNFQAEPDLRRGSRRARFNLDIEEVQMVREAMVAWKEDVRLPLAIDIFWD----GDG--QKVLLERWSVTFAADGEASNTLLGSTQDVIQQLKEVCKRISVLLRALFSFMRQLPA---HRLFAQSYPSLLS------YTMHAAPASDATRAFEA-------------QRVAASGYSFIPIATPYGLLKVAAVYRRDCDQFTERQEQAAPSRIFQDN--FIIQDYVPGSPDLVPASAPVPS 274
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: K3WW66_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW66_GLOUD) HSP 1 Score: 86.7 bits (213), Expect = 8.980e-14 Identity = 84/293 (28.67%), Postives = 130/293 (44.37%), Query Frame = 1
Query: 94 SKCNQVVFELLCKVAELVVSAKVCLHQQ---KRATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDAAPRRELLERWEIMYEAQDAVESKS--------------------SQLRHFFKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSL-VHSQDDTGFCLYPGGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPNGSVKVVCHHRRGVDSEAYHTGQTWTPSLTPNMTTSLIQDYVPDEYEGSTAAG---MTPTVEINPDQRLPSTPED 891
+K +QVV E L K AEL++ ++V + +R ++F+L ++E+ VR++M AW ++ +P+ I I+ + GD +R LLE+W +MY A D ++ S QL+ K+ +LLR LYSF+RLLPA+ + KR S +HS SAF E + V S Y+F P+ P G +K+ +R ++ E + + N +IQDYVP E S PT P LP +D
Sbjct: 2 AKTDQVVLEFLYKAAELIIQSRVNFQSEADHRRGNRRARFNLDIEEVQFVRDAMLAWREDVHLPLTIGIYLDSG--GD--DQRVLLEQWSVMY-APDGGDADSYSGLRRNSSSHLTGAARDVIQQLKEVCKKISVLLRALYSFMRLLPAHRLFKRSYPSTLSYEIHSMS------------------SAFLETHFE------KDVPVSRYSFVPITTPFGFLKISTVYR--LNCEFIREQEAAPAPIFKNN--FIIQDYVPSSPELSAQREDRMSLPTRVQEPSDFLPDADDD 261
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: A0A7S3NNL2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNL2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.270e-13 Identity = 53/142 (37.32%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 82 STDVSKCNQVVFELLCKVAELVVSAKVCLHQQK-RATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDA-----APRRELLERWEIMYEAQDAVESKSS------QLRHFFKRSIILLRTLYSFVRLLPA 471
++ SKC QV+FE + K AE+V+ ++ Q R +F++ V E+DVVR M W +L +P+ I I W E+ + + LLERW+I +E A S + Q+R +KR +ILLRTLYS + LLPA
Sbjct: 4 NSAASKCEQVMFEAVAKAAEIVLLNRIHSPSQLGRRLGRQRFNMDVDEVDVVRGMMEYWRRDLHLPLRILIVWRENNSTEKKNILQGTKPRLLERWDIQFELASASLSGPNEEELLVQVRSVWKRVVILLRTLYSRMLLLPA 145
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: A0A5D6XGH2_9STRA (ATG13 domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGH2_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.750e-11 Identity = 74/262 (28.24%), Postives = 108/262 (41.22%), Query Frame = 1
Query: 97 KCNQVVFELLCKVAELVVSAKVCLHQQKRATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDAAPRRELLERWEIMYEAQDAVESKS----------------------SQLRHFFKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSLVHSQDDTGFCLYPGGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPNGSVKVVCHHRRGVDSEAYHTGQTWTPSLTPNMTTSLIQDYVPDEYE 816
K QVV ELL K AELV F+L ++E VR++M AW ++ +P+ I I+ + G RR LLE+W ++Y D E QL+ K+ +LLRTLY+F+RLLPA+ + +R YP S LS++ A E+ + R Y+F P+ P G++ V +R D+ P+L +IQDYVP E
Sbjct: 40 KTEQVVLELLYKAAELV------------------FNLDIEEAQCVRDAMAAWREDVHLPLAISIYADA--AGAGGRRRVLLEQWSVVYAPLDDGEQPHPLGAARRGASPQPTGGAPRDVIQQLKEVCKKISVLLRTLYAFMRLLPAHRLFRR------------------SYP-----STLSYAIHAASSAERAFE--REDPVGRYSFVPISTPFGTLTVAAVYRLDGDALQDEEEAAAPPALFKEN--FIIQDYVPGSPE 254
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: A0A5J4XLB0_9CHLO (ATG13 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XLB0_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 1.370e-10 Identity = 73/273 (26.74%), Postives = 114/273 (41.76%), Query Frame = 1
Query: 85 TDVSKCNQVVFELLCKVAELVVSA-----KVCLHQQKRATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIF---W---EEHR---------------RGDAAPRRELLERWEIMYEA--QDA-VESKSSQLRHF-----FKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSLVHSQDDTGFCLYPGGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPNGSVKVVCHHRRGVDSEAYHTGQTWTPSLTPNMTTSLIQDYV 801
TD K +Q++ E L K A +V+ + K +HQQ R S F+L++ E+DV W + P I+++ W EE + DA P LLERW +E QD ++ + +QL +KR++++LR+L S+VRLLP Y +++ + S GFCL G S +G + ++ ++F PL+ P G R VD S +P +I DYV
Sbjct: 6 TDRQKTDQIIAECLVKAAHVVLGSRSEPNKPSVHQQAR---KSWFNLNIDEVDVATQVFEHWRKDTGTPAFIEVYLRPWGASEEQSPPLQHSPSQPQDIRLQSDAFPSATLLERWMFHFEPAMQDGNLQRRRAQLARLDPPAVYKRAVVMLRSLTSYVRLLPGYRMYRACKRNSSSPAR----LGFCLLKGHQSNTGAT----------------KATHLRHFSFTPLDTPYGQF------RMEVDYAPAAAVNFLEQSTSPKHQPEIISDYV 249
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: R1FDE6_EMIHU (ATG13 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FDE6_EMIHU) HSP 1 Score: 73.2 bits (178), Expect = 3.070e-10 Identity = 77/254 (30.31%), Postives = 116/254 (45.67%), Query Frame = 1
Query: 88 DVSKCNQVVFELLCKVAELVVSAKVCLHQQKRATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDAA--------PRRELLERWEIMYE-AQDAVESKSSQLRHFFKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSLVHSQDDT--GFCLYPGGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPNGSVKVVCHHRRG--VDSEAYHTGQTWTPSLTPNMTTSLIQDYVPDE 810
+ K VV + K ELV+ A+V L R T N F+L +E+ VR+ + W+ +S P+ +DIF + A P LLERW + YE A A E+ F+KR ++LLR+L +F+RL+PA+ R+ S L H+ D GF + GG G G S A E VS +AF P ++ +G +++ +R A S M+ +LI +Y+P E
Sbjct: 2 EAQKLQLVVRNCVQKTLELVLRARVPLG---RGTPNHWFNLESEEVACVRDRLEGWKQRISQPLQLDIFIDTSSSAVRAAVGAQPNEPNLVLLERWTLRYEPAPHAPEAIGWPT--FYKRFMVLLRSLAAFLRLMPAH----RLASSLGRLGHASDAPALGFRVCIGGPHG-GRSSEASP---EAAPLDFAAGVSPQQHAFSPPDSTHGKLRIAVSYRPPSLFTRTARPAAAAVRCSSDRMMSAALIANYLPTE 242
BLAST of mRNA_P-littoralis_Contig8.235.25 vs. uniprot
Match: A0A2P6NID3_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NID3_9EUKA) HSP 1 Score: 74.7 bits (182), Expect = 5.070e-10 Identity = 41/156 (26.28%), Postives = 86/156 (55.13%), Query Frame = 1
Query: 94 SKCNQVVFELLCKVAELVVSAKVCLHQQK------RATINSKFSLHVQELDVVRNSMRAWENNLSMPVGIDIFWEEHRRGDAAPRRE--LLERWEIMYEAQDAVESKSSQLRHFFKRSIILLRTLYSFVRLLPAYSVHK---RIQSRDPSLVHSQD 528
+K Q+V EL K+ ++++ +++ + QQ + IN F+L ++E++ + + W N+ +P+ I +F+ R P E +LE+W+I E + ++ ++ +KR ++L+R+LYS++R++P YSV + R + P + + D
Sbjct: 14 TKTEQIVRELYVKLTQVILQSRIPMVQQAAKNGTGKVKINKWFNLELEEVENITQELTPWRQNMYIPLCIKVFFNSSRGMAQHPYEERVMLEKWKIQLEPHTG-QRENVEVPVLYKRLVLLVRSLYSYLRVVPTYSVFRDCHRNKLASPKMFYQLD 168
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FKW0 |
| Preferred name | ATG13 |
| PFAMs | ATG13 |
| Model size | 3032 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K08331 |
| KEGG Pathway | ko04136,ko04138,ko04140,ko04211,map04136,map04138,map04140,map04211 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000045,GO:0000407,GO:0000422,GO:0001932,GO:0001934,GO:0002790,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005776,GO:0005829,GO:0006810,GO:0006914,GO:0006996,GO:0007005,GO:0007033,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009306,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016236,GO:0016237,GO:0019207,GO:0019220,GO:0019222,GO:0019887,GO:0019898,GO:0022411,GO:0022607,GO:0030234,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032147,GO:0032258,GO:0032268,GO:0032270,GO:0032940,GO:0032991,GO:0033036,GO:0033365,GO:0033674,GO:0034497,GO:0034613,GO:0034727,GO:0042325,GO:0042327,GO:0042886,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043549,GO:0044085,GO:0044093,GO:0044237,GO:0044248,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044804,GO:0044805,GO:0045184,GO:0045859,GO:0045860,GO:0045937,GO:0046903,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051641,GO:0060255,GO:0061695,GO:0061726,GO:0061919,GO:0065007,GO:0065009,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0072665,GO:0080090,GO:0098772,GO:1902494,GO:1902554,GO:1902911,GO:1903008,GO:1905037,GO:1990234,GO:1990316 |
| Exons | 11 |
| Evalue | 5.55e-228 |
| EggNOG OGs | KOG4573@1|root,KOG4573@2759|Eukaryota |
| Description | process utilizing autophagic mechanism |
| Cds size | 2178 |
| COG category | S |
| BRITE | ko00000,ko00001,ko03029,ko04131 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791642.0774198-UTR-P-littoralis_Contig8:983680..983758 | 1680791642.0774198-UTR-P-littoralis_Contig8:983680..983758 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 983681..983758 + |
| 1680791642.2361953-UTR-P-littoralis_Contig8:998516..999292 | 1680791642.2361953-UTR-P-littoralis_Contig8:998516..999292 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 998517..999292 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791642.0934556-CDS-P-littoralis_Contig8:983758..983881 | 1680791642.0934556-CDS-P-littoralis_Contig8:983758..983881 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 983759..983881 + |
| 1680791642.1078584-CDS-P-littoralis_Contig8:985063..985221 | 1680791642.1078584-CDS-P-littoralis_Contig8:985063..985221 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 985064..985221 + |
| 1680791642.1257753-CDS-P-littoralis_Contig8:991950..992068 | 1680791642.1257753-CDS-P-littoralis_Contig8:991950..992068 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 991951..992068 + |
| 1680791642.1372874-CDS-P-littoralis_Contig8:992429..992678 | 1680791642.1372874-CDS-P-littoralis_Contig8:992429..992678 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 992430..992678 + |
| 1680791642.1474748-CDS-P-littoralis_Contig8:993059..993496 | 1680791642.1474748-CDS-P-littoralis_Contig8:993059..993496 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 993060..993496 + |
| 1680791642.1572082-CDS-P-littoralis_Contig8:994532..994728 | 1680791642.1572082-CDS-P-littoralis_Contig8:994532..994728 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 994533..994728 + |
| 1680791642.1755478-CDS-P-littoralis_Contig8:994987..995113 | 1680791642.1755478-CDS-P-littoralis_Contig8:994987..995113 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 994988..995113 + |
| 1680791642.1869776-CDS-P-littoralis_Contig8:995687..996128 | 1680791642.1869776-CDS-P-littoralis_Contig8:995687..996128 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 995688..996128 + |
| 1680791642.20069-CDS-P-littoralis_Contig8:996394..996540 | 1680791642.20069-CDS-P-littoralis_Contig8:996394..996540 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 996395..996540 + |
| 1680791642.21483-CDS-P-littoralis_Contig8:997797..997915 | 1680791642.21483-CDS-P-littoralis_Contig8:997797..997915 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 997798..997915 + |
| 1680791642.2260623-CDS-P-littoralis_Contig8:998450..998516 | 1680791642.2260623-CDS-P-littoralis_Contig8:998450..998516 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 998451..998516 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.235.25 >prot_P-littoralis_Contig8.235.25 ID=prot_P-littoralis_Contig8.235.25|Name=mRNA_P-littoralis_Contig8.235.25|organism=Pylaiella littoralis U1_48|type=polypeptide|length=726bp
MSTDVSKCNQVVFELLCKVAELVVSAKVCLHQQKRATINSKFSLHVQELD
VVRNSMRAWENNLSMPVGIDIFWEEHRRGDAAPRRELLERWEIMYEAQDA
VESKSSQLRHFFKRSIILLRTLYSFVRLLPAYSVHKRIQSRDPSLVHSQD
DTGFCLYPGGSSGSGLSFSAFAGGGEEQVGQSGRSVSTSCYAFKPLEAPN
GSVKVVCHHRRGVDSEAYHTGQTWTPSLTPNMTTSLIQDYVPDEYEGSTA
AGMTPTVEINPDQRLPSTPEDRGSRPKGAVDSHGHHTGVQTQVDCAVGNA
PTSSGAHLEADVPDQDIGGADTMHWPSPQLGHGYAERHVHKLVGQGPAPF
LTPGPHRGRMLGLSNFTMEPLELGPNAGSESRASPVPDMAVQQENDDVYE
VGDPPRFAAQGHSVDSGGRAQTHGSTEQPPASMMVRTVGGRHGPGIRGRI
RPYRRNSISESLSTPPVLSLHGTRKTTGPRHGTSTESTPPFSYCDSVSSE
ASPLALGQPLVSFSPPFDAAHVGPPHRHDSTFGQESGRVINSSPLFGMRI
HHPRTSVPVLETLPESPFSSKGNPESIQPPAATSPGSFSRPFLPSSLGNG
NQGPTLATDAGASRTDGLPFSVEVRDDDEEVSAENPDAFGGVEGGFHSSS
TPSSLFALCSAAPSKSILLMHNPPSLDRDVKDITAPAALYTSTAGTRIPP
KFVVRSLEEDLEVFRHFQQELEQKR* back to topmRNA from alignment at P-littoralis_Contig8:983681..999292+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig8.235.25 ID=mRNA_P-littoralis_Contig8.235.25|Name=mRNA_P-littoralis_Contig8.235.25|organism=Pylaiella littoralis U1_48|type=mRNA|length=15612bp|location=Sequence derived from alignment at P-littoralis_Contig8:983681..999292+ (Pylaiella littoralis U1_48)
CGTCGGACACGAACCTGTTTACGGCAGAGGCTGTTGACAGAGAGACGAGA
GAGACTTTTGTTTCGACGAAGCTGCGCGATGAGCACTGATGTGTCCAAGT
GCAACCAGGTCGTTTTTGAACTTTTGTGTAAGGTGGCGGAGCTTGTTGTA
TCAGCAAAGGTCTGTCTCCATCAACAGAAACGGGCAACAATCAACAGCAA
GGTAAAGTGTTGCGTGCGTGTGTGCGTTATACGACATACCTCGCGGCCAT
GACGCCCCACGTGTAGAGCGACTGTTTATTCTTGGCATTCGCTGGATATG
CGAGGAGAGCAGTAAACCACCAGCAGATACTCGTATAGAGTAGAACACAG
CGTAGTTGGTTCTCTGTGGATCGTTGTGACACTCAACCATGTTTCATTTT
CTGAAAGTGTGTTGGAATTAATCGACCCTATTCAACCCCACTAAATTTCC
AAAAACCATCCTTTCTTTATCCAGTACAAATATAGCTATCGACCTTCCCG
CGTGAATGAAGCCGATGTTTCTCAGGATATCAGTCAGTGTAACACATGAT
ATAGAGGCGACGTGCGTGTTGGCAACCTTCAGAGCTTTCGATGGGGCTGA
GATATCGGTGGTCGAAGGTGTTTGGTGCAGCAGCCCAAAAACCGTCCGCA
TCTCAGCCCGAAACCAAACATATTGCTGTACGTGATCTTCCACTGCTGTA
CTCGCCGCCATGGGCCCCGATCTCCTGAACTGAGTGTTATCCTAACCAGC
AACGTGGTATGAGCTACGCTGCAGACCCATAGACCCAAAGTTCAGGAGAT
TTGGGCCCATGGGGGTGATTACAGCAGTGGAAGATCATTCGAGGTGTCTG
ATCTCGGGCTGAGATTCGGACAGAATCCCGACTGCTGTACAACATATTTC
AACCACCTATAGCACAGCCCCAGCAGAAGGTTTGAGCTAGCCAACACACA
TGTCGCTTCTACGTGATGTTCCCTACTGATTTCATTGGAAACATCGGCTT
ACTGTAATTCACACCACAGGTCTTATTCGAGCGCCTCTCGTGTTTACTGT
TTTGTCTTGAATTTAGATAGGGGGAGCTTATCATCTTGGATTTAGAAGTC
GCAAAATTAATACGGAGTTCTAACTTCACAATATTTGTGTCGCAATAACG
CCCCAACCACCACCTTCCAGCCGTTATTTTGACCCCCAACCCTTTTCTAC
TTGTCTGATGGCCCTGCTTCGTGACGTTTCGGGTACTCTAGCAGCATTCC
AGGTTTCAGCAGTATTGGATTTCATTGAATAGGGTCCTTTAAACGTGCGC
AGCTGGTGCACCATTTAATCCAGCATCACTTCATTCGTGCATTGCTGTCG
CCCCCCGACGATCGCTGCGGCGTCAACAAGCAGTTTTCTTTGCATGTACA
AGAGCTTGATGTCGTCAGAAACTCCATGAGGGCGTGGGAAAACAACCTCT
CCATGCCCGTTGGCATCGATATATTTTGGGAGGAGCACAGACGGGGAGAC
GCGGCCCCGCGAAGGGAGCTACTGGAGCGGTGGGAGATCATGTACGTCGG
AAAACTATTTCCTTGACTGACTTGCGTACTGTAAACTTATGATATGATAC
ATGCCTGGTATGGTACAATCCGCGTAATCGCTTGATAAGGGAGCACAATA
CCTACATAATTTCGAAACGGAATAAGCGTCGATGAATCGCGTTGTACGTA
AATTATCCCTTCTCTACAGTGTAAGGCTAGGGACATGGAATGTCTTTCGG
GAGCCATCAAATGCAAAATGTTTCTGCGATATGCAAACTGCAAACGCATC
AAGCATCACTGCATTTCTGCAAGACACGAAACGCCTCCGGAATCTACACA
AGAACCCGCCAGCACTCAATACTCAACACCAATTGGAAACGCAAAGGCGA
TGGTGTTTGATAGATTTGACCCTATCGAAGATTTGACCCGATCAAACAGA
AATGGAGGATGACTCGTGTTTGCCCTCCTATTGGGCTGGGTCTTCACCGG
AAATCAAAAATCGAAACAAAAGTTCAAAACTAAGAAGACGGGAAGATCCG
GCCCAATTCTGGTCTTGATTTCCATGTGTCTTCACCAAAAATCCCGAAAT
CGAAACCAGAATTGAACAACGGAGCATTCGCGGAATTCGAACAGCCCTTT
GGTTCCTACAAACAAAAGCTGTGGACGTGGCGACAGCAACAACAGCAGCA
ATCCGATCGCGCATGCACGGCAGCATGGGTTGTGTGTGTGTACGTATGGT
GACGAGCAGCGGCTTGCACGGAACACCAACTTGGGGAGCTAACGACTGGG
TTCCCTTCGTCTTGTATCGCGAAAAAAAATGACGTTTTCGTCTCACACCT
CAGCAGTGCTGCTGCCGCTGCTGCTTTAGCGCGCAACAGCTAAATGTGCG
TTTAGCTACATCTGCTACGTATCTCTTCTGTTCTTGTGCTCTCTCGAAAT
GCTTTTTGATGTCAACTGCCGTTGTTGTGGTGGTGGGGTATGTTGTTGTA
CGTTTATCTCACTTCAGCAGCAGTGAGATATCTATGCATGCCTGTGCGGC
TTGTAGTAGTGGTGCGGTGCCCTACTCTCCTGCTGCTTGCTGCTGCTGCT
TTATTGTCAAGTTGTTGATTCTCACATTAGCTCACTACCGCCGCAGTCTA
GCCCGTGGTCACAAACCAGGCACATATCGTGCTAGGAGGAAAAATAAAAA
ATAAAATAAATGGACTATGATCACCCACAGTCAAATCAGATAGGGTACCG
TTGGGGTACCATCTGTGGTGGCCAAAGTACCAAACAAAATACAGAAAAAG
AAATGACAGGTTCGAAAGACAAAACAAAAAGTGAAAACAGTACAAACAAA
AACAAAAACAAGACAAGGCTCAACCATAACCATATACTTCGAAGTACTTC
GTACATCGGACCAGGGCCCAGGGCCATGACAGACCAAGGCAAAGGCAAAC
CAGGGCGATGGTCCAGTAACTACATGATCAATAGACGAAAGACAAAATAA
AAAAGAAGATACAGGGAGGGCACAAAGACTGAGGGAGTGTACTCGTACAC
AAACACAAAAAGCAGGCAGCCAAACAAAGAGGAAGCAGGGGAACGAAAAG
GGAAAAGAAAAAAAGAGACAAAGAGGAACAAAATACAAACATGCAGAGTG
CAGAGGGAAGACCGGAAGTACCGGAAGTCGGGGGGGGGGGGAGATAAAGA
AAGAAATAAAAGGCATGCATTCAATCGCAAACATGTCTTGCCATGAGGTC
TGCCTGTTCACGCTTGCTCTCCTCAGTCGCACTCATGCCTCCTGCTGCTG
GCACCGCCGTACCCAGTTGTTTCTGCTCCACATCTTTGGTAGCAGCTACA
CCACCATTCCGCCCTACAGGTTTTCCACTCCGGTCACCCCGTAGCTTGGC
TTTGAGCTGCTTCTTCTGCCGTGCAACTCCAACCCCACTACCCCGCTGCC
CTTGTGCCCCCCCGTACTCCTCTCGTTTATCCCCGCCATCCGTTCTCCCT
CTTTTGGCCAAGGCCTGCCCCTCAGCCGCGTCCCTCTCCCTTTTCAGTCG
ACGTGTCTCTGATAAGTCTCCCTCTTTCTTGAGCCACTCGTCCGTGAACC
GCCGCGCACCCTCGTCGATCCTGTCGTACCACTCGTCAGCTCTCTTGGCA
CGTGCCCTCTTTTTCGTCGATAGCGATGAGGTCCCCCTGCATTCGCCTCA
GCCAGTCAAACTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGCAATTCT
CCCAAAAGAGCAGTTTTCGGGGGTCTCTCGTCTCTCATGCGCGCAACGAA
TCCTGCGAAGCACAGTCGCCGCTTGCGCACGGTGGCCTCAACGCTCTCGT
CGCAACCCGCGGTGATCAGGGCTTTGGCGTAGGAGAGGGGTCGGTCTGTT
CTCTCCCTCTTTTTCCATCCGATGCAGCGAAGGAGGAAGAAGTGGTGGGC
TGACCGAAGCTTGCGGTACTCCGCTGGCTTCAGATTCCATGTGACACACC
CGTAGAGTAGAGTAGGGTCTCCACGACTTCAGCTTGGAGGAGTCGTACTT
TAAGTCGAAGAGGGGCCCCCGGGCGGTCGTACATTGCCTGGCTGTTGCGC
CGGAAGCAGGCGTGCGCTCGCTGCACTCGGTGGTTAATCTCGCCCTCAAT
GCTACCGTCCTCACAAATCTTACCCCCGAGATACCAAAGTATTTCTTCTG
CTTGAAGACCATCCCGGCAGCGTCGATCGTGAACGAGCACGCCTCCATCC
CTTTCGCGAGCATACACATGGTCTCCGTCTTGGGTTCTGACACCAACAGC
CCAAACCTCCCGGCCACACGTACGATGATCGACATCATCTTCTCAAGGCT
CCCAGGTGATTGAGATACAACACAGGCGTCGTCGGCGTAGAGCATACTCC
AGAAAGACTTCACTGCCTCCACCAGTCGGGCGTTCCTCCCCTTCCCCTTC
GTCACCTTCCTCTTGATCTTGGCCATGTCCGCCATCACCTCCGCGTCCTT
GCTGATCTCGGCAAAGGCCACCATGAGCATCGCAGCAAAGAAAAGGTTGA
ACAGCAGGGGTGCCAGATTGCATCCCTGTCGGAGTCCCTGTCCCACATCA
AACCAGTCGGAGCACCTCCCGTCGTCCATCCGTACGCATGCTCTCATTCC
GTCGTGGAATTGGCGAATGACCGCAAGCATCTTGGGGGGCACTCCGAGCC
GCTTGAGCACCGACCACAGTAGTTCCCGGTCCACGGAGTTGTAGGCTTTC
GTGAGATCGAAAAAGCAGGCGTACAGTGGGGTTGATTTCTTCCGCGCAAG
CTCCTGTAGGCGTCGAACCACGAACATCATGTCAACCGTTGAGCGGTTTG
GTCGGAAACCGCTCTGTTCCTTCGGCAGAATGCCCTCTCTTTCGCAGTAG
TCGCTTAGCCGGGTGGCGACCAGCTTCAAGAGCACCTTGCCAGCGTGGGC
CACAAGGGAGGTGCCTCGGTAATTGCCGCATCCCGTCTTGTCCTTATAAC
ATGTGTGTACGTACGTGCGCATGTATGTGTTGCTCCGCTTCAATCCAAAC
AGTAGTACACCAGCTGTGGACACAGCAGAAGCACCTGCCCCAGACCATCG
ATAGACCAGGAATGCACAATATCGTAATAATTTATGGTACGTTTCGCCAA
CTCGTATTAAATGCAATTTCATTTTTTTGAAATACGAGTTGGGAATCGGA
ACACATATTACAAGACGGAAAGATCCGCGGTCGGTCGCAGGGCGGGAGCC
CACTTCTCCTCGCTTTACCCAGTCACAGGTTGTGTTCTGTGGACCTTCTG
GTTTTATCATGACTTTTGATTTCGATTTTGGTTTTTGATTTCCGGTCAAG
ACCCAGCCTTGTACATTTTATGTTATTCTCGGGGATAGTCCGTGAGACCG
ATTCACTGCCGGGTGTTTCAAGTAAGGAGGGTCTTCGCTGAACGGGACGG
TATTTTTGGCCCTGATTTGGGGCTGTTTCTGGCTGCTGGTGAGTACCACA
CCAATGTGCCGGTAGCCCTCGGCAGGACCCGAAGGCGAAGGTGGTGTCCA
CGCTCGTCATCTTTTAGTCCAGCATGTCATGTTTTTTCAGGGATAGCTTG
ATATCCGGGGCTGATCCGTGTACAGGCGTACATTTCGCTTGCCCTCCGCG
CCACCACAGACTGCTCGTCACCGAGATGAGACTAGTCGTCAAGGATGCAA
AAACAGAAACATATCCATATCTCTTGGTGTGTCGTGCAACAATCCGCTTC
CCAATATGTGGCCTGTGCGCCGAGCATTGCACAATCTACGGAGTTGAAAA
ATTCCAGCGGGCGGCCTGTATGGAGGGTAGGTGTATGACGAAGGTGGAGG
TAGACTTGTTCTAGTTCCCAACGTCACTTTTTTCTTTCGCTTCTTTATTT
TTCCTTTCACAACCAGCAATATATCATGAAAACATCCCCCAGACAAGCCG
CCCGCTGGAATTTTCAACCCCCTAGATTCTACAATGCTCGGCGCACAGGC
CACAGATTGGGAAGTTGCACGACACACCTATGATGTTGACATTTCGCTGT
TTGAATATTTGACGGCTACAGTAGTGGCGCGGATGGCATGCGAAACCAAA
ACGGATCAGCCCCGGATATCGCGCGATGAAATAAAATGATATTCCGGACT
TCAATATGGCAAGCGTCGACCCCTTCTTCGCCTGAAGGCTTTCTTGGGGT
AGCATTGAGGGCTATGATATTAGTACTTTCCATGCGACTGCGAGACCAGC
CCGTTGTGGTGTAGTGCTCGTCAGCAGCCCAGAAACAGCCCCGAAACAGG
ACAAAAATTATCGTCCCCGTCTGGCACGAAATACTTCCTTATTTTGAACA
CCGGCATTTAGTCGGCACCACAGGCTTTCAGTAAGTCAGCCTCCAATGCT
TATTTGATAAGCTCATTTACCATATAGTATAGGGGCAAAATATTACTTCG
TATGTTTCATGAACTGCCGACACACAGAAAAGATAAACGCAGACATTACA
CAAACACAGCAGACGAAGGTCGTAGCGGCCGATGTAGGGTAGCACCAGCG
GCAACACGCAACATACACACACAGAGCACAACACCGCGGTAGCATGAAAG
TAGCACATAGGTACAAAAATGCGCATCGCGCGCACAATTTGCTCTCTCTC
CCCTCTCTCGTCTGCTCGCGTACGTGGCAGCAGAAGAGGCACACACGCGC
ACAAGCACATCATTTACGCACGCAGTTACTACTTCCATCTGAAATGTGTG
TGTCCGGTTACCGCTCTCTGGCGTGCGAGCTATCTGTGATACACGCACGC
TCCTCTATCTCGCTCTCCTCCTCTGTGTTCCGTGTGCATCTTATTAGGGC
GTGTCCGTGTGCTTGTACGTATATTATTCTACTACTACGACTGGGCTGTG
TACGACTATACTTTTGATATTTGTTTCGGCTGTGCTGTGCTGTGTTGGTG
TGTTGCGTGTTGTCGCCGGTTCTATCCCACATAGGCCGCTGCGACCCTCG
CCTCTTCTGCTGTTTGTGTCTTGCTTGCCGTTTGTATTTTCTATAATCCA
TAACATTTTGCTACATGCTGGTTCACGCACGAAACACCAAATTTAGTCAA
CGCACCGTCCCGAATGCAATAGACCACCGATCACAACAAAATGGTACTAA
ACTGACCGCTGTCAGTAGATGAAGACCGTGACGTGCTCATATTTTTGTAA
AAGGCCTATCAGTGGAACTAGTGGACGAAATGTGCCATATCCACAGAATG
ACGTTGTATAACACCCCCCCCCCCAAATTTTAAAATATCAGGCTTTCCAC
TCTAAATGCTAGATGAATAAAATTCGAGATATAAGAAGTATCTTTTTTTT
ACAAATTTATGGTCTCTTTGGGTTATCAGGACGGTGCCCAAAAAACATTT
TTCGAAACTCTACAAATTGACGTAGTTTTGCCAATATTAGGGTAAATGCT
CTTAAAAACGGCCGATTCTGGTCTTTATCCTAGTGAGGAGGTGTTTTCCA
GTACTTGACCGCACGTAAGTGCGTTTTCTCACGCGGTTTTTTCGAGTTAG
ACTCTGAAACCTTTGCCCGCATGTTCGTCATGTCAATACAAAACTTTTTG
CTGTCGGGGTGCAGCGATTTTTATTTCTTTTCAACCGAATTTCTGGGGTC
CCAAATCGACAAATGCATACAATAATTACCATAATACTAATATAACTATT
TAAAAAAAAAGTCGTTGCACCCCGACAGTAGAAAGCTTCGTATTGACATA
ACGAACATGCGTGCAAAGTTTCAGTGCCTAACTCGAAAAAACCGCGTGAG
AAAACGATGTTGACTAAATTTGGTGTTTCTTGCGTGAACCACCCTGTATG
ATGTTTCCAAATAATGTTGGGTGTTTGCTGAGAGGTATCGCTTGTGTAGG
TTCCGGAGTCGTTTCGTGTACTGTACTGCAGAAATACGCCTGATACGTTC
TGCATTATCAGGGGCTGCCCGGTATTTCTTGCGTTTTTCTCCCGCATTTT
CGAAGTTTTGCGACACGGATACTTGGTTTGGATGCTGAGAGGACGTTTGG
ATGTATCTGCTGTACGCTCACTATCCAGGTCGCTGCATCACCATGAAAGG
ACAGAAAAACGCTCTAATTTTTCCATCCAACCTGTCTACAACGTGTGGAC
CATTGCCGTATCGTATGGGAGCCAAAACAAAATAAATCCAAGATGTTTGC
TCGTTGTGTCGCTAGCATTGAGGTTCGACTTGTTTCGAATCTGCGAACCC
TCGCTCGGTTGTCGTGGCAGGTACGAGGCTCAAGACGCCGTAGAGAGCAA
ATCTTCCCAGCTCAGGCATTTCTTCAAGCGATCTATCATTCTTCTTCGTA
CGCTCTACTCTTTCGTGCGGTTACTGCCTGCTTACAGCGTGAGTCGACAG
GAACAGAAAATTGGTATTGGCGGTCATGGTTGTGACAGAATGGCCGCATG
TGTTGTGTTGTGTTGTGTTGTCTTTAAAAGTATTGAAGAAAACCGGTGTT
CGTGATTCATGTGAAGTTTGCGATCGAATCATTTTCTAACCTCTCTAACA
GGCATTTGGGAGCACGTGCATGGGCAACCTTATCAAAGAGCTACCCTCGC
TCTGTGTGTCCCCTATCGGTGGGTAGAACAAGCGAAGATACTGCTTTCGG
CGATGTACGCCGAGGCAAGACATGTTGTTTTTTCCTTGGAAGCCGTATCA
AAGCAGCGAGAACAATGCAAAGCGCTCCTTTCATCCTGTTTGGACCCAGG
TTCACAAGCGGATTCAAAGCAGGGACCCGTCGTTGGTACATTCACAGGAC
GACACGGGTTTTTGCCTTTATCCCGGAGGTAGCAGTGGCTCTGGGCTGAG
CTTTAGTGCCTTTGCCGGTGGGGGCGAAGAGCAGGTAGGTCAAAGCGGCC
GGAGCGTCTCGACTAGCTGCTACGCCTTCAAGCCTTTAGAAGCTCCAAAC
GGGTCGGTAAAAGTCGTCTGTCATCACCGGCGAGGTGTGGACTCTGAGGT
GCGCCTTCTTATTCCCTTTAACTGGTAGCATGATCTGAGTGGCGAACAGT
TTGAAACGAAACGCAGGGTGCAAGAAGCTCATCTGAATATTTTAAACGAT
GGGCTTTATAATTTCCATTCCACGCGTGACTCACACCAGATCTTGAAAAT
AAATTCCAAGGAATATCACAGTTCCACCTAACTTTGAGGTTCCGTTGTGA
GACAGAGGCAACAAGTTCCAAGGAAAACTTACGATGCATGAGTGCGACAC
ATCAAGTGGAACAATTGGTTGCCTCTTTCCTTTGCTCTGACCGTCAGGTG
TGCGTGCGTGAACATTTTAGACAAGCTCTCAATGTTCTCACAACTTTGTC
GCGCCGGTGTCTTGTGTATTTTCTTCTAGGCCTATCATACTGGACAAACC
TGGACTCCAAGTCTCACACCCAATATGACGACTTCTCTTATACAAGATTA
CGTCCCTGACGAGTATGAGGGAAGTACAGCAGCTGGGATGACGCCGACTG
TGGAAATAAATCCCGACCAAAGGCTGCCCAGCACACCAGAAGACCGAGGC
TCGAGGCCGAAGGGTGCCGTTGATTCGCATGGCCACCACACGGGGGTGCA
AACACAAGTAGATTGTGCTGTGGGGAATGCGCCCACGAGCTCTGGAGCAC
ATTTGGAGGCTGACGTACCCGACCAAGATATTGGAGGGGCTGACACGATG
CATTGGCCATCTCCGCAGTTGGGGCACGGGTACGCGGAGAGGCACGTGCA
CAAGCTAGTTGGACAAGGTCCAGCGCCATTTTTGACACCAGGACCGCATC
GTGGACGAATGCTTGGGTGAGGAGCAGAGTCTGACCGAATGTCAGACTGT
TTTCATGTGGTATTTTTGGCGCGCGAGAAACTCGCTTGAACCAAAGTTGT
GTTGGTGCCCCGTGCCTACCAAACAGCGCAATCCGTAAGCACGCAGTTTG
GGGACCCCTGCGAACCTAAAGCCAATTTTGGAATTCGGCGAAGAGCACCC
AAAACGTCACGAGATAGGGCCATCAGACCAATAGAACAGGGATGGGGGCC
GAAGCAACGGTTGGAAGATGGTGGTTTGGGCGTTATGGCGACACGAATGT
TGTCTTTCAAAACTCCGTTTCTTTTCGACGACTCTCAATCCAAGATGACG
AATCTCCCTTGACTCTAAATCCAAGACAAACCAGTGAGCACGAAAAGGCG
CTCAGCCAAGACCTGTGGTATGAGTTAAGCCGGGGTTACGAATGACATCA
GTAGAATGTATCGCGTAGAGACAACGTGCGTGTCGGCACCCGTAAATGTT
ATGCTGGGGCCGTGCAATCGGTGGTGGAAGACATGTGGTACAGTAGTCGA
GAAACTGTCTGCATTTCGCCCCGAAATCAGACATCCTACGTGATCTTCTA
CTGATGTACTCGCCGCCATGGCCCCAATCTCAACTTCGGGTCTACAGCAG
TAGCTCACGCCTCTTGCTGCCTCGGACAACGCATAGTTGAAGAGATTGGA
GTCCATGGCGGCGAGTACAGCAGGGGAAGATCATGTATGATGTTTAACTT
GGGGTCGAAATGCGGACAGCTTCTGGTCTGCTGTACCAAACATCTTCTAC
CACCGATAGCACAGCCCTGGCAGGAGATCTGAGTGTGCCAACACATACGT
CGCCTCTACATAATGCCTGATATAATTCGTAACGGGCAGCTCAACTTACA
AGAGGAGGTCGATTTCTATTCATCGGTGATTTTCTTTTTTGGAAAAAGAC
TCGAACTTTTTTCTGCTTGTTACATAGGTGACAGTGGTCACTTCTTTCAC
CAACCTCTATATGCACGGCGTTTGTGTTTGAACGTTTGTTTGCTGCACCT
AGCTTGAGTAATTTCACGATGGAGCCGCTGGAGTTGGGGCCAAACGCCGG
AAGCGAATCTCGAGCCTCCCCAGTGCCAGATATGGCCGTGCAGCAGGAAA
ATGACGATGTGTATGAAGTTGGAGACCCACCACGTTTTGCTGCACAAGGT
CATTCGGTCGACAGCGGAGGGCGGGCACAGACACATGGCAGCACGGAGGT
ATGGGCGTTTTTTTCCAGCCGTTTGTGTGATGCGGCGCCCAAGTCCGCTG
CGAAGTTTGTGTTGCACCACGTCCAAAACGCTGACGCCTGATATTTCAGC
AATATTTTGCGACGCGCGACACAGTACTAGCACTCAAATAAAATTCAGTT
CCTACCTCGATGGTGTTTATTTCGTGGGGCACGAGGGTTAGGCCTGACTA
TATTTTTCTCCTGACACCGCATCCTTCCGGCTGCTGGCTGTTCGCCTGAA
TGGACAGCAGCCCCCCGCGTCCATGATGGTTCGGACAGTGGGAGGAAGGC
ACGGACCTGGTATTCGGGGCAGGATACGGCCGTACAGGCGAAATTCTATC
AGTGAATCGTTGTCGACACCGCCGGTGCTATCGGTAAGAAGTCTGATCGT
ACCGTGTTAGTCTTGCAGACGGTACCGTACGACTTCGGACGAGTGCACAG
GTGCGATAGGTTTTAAAGCATGCCGATCATGCCGGTCGATGAAAAATGTT
CGATGCTGAATAATATCACAGCAGCGGCTCACCTCTACGGTACGACAATG
TTCAGGATCCGTGTGCGGCTCACATACAGACCTCGAGCATTCGTGACGTT
TTTATCGGGGGGTTGCGGTACCTGTGCTGAGAGGATACCGTTTACCGAAT
AATTGAAGAAACTAAGCTCATTTCACTGCCACGGGTCGTACATACAGCCT
TCCCCGAGATGTGTGAGCCCGCAACAAACCGTATTTTTTCATGTTGCAGC
TCAAAGAGTATCCCGGAAATGGTATCACGCGACCTCGTGCCCGAAGTAGT
GTATCCCGGAGTCATCACACCCTCGTGCGATCATGCCGGTACGTGCGTGC
GCCCGCATTCGTACGGTATGTTGCTTTTTTTTGTTTTGCTCATTCACTTG
CTGTTTCATGTCCAAGGTTCTCACGGCATTTTGACTCGCTCGTTGGTCGT
TCTGCAGTTACATGGTACTCGCAAGACAACAGGACCTCGACATGGCACGT
CGACGGAATCCACTCCTCCGTTTTCCTACTGCGATTCGGTGAGCTCAGAA
GCTTCACCGCTTGCTTTGGGTCAACCGCTCGTCAGTTTCAGCCCACCTTT
TGATGCCGCTCACGTCGGTCCGCCGCATAGGCATGACAGCACGTTCGGGC
AGGAAAGCGGCAGGGTGATCAATTCTTCGCCCCTCTTCGGCATGCGGATA
CACCACCCACGCACATCCGTGCCTGTCCTCGAGACTTTGCCAGAATCGCC
TTTTTCGTCGAAAGGTAATCCAGAAAGCATCCAACCCCCAGCAGCCACAT
CGCCGGGTTCTTTCTCGAGGCCTTTTTTACCGTCAAGTTTGGGCAACGGT
AACCAAGGACCAACACTGGCAACAGATGCTGGAGCTAGCAGAACAGACGT
GAGTTCGAGACACGTACGGGTCAGGCTTGAAACGCACTATTGCACGTCGA
GCCAAGGGCTCGTGAACAAACTTACCTCATTTTCGAGCCTTCGTCGATCC
GATTCTATATGAGATTGATACTGTCCCCCCTAGAGTGTAGTCTTCCGCTT
TTTATTGCCTGCTATCGCTCCGCAGTCATGCCGACACAATCTATTAGATA
TGAGGCTCCGGTGTCATGACCTTCTTCACGTTTCTGCCTTTGTCGCATTC
GGCTGGCGAGTCAGGGATTGCCTTTTTCCGTAGAGGTGCGAGACGACGAC
GAAGAAGTATCTGCGGAAAACCCCGACGCCTTTGGAGGGGTGGAGGGCGG
GTTCCACTCCTCTTCAACCCCGTCATCGCTGTTTGCTTTATGCTCTGCTG
CACCTTCCAAGTAAGAGTTTTCATTTTCTTTACGGTTGAGTCAGATTTAG
ACAGCATTATGCTAGCTGATACGCCGTTTCGCCTCCGACTCAACACCTTA
CAACGGCTACTTTCGTTGGTAGCTTCGAGTTCTTGGCACATCGTTGATGA
TCCGATTCGTGTGTGTCGTTACAGTCAACAGTTTTTCGGTGCACGAAACC
GTCGCGGAACGACACAGAAATCCATCTTCATCTCAACTGTAAAGTTTTAT
TCTCGTGAGTAAATCAAGTAGGCGAACCTTGTCGACACCGGGGCTTCGCC
TTCTACACCAAATAAAAAGGCTCGGTTCGCGCGCAAATCTAGGAGTGCGC
ACTTGTAATGGTGTGACGTTATCGTGTTCTGTTTGCCGGTGCCACTGAAC
ACCAACCGGCGACATCCCGTTTTGACGCGAACAACCAGCAGAAAACCCAC
AACTTAAACTACTGATTTCATTTGGCGCGCAAGCCCCATCTTTCGTGTTT
TGTGTTTTACATTGTTCGCTGATGGGCCGATGGGAATTGCAACCTCTCGA
TGTCAGCTCAGCCCTTGACACCGGATTTGTTTTGCGGGGGTCACTCCTCC
TGCTTAATTTTTTTTTTTTGTAGCGTTGTGTGATATTTCGGAGTCCAGTT
TTGGTTGGAGATCCTGAGTGTACCTTCATTTTAAGCAAGAATTTCCCGGC
GTACTGAAATTCGATCGTACCATCGACGAGGGAAAGGGATTGCTGTCCCC
TTTCTCGCGACAAAAGCTCAACCAAAAAGGCAAGCACCGCAGAGGAAAGT
GGAGAAAAAAACAAAATTAAAAAAAAAAAACTCCTGTGTTGACTTACCCC
TGTGTGACCCCAGTTGGAGCGTCTACCTACCCGAAAGGTGCAGAGTGGCG
TCCAATTAAAGGGATGACAGCACACACACAACAAAACACACTGCTGTAAT
ACCCTTTAAGGGTAGGTAGCCTTTGACCACGGAAAGCGTCCCCAATCGTA
TTAGTAAGCAGTAAGGACATTCCAAGGTACTGGCTGAGGTCGGAGCGGTT
TTTAATGTGAAGACAACACACAACGACAGAACATGAAGATCATGCTCTCC
CTCTCTCTGCTAGCCTCACTCTTCCTCTCATCGTGATAGTGTGGCCATTC
GGGGCTGCTGAGTTGCTCGTCCCACCGGCGTGAAGTGCGCTGTCGCTCTC
GTTGAAAACTTGAGCAGCTGTTGAACACGGACGCTTGTCCTGTTCGCTTT
CGATCAATTTTTAACAGGTCTATTCTGTTGATGCACAACCCACCCTCTTT
GGACCGTGATGTGAAGGACATCACTGCGCCGGCCGCATTATACACGAGCA
CCGCCGGGACTCGTATTCCTCCGAAATTCGTCGTGGTGAGAGCCTAAAGT
ACATGCCAGTCCTTTGCTTACCTTTTTTTTTTCTCTCAAGACTCTGCAAC
AGTCTTTCCTAGGCTCTGCGCTCTGGTTTGCCGTGTTTCGCCTCGGAGTT
GTGCTCTGGTTGGTTACACCGATTTGCCTTGGTTGTGTTTGTCACCAATT
TTGTTTTTCGACCCTGTATTACTACTTCGAAGTATCTTTTTCGTACTCTG
GCCACCACAGAACGTACCCCAACAGAACAATCTCTGATTTTTTTTGGCGG
CCATCGTATATTTCCTTTTTTGTGTTCCTCCTAGCACAAAATATGTTTGG
TTAGTGACCACGGGCTGGACTTGGTGGTGAGCTCATGTGAGAATCAACAA
GAACAACAACAGTGTCGAAAACGAGATAAAGATGGAGTCGTCACCTTGCA
AATCTTCCTGATATTTGTCATGTTTCGTGCATCCCCAACTGACGACCAAT
GTGAGCAGTGATCGTTTTGTTACCTGCTGACCAAACCCTTCCGTGTGCCC
GCGTCCGTGATTTTTGTCAGCGTTCATTAGAAGAAGATCTCGAGGTATTC
AGACACTTCCAGCAGGAGCTCGAGCAAAAACGCTGACAGTCATGGTCCAC
CACATCCCCGGATGTGCAACGGTGGTGTTGACCCCCGTGTATCATGTACG
CTTTCGTATGCCACGTTGCAAGCTTTTTGGTCAAATTTAGTGTGCATACG
TCCCAGATTCAGAGGAAGCGTTTGGTCAAGTAGCATGATATGCCTGTGTC
TGTGTGTGGCACTTCGATTTGGTCCGTTGCGACCGAGTAGGAGCTGTTTG
AAGGACTGTTGTCACGGATCTTCGCTATTTCGTATTTGTTTATATATACG
GAGTATATATTCGTGCTGCCGTAATATTCTTGGAGAACGCCTCGCGACCG
TTGATATTATTGGTGAAATATACCACCCCGGAGCATTGGCAAAGGAAGGC
AATCCTTGTGATAAGCGAAGAAGCCCCGGGGCGAAAAATCCGCCGGGCGT
CTCCTCTGACCTATTTGGGGCACATGGGAAGGCAAGTACCGGTTGAAATA
CACAACACATGAAGAGCCAGTGCTGGAACATACGACGTCGGGCCTCAACA
GCATCTACTAGAAAACACACCAAGGAGCAGAACGTCGATGAAAGTTGAGC
TTGATTGAGCCCGTCAGGGTCGTTTTCATCAATGACTTTTTATGTCAAAT
ATTTCGACCTGGTCAAACATTTCGACACATGTACGAAGGCATTTGTCGAC
TTTTTTTCAAAAAGTGTGATCTGATCTGCGGCTCACACTCTTGACACTTT
CTTTTACATTTCTTTGACATCCCCAAGCGAGGCCGAGACGCTGCTGGCAG
AGGGTCCAGCAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig8:983681..999292+ >mRNA_P-littoralis_Contig8.235.25 ID=mRNA_P-littoralis_Contig8.235.25|Name=mRNA_P-littoralis_Contig8.235.25|organism=Pylaiella littoralis U1_48|type=CDS|length=2178bp|location=Sequence derived from alignment at P-littoralis_Contig8:983681..999292+ (Pylaiella littoralis U1_48)
ATGAGCACTGATGTGTCCAAGTGCAACCAGGTCGTTTTTGAACTTTTGTG
TAAGGTGGCGGAGCTTGTTGTATCAGCAAAGGTCTGTCTCCATCAACAGA
AACGGGCAACAATCAACAGCAAGTTTTCTTTGCATGTACAAGAGCTTGAT
GTCGTCAGAAACTCCATGAGGGCGTGGGAAAACAACCTCTCCATGCCCGT
TGGCATCGATATATTTTGGGAGGAGCACAGACGGGGAGACGCGGCCCCGC
GAAGGGAGCTACTGGAGCGGTGGGAGATCATGTACGAGGCTCAAGACGCC
GTAGAGAGCAAATCTTCCCAGCTCAGGCATTTCTTCAAGCGATCTATCAT
TCTTCTTCGTACGCTCTACTCTTTCGTGCGGTTACTGCCTGCTTACAGCG
TTCACAAGCGGATTCAAAGCAGGGACCCGTCGTTGGTACATTCACAGGAC
GACACGGGTTTTTGCCTTTATCCCGGAGGTAGCAGTGGCTCTGGGCTGAG
CTTTAGTGCCTTTGCCGGTGGGGGCGAAGAGCAGGTAGGTCAAAGCGGCC
GGAGCGTCTCGACTAGCTGCTACGCCTTCAAGCCTTTAGAAGCTCCAAAC
GGGTCGGTAAAAGTCGTCTGTCATCACCGGCGAGGTGTGGACTCTGAGGC
CTATCATACTGGACAAACCTGGACTCCAAGTCTCACACCCAATATGACGA
CTTCTCTTATACAAGATTACGTCCCTGACGAGTATGAGGGAAGTACAGCA
GCTGGGATGACGCCGACTGTGGAAATAAATCCCGACCAAAGGCTGCCCAG
CACACCAGAAGACCGAGGCTCGAGGCCGAAGGGTGCCGTTGATTCGCATG
GCCACCACACGGGGGTGCAAACACAAGTAGATTGTGCTGTGGGGAATGCG
CCCACGAGCTCTGGAGCACATTTGGAGGCTGACGTACCCGACCAAGATAT
TGGAGGGGCTGACACGATGCATTGGCCATCTCCGCAGTTGGGGCACGGGT
ACGCGGAGAGGCACGTGCACAAGCTAGTTGGACAAGGTCCAGCGCCATTT
TTGACACCAGGACCGCATCGTGGACGAATGCTTGGCTTGAGTAATTTCAC
GATGGAGCCGCTGGAGTTGGGGCCAAACGCCGGAAGCGAATCTCGAGCCT
CCCCAGTGCCAGATATGGCCGTGCAGCAGGAAAATGACGATGTGTATGAA
GTTGGAGACCCACCACGTTTTGCTGCACAAGGTCATTCGGTCGACAGCGG
AGGGCGGGCACAGACACATGGCAGCACGGAGCAGCCCCCCGCGTCCATGA
TGGTTCGGACAGTGGGAGGAAGGCACGGACCTGGTATTCGGGGCAGGATA
CGGCCGTACAGGCGAAATTCTATCAGTGAATCGTTGTCGACACCGCCGGT
GCTATCGTTACATGGTACTCGCAAGACAACAGGACCTCGACATGGCACGT
CGACGGAATCCACTCCTCCGTTTTCCTACTGCGATTCGGTGAGCTCAGAA
GCTTCACCGCTTGCTTTGGGTCAACCGCTCGTCAGTTTCAGCCCACCTTT
TGATGCCGCTCACGTCGGTCCGCCGCATAGGCATGACAGCACGTTCGGGC
AGGAAAGCGGCAGGGTGATCAATTCTTCGCCCCTCTTCGGCATGCGGATA
CACCACCCACGCACATCCGTGCCTGTCCTCGAGACTTTGCCAGAATCGCC
TTTTTCGTCGAAAGGTAATCCAGAAAGCATCCAACCCCCAGCAGCCACAT
CGCCGGGTTCTTTCTCGAGGCCTTTTTTACCGTCAAGTTTGGGCAACGGT
AACCAAGGACCAACACTGGCAACAGATGCTGGAGCTAGCAGAACAGACGG
ATTGCCTTTTTCCGTAGAGGTGCGAGACGACGACGAAGAAGTATCTGCGG
AAAACCCCGACGCCTTTGGAGGGGTGGAGGGCGGGTTCCACTCCTCTTCA
ACCCCGTCATCGCTGTTTGCTTTATGCTCTGCTGCACCTTCCAAGTCTAT
TCTGTTGATGCACAACCCACCCTCTTTGGACCGTGATGTGAAGGACATCA
CTGCGCCGGCCGCATTATACACGAGCACCGCCGGGACTCGTATTCCTCCG
AAATTCGTCGTGCGTTCATTAGAAGAAGATCTCGAGGTATTCAGACACTT
CCAGCAGGAGCTCGAGCAAAAACGCTGA back to top
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