prot_P-littoralis_Contig8.168.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.168.2
Unique Nameprot_P-littoralis_Contig8.168.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length327
Homology
BLAST of mRNA_P-littoralis_Contig8.168.2 vs. uniprot
Match: D8LBH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH3_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 7.640e-130
Identity = 214/338 (63.31%), Postives = 250/338 (73.96%), Query Frame = 0
Query:    1 MGPRRGS-NYGTFVAPPGCCVDEAYRDGGNPTNSGHTENAPSFSQPAPTWI-----EYTISA-----VGLRLTKQGAEVVILEVQDDVVRARGLCEGDVVTHIDGEPLLGSLKAGHSLIEQAGDSLALRIQSG-DGSHAGPGTPKKAKFSVVQHTVRQGDSIKALAKLYGVTADEVRLWNRKYFPVGEPGFLCPGQVLTLRDTAAHEAGDGRKTSSKQTIQDSSASRRKSGGDGGRKRMLYQVREGDSLKTICAHFKLKEGEVRGLNRNVFPIGEPGVVCPGQLLTVFAEDCDSLISDGGSENSAVDESEQAFMQSFTGRETRRSIFSVRMRGAGVIG 326
            MGPR+ S NYGTF+A PG   +E Y  GGN  +S         S PAP +      EY I+       GLRLTK G EVV+ E+ DDV RARGLCEGDVVTH+DGEPLLGSLKA    ++QAGDSL+LR+QSG   S  G G P+KAK+ VVQH VRQGDS++ALA+ YGVTADEVR+WNRKYFPVGEPG LCPGQVLTLRDT A +A D  + S      DS+A RRKS GDG RKRMLYQVREGDSLK+ICA  KLKEGEVRGLNR VFP+GE GVV PGQ LTVFAEDCD L+++ GS +S  +  E+AF+Q FTGR+T+RS  S+ +RGAGV+G
Sbjct:    1 MGPRKKSYNYGTFIASPGHGAEEDY--GGNTASSYQR----LLSAPAPAFSVHHDQEYRIALREDGMFGLRLTKHGGEVVLSEMDDDVARARGLCEGDVVTHMDGEPLLGSLKAAAECMDQAGDSLSLRVQSGHSNSRTGDG-PRKAKYHVVQHIVRQGDSVEALAEQYGVTADEVRIWNRKYFPVGEPGCLCPGQVLTLRDTTADQAKDRNRASL-----DSTARRRKSEGDGARKRMLYQVREGDSLKSICARLKLKEGEVRGLNRGVFPVGEAGVVLPGQTLTVFAEDCDILVTEEGSGHSTEELDERAFIQDFTGRKTKRSSLSLGIRGAGVMG 326          
BLAST of mRNA_P-littoralis_Contig8.168.2 vs. uniprot
Match: A0A0P1AJC6_PLAHL (Peptidoglycan-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJC6_PLAHL)

HSP 1 Score: 65.1 bits (157), Expect = 3.160e-8
Identity = 42/143 (29.37%), Postives = 71/143 (49.65%), Query Frame = 0
Query:  142 HTVRQGDSIKALAKLYGVTADEVRLWNRKYFPVGEPGFLCPGQVLTLR--DTAAHEAGD-------GRKTSSKQTIQDSSASRRKSGGDGGRKRMLYQVREGDSLKTICAHFKLKEGEVRGLNRNVFPIGEPGVVCPGQLLTV 275
            H V  G++++ +A LY  T + +R  NR+YFP GE G LCPGQ+L +R  +T   E  D         K  S  ++ +  A+   +     R +  + V   D+ ++IC  F +       +NR  +P+G+   + PG+ + V
Sbjct:   99 HLVSAGETLRHIAALYNTTEEILRQDNRRYFPTGERGLLCPGQLLHVRLINTGEMEKDDPTTSGDADAKALSLSSMSEEEATYTGTSAAFARYK-THLVAPEDTFESICKTFNIPYSYFLQINRGRYPVGKRAELVPGERVVV 240          
BLAST of mRNA_P-littoralis_Contig8.168.2 vs. uniprot
Match: A0A2N6ED56_9DELT (Lytic transglycosylase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6ED56_9DELT)

HSP 1 Score: 62.4 bits (150), Expect = 4.220e-7
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 0
Query:  142 HTVRQGDSIKALAKLYGVTADEVRLWNRKYFPVGEPGFLCPGQVLTLRDTAAHEAGDGRKTSSKQTIQDSSASRRKSGGDGGRKRMLYQVREGDSLKTICAHFKLKEGEVRGLNRNVFPIGEPGVVCPGQLLTVFAE 278
            +TVR+GDS+  +A+ + V+  E+R+WNR    +G    + PGQ L +  + A     GRKT+                GDG  ++++Y+VR+GD+L  I   F++   ++R  N     + +  V+ PG  LT+  +
Sbjct:  458 YTVRKGDSLWKIARKFSVSEKELRVWNR----LGWSNVIRPGQTLAVSASGAK----GRKTTGN--------------GDGAPRKIVYEVRKGDTLWGIGRQFEVATRQIRNWNN----LPKNHVLRPGDQLTLLVQ 568          
BLAST of mRNA_P-littoralis_Contig8.168.2 vs. uniprot
Match: A0A2N6DZQ2_9DELT (Lytic transglycosylase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6DZQ2_9DELT)

HSP 1 Score: 59.7 bits (143), Expect = 3.150e-6
Identity = 41/138 (29.71%), Postives = 68/138 (49.28%), Query Frame = 0
Query:  142 HTVRQGDSIKALAKLYGVTADEVRLWNRKYFPVGEPGFLCPGQVLTLRDTAAHEAGDGRKTSSKQTIQDSSASRRKSGGDGGRKRMLYQVREGDSLKTICAHFKLKEGEVRGLNRNVFPIGEPGVVCPGQLLTVFAED 279
            +TVR GDS+  + + +GV+  ++R+WNR    +G    + PGQ L +  +     G   K + K+T              G +K+++YQV+ GD+L  I   F +  GE+R  N     +    V+ PG+ LT+   D
Sbjct:  452 YTVRNGDSLWKIGRRFGVSEKQLRVWNR----LGWSNMIRPGQKLVVSSS-----GSSAKVA-KRT--------------GPKKKIIYQVKSGDTLWGIGRRFAVATGEIRSWNN----LSTDHVLRPGERLTLLVRD 561          
BLAST of mRNA_P-littoralis_Contig8.168.2 vs. uniprot
Match: A0A533R8S7_9DELT (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A533R8S7_9DELT)

HSP 1 Score: 57.8 bits (138), Expect = 1.360e-5
Identity = 46/147 (31.29%), Postives = 74/147 (50.34%), Query Frame = 0
Query:  133 KKAKFSVVQHTVRQGDSIKALAKLYGVTADEVRLWNRKYFPVGEPG-FLCPGQVLTLRDTAAHEAGDGRKTSSKQTIQDSSASRRKSGGDGGRKRMLYQVREGDSLKTICAHFKLKEGEVRGLNRNVFPIGEPGVVCPGQLLTVFAE 278
            K  K    ++TVR+GDS+  +A+ + V+  ++R WN      G  G  L PGQ L +    A   G G+  ++ +    + A      G G  ++++YQVR GDSL TI   F ++  ++RG N     +    V+ PGQ LT+  +
Sbjct:  469 KGGKGGGKRYTVRRGDSLYKIARRFNVSEQQLRGWN------GLRGNALKPGQSLVV----AAGTGAGKANAAAKATPAARA------GKGDVRKIVYQVRAGDSLWTIGRQFDVEASQIRGWNN----LPRNPVLRPGQRLTLLVK 595          
BLAST of mRNA_P-littoralis_Contig8.168.2 vs. uniprot
Match: A0A1M6C5Q5_MALRU (Membrane-bound lytic murein transglycosylase D n=1 Tax=Malonomonas rubra DSM 5091 TaxID=1122189 RepID=A0A1M6C5Q5_MALRU)

HSP 1 Score: 55.8 bits (133), Expect = 5.440e-5
Identity = 42/135 (31.11%), Postives = 60/135 (44.44%), Query Frame = 0
Query:  142 HTVRQGDSIKALAKLYGVTADEVRLWNRKYFPVGEPGFLCPGQVLTLRDTAAHEAGDGRKTSSKQTIQDSSASRRKSGGDGGRKRMLYQVREGDSLKTICAHFKLKEGEVRGLNRNVFPIGEPGVVCPGQLLTVF 276
            +TVR GDS+  +AK +GV+  E+R+WNR    +G    L PGQ L +           RK                    G  K+++Y VR GDSL  I   F ++   +R  N     +    V+ PGQ LT+ 
Sbjct:  427 YTVRSGDSLWKIAKRFGVSEKELRVWNR----LGWSNMLKPGQKLAVSKPRGRTKVASRKV-------------------GPAKKVVYSVRPGDSLWKIGRQFDVELDMIRLWN----DLSHGQVLRPGQKLTLM 534          
BLAST of mRNA_P-littoralis_Contig8.168.2 vs. uniprot
Match: M4BQ32_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQ32_HYAAE)

HSP 1 Score: 55.1 bits (131), Expect = 6.680e-5
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 0
Query:  134 KAKFSVVQHTVRQGDSIKALAKLYGVTADEVRLWNRKYFPVGEPGFLCPGQVLTLRDTAAHEAGD 198
            + K +   H VR GD+ + L+KLYG+T DE+R +NR YFP G  G + PG  L ++     +  D
Sbjct:  255 EVKLTKQIHVVRLGDTPEGLSKLYGMTYDEMREYNRAYFPKGYSGEIRPGYKLVVKRVVNMDVSD 319          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.168.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LBH3_ECTSI7.640e-13063.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0P1AJC6_PLAHL3.160e-829.37Peptidoglycan-binding protein n=1 Tax=Plasmopara h... [more]
A0A2N6ED56_9DELT4.220e-729.93Lytic transglycosylase n=1 Tax=Desulfuromonas sp. ... [more]
A0A2N6DZQ2_9DELT3.150e-629.71Lytic transglycosylase n=1 Tax=Desulfuromonas sp. ... [more]
A0A533R8S7_9DELT1.360e-531.29LysM peptidoglycan-binding domain-containing prote... [more]
A0A1M6C5Q5_MALRU5.440e-531.11Membrane-bound lytic murein transglycosylase D n=1... [more]
M4BQ32_HYAAE6.680e-540.00Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018392LysM domainSMARTSM00257LysM_2coord: 228..276
e-value: 0.55
score: 15.6
coord: 141..189
e-value: 4.9E-4
score: 29.4
IPR018392LysM domainPFAMPF01476LysMcoord: 229..273
e-value: 0.058
score: 13.5
coord: 142..188
e-value: 2.6E-5
score: 24.2
IPR018392LysM domainPROSITEPS51782LYSMcoord: 140..188
score: 11.697074
IPR018392LysM domainCDDcd00118LysMcoord: 142..188
e-value: 7.32746E-7
score: 43.2429
IPR036779LysM domain superfamilyGENE3D3.10.350.10LysM domaincoord: 129..202
e-value: 1.3E-7
score: 33.0
IPR036779LysM domain superfamilySUPERFAMILY54106LysM domaincoord: 140..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..216
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 57..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:710254..716896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.168.2mRNA_P-littoralis_Contig8.168.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 710196..717497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.168.2 ID=prot_P-littoralis_Contig8.168.2|Name=mRNA_P-littoralis_Contig8.168.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp
MGPRRGSNYGTFVAPPGCCVDEAYRDGGNPTNSGHTENAPSFSQPAPTWI
EYTISAVGLRLTKQGAEVVILEVQDDVVRARGLCEGDVVTHIDGEPLLGS
LKAGHSLIEQAGDSLALRIQSGDGSHAGPGTPKKAKFSVVQHTVRQGDSI
KALAKLYGVTADEVRLWNRKYFPVGEPGFLCPGQVLTLRDTAAHEAGDGR
KTSSKQTIQDSSASRRKSGGDGGRKRMLYQVREGDSLKTICAHFKLKEGE
VRGLNRNVFPIGEPGVVCPGQLLTVFAEDCDSLISDGGSENSAVDESEQA
FMQSFTGRETRRSIFSVRMRGAGVIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018392LysM_dom
IPR036779LysM_dom_sf
IPR036034PDZ_sf