prot_P-littoralis_Contig8.164.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.164.1
Unique Nameprot_P-littoralis_Contig8.164.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length327
Homology
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI)

HSP 1 Score: 543 bits (1398), Expect = 2.090e-193
Identity = 286/326 (87.73%), Postives = 296/326 (90.80%), Query Frame = 0
Query:    1 MEVDACPDMGVEEKKGEEPAVPAATAAVSAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMAAFGHRRAI 326
            MEVDA    GVEEKKGEE  VPA  A+          G+   NIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNG DVSIYDAMEVACTAVGA+GL LNEALVEKQK+LYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNS+PLFLLMNPSPAQGSKELPVLIHESESHMLDG +QS FVQL FQLETTQAEQISVEHVAKATPTDG+SSIDLHAGAVSTSLRTLLARIEILRRFLEETK GN++VDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSV YLASVQKSAGS+NDLADKFM AFGHRR I
Sbjct:    5 MEVDA----GVEEKKGEEQKVPATAASAP--------GKKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNISVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVAYLASVQKSAGSMNDLADKFMTAFGHRRPI 318          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 7.820e-105
Identity = 167/198 (84.34%), Postives = 172/198 (86.87%), Query Frame = 0
Query:    1 MEVDACPDMGVEEKKGEEPAVPAATAAVSAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQ 198
            MEVDA    GVEEKKGEE  VPA  A+          G+   NIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNG DVSIYDAMEVACTAVGA+GL LNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNS+PLFLLMNPSPAQGSKELPVLIHESESHMLDG +QS FVQL FQ
Sbjct:    5 MEVDA----GVEEKKGEEQNVPATAASAP--------GKKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQ 190          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA)

HSP 1 Score: 277 bits (708), Expect = 1.050e-88
Identity = 144/286 (50.35%), Postives = 193/286 (67.48%), Query Frame = 0
Query:   41 DRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEA-LVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHM-LDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMAAFGHRR 324
            +R I LHPL +ITISDH T + +G   +  G +V+GLL+G Q GL+VSI DA E+  T +G DG+ +  A  V  QKDLYT VY  YE+LGWY+VG +    D+ + R+MTK+N +P FLLM+PSP   + +LP+ ++ES+  M  D     +FV   FQL+T QAE+I++E +AKATPTDG++S+DLH  ++  SLRTL  R + L  FL+ TK G V  DY LLRQ+SSICNQLP +D A+   +F+ E+ND L V YLASV KS+ S+ DL DK  A   H R
Sbjct:   23 ERKIFLHPLAIITISDHFTCIESGASVKPRGSKVLGLLWGKQQGLEVSIMDAQELHYT-LGDDGVPVITAEKVNSQKDLYTEVYKNYELLGWYSVGIDADGKDMAVHREMTKYNESPFFLLMHPSPDPEASDLPISLYESKMVMGADDTPTIVFVTSEFQLQTMQAERITMERIAKATPTDGVASLDLHINSLGASLRTLNLRFDALLAFLKATKAGEVPTDYRLLRQVSSICNQLPAVDTAELKGDFITEYNDMLMVNYLASVTKSSASLGDLIDKHSAVVSHHR 307          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A7S2BCI8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCI8_9STRA)

HSP 1 Score: 259 bits (663), Expect = 8.650e-82
Identity = 129/283 (45.58%), Postives = 189/283 (66.78%), Query Frame = 0
Query:   35 KGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEA-LVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKF 316
            K     +  + LHPL +I +SDH+T +  GG   + G +V+GLL+G Q GL+VSI DAME+  + + A+G+ + EA  V   KDLY   +   ++LGWY+VG EV E+D+ I R+MTK+N +P FLLMNP+P + +K+LP+ ++ESE H+++     +FV   FQL+T Q E+I     AK    +G +++DLH   VS+SL+TL +R   L ++LE TKNG V  DY LLRQ++S+CNQLP +D  + S EF+ ++ND+L V YLAS+ K    +NDLA+KF
Sbjct:   24 KAAAASENKVFLHPLAIIGMSDHYTTIEAGGSLAKPGSKVLGLLWGRQQGLEVSIMDAMELGYS-LDANGVPVIEAEKVNGMKDLYLENFKDRDLLGWYSVGLEVVEMDMAIHREMTKYNESPFFLLMNPNPDEEAKDLPISLYESEMHVINDTPTMLFVTCEFQLQTMQMERIXXXXXAKEKAHEGEATLDLHMNTVSSSLKTLSSRASALVQYLEATKNGTVPTDYRLLRQVASVCNQLPAVDTDELSGEFVGDYNDTLMVNYLASITKGTNELNDLAEKF 305          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA)

HSP 1 Score: 253 bits (646), Expect = 4.440e-79
Identity = 133/306 (43.46%), Postives = 199/306 (65.03%), Query Frame = 0
Query:   23 AATAAVSAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDG-RSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQ--------FSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMAA 319
            AATAA       K  G+G  +I LHPL +ITISDH+TRVSTGGG      +++G+LFG ++G ++ IYDA E+    VG + + L++A V KQ +LY AVYP Y++LGWY+VG E    D+ +Q+QM    + P+F+L++P P + +K LPV +++SE     G  + ++FVQ  FQL+T QAEQI +EHVA++TP +G S+I+ HA  ++TSL  L +R+ +LRR+L   + G+V  D+ LLRQI+++ ++L  M  A          SE   R+  D+L+VT LA++QK A +++  A KF  A
Sbjct:    7 AATAAAEGAEESKSAGDGQLSIHLHPLAIITISDHYTRVSTGGGVPPRDAKILGVLFGERSGAEIGIYDASEIGYDVVGGE-IVLSQASVAKQVELYEAVYPTYKVLGWYSVGLEPCPSDIKLQQQMKTHCANPIFVLLDPEPPKDAKALPVTVYQSEDQAGGGGAAATVFVQGSFQLQTVQAEQIGMEHVARSTPAEGSSAIERHATTMTTSLTALASRLAVLRRYLVAVRGGDVPADHKLLRQITAVTSELRAMGNASGSGGGDAALSEALARDRCDALAVTALAALQKGAAAMDAAAHKFNLA 311          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A7S2S2E8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2E8_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.200e-75
Identity = 128/294 (43.54%), Postives = 195/294 (66.33%), Query Frame = 0
Query:   26 AAVSAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGL-ALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMA 318
            A  S+E    G  E +R I LHPL ++ +SDH T + TG   +  G +V+G+L+G Q GL VSI DA+E+A   + A G+  ++   V +QK LY  VY  +E+LGWY+VG EVT +D  IQ++ TK+N +P FLL+ P P   +K+LP+ ++ES+   ++   +  FV   FQL+TTQAE+I++E V+KA+ T G+SS+DLH   +S+SLR+L +R +IL  +L+   +  V VD+ LLR+I+S+CNQLP  D  +    F+ +FND+L + +LA + KS+ SV++L+ KF A
Sbjct:   37 AMASSEPGTGGDPESNRKISLHPLAIVAVSDHCTGIQTGASTKPPGSKVLGILWGKQQGLQVSITDAVELAYE-LDAQGMPVIDPEAVNQQKSLYMEVYKGHEMLGWYSVGEEVTPVDGLIQQEFTKYNESPFFLLVQPVPDPEAKQLPLTLYESQWTQVNEEMKMTFVPCSFQLDTTQAERITMEAVSKASTTAGVSSMDLHVQELSSSLRSLASRTQILVSYLKAIADQQVPVDHKLLREIASVCNQLPAADAQELQGAFLSDFNDTLLINHLALITKSSNSVSELSTKFSA 329          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A5D6XJP9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP9_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.190e-70
Identity = 118/292 (40.41%), Postives = 182/292 (62.33%), Query Frame = 0
Query:   31 ERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNP--SPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHA--GAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMA 318
            +R ++  G G+R I LHPL ++  +DH TR   G     +  +VIG LFG Q+GLDV++YD+ E+    V  D + L++  V  +   ++ V+P +E+LGWYTVG++V   DL   R + +FN +PLF+L++P        K+LPV + ESE HML+G    +FV+ PF++ET++ E ISV+H++K  P    S   LH   G V  +++ L  ++++L RFL+  KNG+  +D  LLR ISS+CNQLP M    F   F++E+ND+L V +LA++ K A + N + D+F A
Sbjct:   16 QREERSSGGGERQIQLHPLVLMNAADHFTRERRGCAPGASPPQVIGALFGVQSGLDVAVYDSFELKYDVVNGD-VQLDKEFVTSRIQQFSQVFPGFELLGWYTVGSKVQPSDLATHRSIMEFNESPLFMLLDPVSKALNTKKKLPVTLFESELHMLNGAPTMLFVKAPFKIETSETEGISVDHISKIAPIGDSSKSSLHPYLGNVRDAMKMLDRQVDVLVRFLQAMKNGDAPMDRNLLRHISSVCNQLPAMTSKSFDASFLQEYNDALLVAFLATLTKGATNANTVVDRFSA 306          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: UPI000C87477B (COP9 signalosome complex subunit 6 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C87477B)

HSP 1 Score: 227 bits (579), Expect = 2.580e-69
Identity = 113/280 (40.36%), Postives = 180/280 (64.29%), Query Frame = 0
Query:   46 LHPLTVITISDHHTRVST------GGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSS---IDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKF 316
            LHPL ++ ISDHHTRV        GGG+  AGGRV G + G Q G  V I+++ E+ C     +   L+   +EK+ +LY  V+P + +LGWY+ G++  E D+ I R +   N +P+++L+NPS     K+LPV I+ESE H++DG  Q IFV+  + +ET +AE+ISV+HVA   P+DG S+   +  H   + ++++ L +R++IL ++L   + G++ +D  LLRQ+SS+  +LPTM+  +F ++F+ EFND+L +TYLA     + ++N+L DKF
Sbjct:   13 LHPLVIVNISDHHTRVKAQGLYHGGGGSGGAGGRVFGCVIGVQRGRTVEIFNSFEILCDP---ETHTLDRPFLEKKMELYKKVFPNFYVLGWYSTGSDAQESDMLIHRALMDINESPVYVLLNPSTNPTRKDLPVTIYESELHVIDGIPQLIFVRSNYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRVKILHQYLVAMERGDIPLDNSLLRQVSSLLRRLPTMESEKFQDDFLMEFNDTLLITYLAMFTNCSSTMNELVDKF 289          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: F0Y0C1_AURAN (Trehalase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0C1_AURAN)

HSP 1 Score: 243 bits (620), Expect = 3.660e-69
Identity = 126/282 (44.68%), Postives = 181/282 (64.18%), Query Frame = 0
Query:   36 GKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFM 317
            G+    R++ LHPL ++ +SDH TRV  GG        V+GLLFG Q GLDV+++DA+E++     ADG  L+   ++KQ +L+T VY   E+LGWY +    T   L + R+   +N +PL L+M+P P+  SK+LP+ I E+E  ++D     +F  LPF LET QAE+IS+E VAK  PTDG S++D H  AV TSLRTL +R+ +L  +L     G    D+ LLRQ+S +C+ LPT      + + MR++ND+L V+YLASV K+A +VNDL++KFM
Sbjct:  834 GRAATQRHVGLHPLAIVGVSDHFTRVKLGGARVAPDSPVLGLLFGKQVGLDVAVFDAIELSM----ADG-KLDHDFLKKQAELFTDVYADRELLGWYCLAKSATPAHLDLHREFLAYNESPLCLMMDPEPSAESKDLPITILEAEVQVVDDVPTMLFATLPFTLETLQAERISMEIVAKTAPTDGESALDTHVEAVDTSLRTLGSRVAVLVDYLRAVAGGKAEPDFALLRQVSGLCDTLPTGGAPDQTRDLMRDYNDALMVSYLASVTKNANAVNDLSEKFM 1110          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A8J2WWX0_9STRA (Trehalase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWX0_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.800e-68
Identity = 125/298 (41.95%), Postives = 191/298 (64.09%), Query Frame = 0
Query:   26 AAVSAERTQKGKGEGD----RNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTM--DGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFM 317
            A+  A  T+KG+        R + LHPL ++ +SDH TRVS GG  Q AG  V+GLLFG Q GL+V + DA+EV  T    +   ++   +E+ K LYT VY   +++GWY V    T   L +  +  K+N +PLFLLM+P P Q +K+LP+ ++E+E H L    +++F  +PFQLETTQ E++++E VA+   TD    +D H  ++ TSL+TL AR+  LR +L   + G V  D+ LLR++ ++C++LP++  DGA F E F+R++ND+L+  +LA+  K+A +VNDL+DKF+
Sbjct:  682 ASAHASATKKGRMAAAESTARTVALHPLAIVGVSDHFTRVSVGGSRQGAGSPVVGLLFGMQRGLEVDVVDAIEVHLT----EATKVDAQFLEQSKALYTEVYEDRDLVGWYAVAPAPTANHLALHEEFVKYNESPLFLLMDPQPQQDAKDLPIQVYETEVHDL----KTVFATVPFQLETTQTERVAMEAVAQTGCTDRELMLDTHVASLDTSLKTLAARVRALRDYLAAVRAGTVAADHSLLRKLGALCDRLPSLKSDGA-FEEAFLRDYNDALATAFLATATKNAAAVNDLSDKFV 970          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBH4_ECTSI2.090e-19387.73COP9 signalosome complex subunit 6 n=1 Tax=Ectocar... [more]
A0A6H5KLY7_9PHAE7.820e-10584.34JAB_MPN domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2B7N9_9STRA1.050e-8850.35COP9 signalosome complex subunit 6 n=1 Tax=Dictyoc... [more]
A0A7S2BCI8_9STRA8.650e-8245.58COP9 signalosome complex subunit 6 n=1 Tax=Florenc... [more]
A0A835YT38_9STRA4.440e-7943.46JAB_MPN domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2S2E8_9STRA1.200e-7543.54COP9 signalosome complex subunit 6 n=1 Tax=Rhizoch... [more]
A0A5D6XJP9_9STRA3.190e-7040.41COP9 signalosome complex subunit 6 n=1 Tax=Pythium... [more]
UPI000C87477B2.580e-6940.36COP9 signalosome complex subunit 6 n=1 Tax=Dioscor... [more]
F0Y0C1_AURAN3.660e-6944.68Trehalase n=1 Tax=Aureococcus anophagefferens TaxI... [more]
A0A8J2WWX0_9STRA1.800e-6841.95Trehalase n=1 Tax=Pelagomonas calceolata TaxID=356... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 33..219
e-value: 6.6E-44
score: 151.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 41..321
NoneNo IPR availablePANTHERPTHR10540:SF8COP9 SIGNALOSOME COMPLEX SUBUNIT 6coord: 41..321
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 204..313
e-value: 1.6E-20
score: 73.6
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 42..153
e-value: 1.4E-9
score: 37.9
IPR033859COP9 signalosome subunit 6CDDcd08063MPN_CSN6coord: 43..316
e-value: 1.01E-85
score: 257.952

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:704889..710015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.164.1mRNA_P-littoralis_Contig8.164.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 703473..710015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.164.1 ID=prot_P-littoralis_Contig8.164.1|Name=mRNA_P-littoralis_Contig8.164.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp
MEVDACPDMGVEEKKGEEPAVPAATAAVSAERTQKGKGEGDRNIMLHPLT
VITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAV
GADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMT
KFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLE
TTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLE
ETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLA
SVQKSAGSVNDLADKFMAAFGHRRAI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024969Rpn11/EIF3F_C
IPR000555JAMM/MPN+_dom
IPR033859MPN_CSN6