mRNA_P-littoralis_Contig8.157.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig8.157.2 vs. uniprot
Match: A0A6H5KP28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP28_9PHAE) HSP 1 Score: 1159 bits (2998), Expect = 0.000e+0 Identity = 726/1433 (50.66%), Postives = 879/1433 (61.34%), Query Frame = 3
Query: 270 MWEWSGPVEETLRPRQRQNRHKEDSE-RGMPLPPMSPLWRDHGKGEVGGGIHIVVCVCNEIEEELKVLLSTFRTDSPASCLVRVSFILDSARSPVHAHSDTVEVLKRALRVTPGDGMEEFGEFGCIQYSGSLDKTQVPFDLYVKGPSLPAGKRNSLVIFFDDILPVKISRGEAVEPDVIYVLDADSGHPVNGLQDLDFMWRLLMAEEEAACITCPVRPVNPFESFLALSQTFEYALLQDNIGESHFAVQTTSRGMQCMYKYRSLVEDGRLAQPPCGEGAMPPLLDSFSKTAAGIPALILLDTCPNEGLLVLLRQRGFHVRACSVADGVTCVPNSWLEFYAQRRRWYSGSGVAVISHLMGKEGYFQSEWNRWIISSYAVVANLYLHCGLAFLPVLLAKGIYRIHDFADSRVARVQDQTDSTSDYFTE----------HLDWVVFGAVWAFLVLNAAVYLKRSQDQLWMWINVTSVLWMVLCLAVLAGSGVAVSPWIPVAVLIIPLVFAVLNSSKGIIFSFCHLTIATVPFVLQTAVSSVLVFLYAITTLDSTEWGTRDVGPFDSGVSASRASIMRRRKLCVLFTVMGVSCGIGVVLMVFHSFALFAVVVGTPAAAYFLKLLAVIFPAKLERSRQRMLLGGAGNRPLSLRRNVSEMAPVHGRSPAYRNERHGSSPQNAGR-NRKGLTGKIATTNSSHVTAEDGTPSPGDPISSTAGSFFAVADTSVVSESMSGPSADGTGHRRHGSKCASISSGFAGVAGVGAGGIEGGGI------HSAASRRSNAGSXXXXXXXXXXXXTRYQSMNRSRSPSATLKA----SSDEIPEEPSQGAIGTSGRVSRAVVSNLKAGVRRMSSRGERVSNNTDLSPAT----HGKSIEHARASRTGFSRLLVAKDSVDEITTGSTTAPPTSAGGRTSEAEIRRAWGLRQPTLESDDSELSGPMATEASDNKANPGGVSGSRRGWGFTPALQQGAPSK------------------------------------------------------------------------------------------------------------SAAAAPVDGGVKRYSWARERPPCTSDFDA---------QADTSERRRDWMVASEDRSSMGDDEVMARNTILNSRVGAASSR-----YGNGWGMPGSQRRPIPGSSLTGIRAAWGVSMGGSQDDMACPSPATINATQNSGVGAVYSRGIVEDDEYSESEAEDVDPRLVRHGVIPGNQPRPVG-NALIGIRAAWGTSMGGSQDDMVCPSAAEINAIRNSGESAGSAWHNIAEEDGSESEIEFVDPRSRVPGDTGKRLRSAAGGTLAGIRAAWGTSMDSSQEFDAALSPPTTN--------VTHSRGDDNRGGGPG-RGPPTSAGIRGRWDASSVKNDNGNVIPSH 4094
MWEW GP E L RGMPLP MSPLWR+HGKG+ GGGIHIVVC CNE +EELKV+LSTFR D+ ASCLVR+SF+LD R P A S+T +VLKR LRVT E FG CI +SG+LDKT +PFDLYVKGPSLP GKRNSLV FF+DILPVK+SRGEAVEPD +Y+LDADSGHPVNGLQDL+ MWRLLMAEEE AC+TCPVRPV+P SFLA SQ+ E+AL DN+GESHF VQTT RG QCM+KYR LVEDGRLA+PP GEGAMPPLL+ FSKTAAG+PALILLD+ P+EGLLVLLRQRGF VR+C ADGVTCVP SW+EFYAQRRRWY+GS VAV SHL GKE YFQ+EW+RWIISSYA VANL+LH GLA +PVLLAKG++++ + +SR D D S++ E +LDW+VF VW F +LN YL RSQDQLWMWINVTSVLWM+LC L GSG AVSP IPV ++IIP V A LN+++G I ++ +L +A VPFVL T V+SVLVFLYA+ TLDSTEWGTRDVG FDSGVS RA+ MRRRKLC+LFT M SC +GVV+M+ S +V+G P+AAY LKLL V+ PAKLERSRQ LLG G+RPLSLR +V+E+AP++G P + +RH +N G +KGL K SHVTAEDGTPSPG ST+GSFF + V S SGP+ADG GHRRHGSK ASISSGFAGVAGV GG I H+ SR+S+A XXXXX + R R+ S ++ E + G + + S A+ S L+A ++RM+SRG S++T S A HG +I+ AR RTGF+R L AKDSV+ IT A PT++ +AEIR+AWGLR+ T ESDDS + E+ + K NP G+ G+ + + P A AP DG V+RYSWA +P TS+FDA +A RR W +S D D A NT LN+RVGA S R G+G+ G++RRP +L GIRAAWG S+GGSQDD+AC P T +T+NS +GAVY+ GI+E+DE +ESE E+VDPRL GV GN+ R + L GIRAAWG+S+ GSQ+D+ S ++N I N +I +++ SESE EFVD RS +PG R R GGTLAGIRAAWG SM SQ+ A SP T+N V +SRG D G RG P AG+R + D +VI H
Sbjct: 5 MWEWDGPESERLXXXXXXXXXXXXXXXRGMPLPLMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRIDATASCLVRISFVLDP-RGPAQASSETDKVLKRLLRVTDESATEVFG---CIHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDAVYLLDADSGHPVNGLQDLESMWRLLMAEEEVACVTCPVRPVHPMGSFLAASQSLEFALW-DNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAEPPIGEGAMPPLLNPFSKTAAGLPALILLDSSPSEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIEFYAQRRRWYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANLFLHSGLALMPVLLAKGLHQLVLYDESRGESDDDWNDEWSEWQEESADDGIDQHTNLDWIVFALVWGFFLLNVGFYLTRSQDQLWMWINVTSVLWMLLCGGTLVGSGFAVSPLIPVMLVIIPPVLAGLNTARGTIATWRYLCVAAVPFVLLTTVNSVLVFLYALATLDSTEWGTRDVGSFDSGVSKPRAASMRRRKLCILFTTMATSCALGVVMMISSSLIFLPIVIGIPSAAYLLKLLLVVVPAKLERSRQTYLLGDVGSRPLSLRGSVAELAPINGCPPEFSTDRHSGGDRNGGGIGQKGLGPKSPAKTGSHVTAEDGTPSPGGMDVSTSGSFFGAGMSVVGDSSASGPAADGLGHRRHGSKSASISSGFAGVAGVXXXXXXGGDICWSNSAHATGSRQSSAAGMAGXXXXXNTSGKDGSAAGRPRAXXXXXXXXXXXSRQDVSETAAMATQGRNRKTSSALGSGLRASLKRMNSRGR--SSSTGPSSAVGDDAHGVAIKGAR--RTGFARFLSAKDSVEGITLDG--AKPTTS----KKAEIRKAWGLRKATSESDDS--TEMFVMESLNRKLNPHGIRGNSSSCPPDSSFAESPPPAFRARNTALAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGAPADGEVRRYSWACPQPS-TSEFDAPVSKPDAAARAAEQNRRLSWGNSSMDSEEF--DSQAAINTKLNARVGATSIRSQRDAIGSGFADVGNRRRPPSTGTLAGIRAAWGTSIGGSQDDIACRLPETKTSTRNSRLGAVYATGIIEEDEENESEMEEVDPRLFAPGV-QGNRRRSLSAGTLAGIRAAWGSSLDGSQEDIPYTSTDKMNVIHNPRVGVNGVRAHILDDE-SESENEFVDSRSLMPGIAAGRRRPLGGGTLAGIRAAWGNSMGESQDDIACPSPATSNTRLNSRAGVVYSRGGDRYASGHVVRGQPMPAGMRNGRGQPGLGIDEDDVIGYH 1415
BLAST of mRNA_P-littoralis_Contig8.157.2 vs. uniprot
Match: D8LBH7_ECTSI (Chitin synthase 1, chs-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH7_ECTSI) HSP 1 Score: 648 bits (1672), Expect = 1.190e-211 Identity = 323/463 (69.76%), Postives = 369/463 (79.70%), Query Frame = 3
Query: 270 MWEWSGPVEETLRPRQRQNRHKEDS-ERGMPLPPMSPLWRDHGKGEVGGGIHIVVCVCNEIEEELKVLLSTFRTDSPASCLVRVSFILDSARSPVHAHSDTVEVLKRALRVTPGDGMEEFGEFGCIQYSGSLDKTQVPFDLYVKGPSLPAGKRNSLVIFFDDILPVKISRGEAVEPDVIYVLDADSGHPVNGLQDLDFMWRLLMAEEEAACITCPVRPVNPFESFLALSQTFEYALLQDNIGESHFAVQTTSRGMQCMYKYRSLVEDGRLAQPPCGEGAMPPLLDSFSKTAAGIPALILLDTCPNEGLLVLLRQRGFHVRACSVADGVTCVPNSWLEFYAQRRRWYSGSGVAVISHLMGKEGYFQSEWNRWIISSYAVVANLYLHCGLAFLPVLLAKGIYRIHDFADSRVARVQD--------QTDSTSDYFTEH--LDWVVFGAVWAFLVLNAAVYLKRSQD 1625
MWEW GP E LRPR R N ++D ERGMPLPPMSPLWR+HGKG+ GGGIHIVVC CNE +EELKV+LSTFRTD+ ASC VR+SF+L+ R A S+T EVLKR LRVT E G CI +SG+LDKT +PFDLYVKGPSLP GKRNSLV FF+DILPVK+SRGEAVEPDV+Y+LDADSGHPVNGL+DL+ MWRLLMAEEE AC+TCPVRPV+P ESFLA SQ+ E+AL DN+GESHF VQTT RG QCM+KYR LVEDGRLAQPP GEGAMPPLL+SFSKTAAG+PALILLD+ PNEGLLVLLRQRGF VR+C ADGVTCVP SW+E YAQRRRWY+GS VAV SHL GKE YFQ+EW+RWIISSYA VAN++LH GLA +PVLLAKGI+R+ + +SR + Q +S D H LDW+VF VW FL+LN VYL RSQ+
Sbjct: 5 MWEWDGPESERLRPRARNNSDEDDDGERGMPLPPMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRTDATASCPVRISFVLEP-RGAAEASSETDEVLKRLLRVTDESATEVSG---CIHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDVVYLLDADSGHPVNGLEDLESMWRLLMAEEEVACVTCPVRPVHPMESFLAASQSLEFALW-DNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAQPPVGEGAMPPLLNSFSKTAAGLPALILLDSSPNEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIELYAQRRRWYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANVFLHSGLALMPVLLAKGIHRLVLYDESRGESDDEWNNEWSAWQEESADDDIDRHTNLDWIVFALVWGFLLLNVGVYLTRSQE 462
BLAST of mRNA_P-littoralis_Contig8.157.2 vs. uniprot
Match: D8LBH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH6_ECTSI) HSP 1 Score: 194 bits (492), Expect = 3.020e-47 Identity = 134/282 (47.52%), Postives = 165/282 (58.51%), Query Frame = 3
Query: 3294 DEVMARNTILNSRVGAASSR-----YGNGWGMPGSQRRPIPGSSLTGIRAAWGVSMGGSQDDMACPSPATINATQNSGVGAVYSRGIVEDDEYSESEAEDVDPRLVRHGVIPGNQPRPVG-NALIGIRAAWGTSMGGSQDDMVCPSAAEINAIRNSGESAGSAWHNIAEEDGSESEIEFVDPRSRVPGDTGKRLRSAAGGTLAGIRAAWGTSMDSSQEFDAALSPPTTN--------VTHSRGDDNRGGGPG-RGPPTSAGIRGRWDASSVKNDNGNVIPSH 4094
D A NT LN+RVGA S R G+G+ G++RRP ++ GIRAAWG SMGGS DD+ACP P T N+ +NS VGAVY+ GI+E+DE SESE E+VDPRL GV GN+ R + L GIRAAWG+S+ SQ+D+ S +IN I N S +I +++ SESE EFVD RS +PG R R GGTLAGIRAAWG SM SQ+ A SP T N V +SRG D G G P AG+R + D +VI H
Sbjct: 7 DSQAAINTKLNARVGATSIRSQRDAIGSGFADVGNRRRPPSTGTMAGIRAAWGTSMGGSLDDIACPLPETNNSMRNSRVGAVYATGIIEEDEESESEMEEVDPRLFIPGV-QGNRRRALSAGTLAGIRAAWGSSLDDSQEDIPYTSTDKINVIHNPRVGVNSVRAHILDDE-SESENEFVDSRSLMPGIAAGRRRPLGGGTLAGIRAAWGNSMGESQDDIACPSPATVNARLNSRAGVVYSRGSDRYASGHVVHGQPMPAGMRNGRGQPGLGIDQHDVIDYH 286
BLAST of mRNA_P-littoralis_Contig8.157.2 vs. uniprot
Match: F0XZN2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZN2_AURAN) HSP 1 Score: 100 bits (248), Expect = 4.740e-17 Identity = 89/340 (26.18%), Postives = 152/340 (44.71%), Query Frame = 3
Query: 414 GIHIVVCVCNEIEEELKVLLSTFRTDSPASCLV---RVSFILDSARSPVHAHSDTVEVLKRALRV---TPGDGMEEFGEFGCIQYSGSL-----------DKTQV---------PFDLYVKGPSLPAGKRNSLVIFFDDILPVKISRGEAVEPDVIYVLDADSGHPVNGLQDLDFMWRLLMAEEEAACITCPVRPV--NPFESFLALSQTFEYALLQDNIGE-SHFAVQTTSRGMQCMYKYRSLVEDGRLAQPPCGEGAMPPLLDSFSKTAAGIPALILLDTCPNEGLLVLLRQRGFHVRACSVADGVTCVPNSWLEFYAQRRRWYSGSGVAVISHLMGK 1346
GI VCV E + E++ +++T+R P + +SF++D + P + S ++ L R L + P D FGC +Y G + D+ + PF+++VK +LP GKR S R P I+ D D+G GL D++ ++ LL+ +++ + RP +P+ +L +Q EY + +G S F + GM MY++ +L DG + EG +L+ + T+ I L++LD + G+ + + Q G + TCVP +W +++ QRRRWY+G V L +
Sbjct: 1883 GIRTCVCVYRESDLEIETMMATWRIAGPRPETLPPLHLSFVVDGSTDPENP-SHSLLALCRCLGIDAAAPADA----DLFGCRRYEGEMRASAGASDFSGDREETKEEGALKTYPFEVWVKNGALPRGKRISFA-------RASRRRSCTTPPTAIHFQDGDTGSD-RGLADVEKLFLLLLEDDDTGVVCSKTRPAQYSPWV-WLLRTQQLEYLEMFGGLGGFSWFRSVGCAVGMSVMYRWTAL-RDGVVH-----EGMT--VLEKYVSTSRSIVDLVMLDMVEDYGMTMYILQSGAGSVMSHLTHFRTCVPETWCDYFGQRRRWYTGGLVGNFVILFSR 2200
BLAST of mRNA_P-littoralis_Contig8.157.2 vs. uniprot
Match: A0A8J2PZC0_9BILA (Chitin synthase n=1 Tax=Cercopithifilaria johnstoni TaxID=2874296 RepID=A0A8J2PZC0_9BILA) HSP 1 Score: 63.2 bits (152), Expect = 7.160e-6 Identity = 94/398 (23.62%), Postives = 163/398 (40.95%), Query Frame = 3
Query: 786 VEPDVIYVL--DADSGHPVNGLQDLDFMWRLLMAEEEAACITCPVRPVNPFESFLALSQTFEYALLQ--DNIGESHFAVQTTSRGMQCMYKYRSLVEDGRLAQPPCGEGAMPPLLDSFSKTAAGIPALILLDTCPNEGLLVLLRQRGFHVRACSVADGVTCVPNSWLEFYAQRRRWYSGSGVAVISHLMGKEGYFQSEWNRWIISSYAVVANLYLHCGLAFLPVLLAKGIYRIHDFADSRVARVQDQTDSTSDYFTEHLDWVVFGAVWAFLVLNAAVYLKRSQDQLWMWINVTSVLWMVLCLAVLAGS------GVAVSPWIPVAVLIIPLVF---AVLNSSKGIIFSFCHLTIATVPFVLQTAVSSVLVFLYAITTLDSTEWGTRDVGPFDSGVSAS 1940
+E D Y+L D DS + + L RL+ + E C + P+ + + Q FEYA+ E F + G +++ +L++D ++ ++KTA+ + D + L LL ++G+ + +VAD T P S+ EF+ QRRRW S + L + QS N I Y + ++ + L ++ +Y ++VA + ++D Y + V+ F+VL +L S Q+ ++ SV++ + LAV + A+SP PV VL + +F AVL+ + H + F L + + + LYA+ L+ WGTR+ G AS
Sbjct: 653 LEADNTYILAIDGDSKFEPSAVMKL---LRLMNVKNEIGCACGRIHPIG--KGIMIWYQKFEYAISHWFQKAAEHVFGCVLCAPGCFSLFRASALMDDN--------------VMHKYTKTASEPRHFVQYDQGEDRWLSTLLLKQGYRIEYAAVADAETYAPESFHEFFNQRRRWTPSSIANTLDLLADYKRVCQS--NNNISKMYILYQSMVIGFSLFSPSIVFTMLVY-------AQVATFEAESDKMLLYNSL--------PVFTFIVL---CFLADSNYQI-IFAKFISVVYGFVMLAVAVATINQIILETALSPT-PVFVLCMISIFVLAAVLHPQEF------HNIFYGLIFFLMIPCTYIFMALYALINLNVINWGTREAASAAIGKHAS 1003 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.157.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.157.2 >prot_P-littoralis_Contig8.157.2 ID=prot_P-littoralis_Contig8.157.2|Name=mRNA_P-littoralis_Contig8.157.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1506bp MASEVIMWEWSGPVEETLRPRQRQNRHKEDSERGMPLPPMSPLWRDHGKGback to top mRNA from alignment at P-littoralis_Contig8:665454..682253+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig8.157.2 ID=mRNA_P-littoralis_Contig8.157.2|Name=mRNA_P-littoralis_Contig8.157.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=16800bp|location=Sequence derived from alignment at P-littoralis_Contig8:665454..682253+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig8:665454..682253+ >mRNA_P-littoralis_Contig8.157.2 ID=mRNA_P-littoralis_Contig8.157.2|Name=mRNA_P-littoralis_Contig8.157.2|organism=Pylaiella littoralis U1_48|type=CDS|length=4518bp|location=Sequence derived from alignment at P-littoralis_Contig8:665454..682253+ (Pylaiella littoralis U1_48)back to top |