mRNA_P-littoralis_Contig8.145.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.750e-65 Identity = 106/111 (95.50%), Postives = 106/111 (95.50%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYE 333
LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNA T LGVPVVECNCHRVNSAVLWALGIAG A TCKNKLMGDLMKKLAA VGVFSHSAVNNDMLKEIQRLEADLHRVYE
Sbjct: 149 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE 259
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 204 bits (519), Expect = 3.080e-60 Identity = 102/119 (85.71%), Postives = 107/119 (89.92%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTR 357
LTLEYF DL+G SV+ DVFL FTVDQGKN+VNACT LGVPVVECNCHRVNSAVLWALGIAGSATTCKNK M KKLAALVGVFSHSAVNNDMLKE+QRLEADLHR+YE IRRNDTR
Sbjct: 152 LTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTR 266
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 200 bits (509), Expect = 8.270e-59 Identity = 100/119 (84.03%), Postives = 105/119 (88.24%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTR 357
LTLEY DL+G SV+ DVFL FTVDQGKN+VNACT LGVPVVECNCHRVNSAVLWALGIAGS TTCKNK M KKLAALVGVFSHSAVNNDMLKE+QRLEADLHR+YE IRRNDTR
Sbjct: 152 LTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTR 266
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 186 bits (473), Expect = 2.240e-54 Identity = 92/118 (77.97%), Postives = 102/118 (86.44%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDT 354
LT EYF +G SV+P DVFL FTVDQG N+VNACT LGV VV+CNCHR+NSAV+WALGIAGSATTC+N MG LMKKLAALVGVFS SAVNN MLKE+QRLE DLHR+YEL+RRNDT
Sbjct: 7 LTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT 123
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 187 bits (476), Expect = 3.360e-53 Identity = 92/119 (77.31%), Postives = 102/119 (85.71%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTR 357
LT EYF D +G V+P DVFL FTVDQG N+VNAC LGVPVV+CNCHRVN+AVLWALGIAG+ +NK+MGDLMKKLAALVGVFSHSAVNND LKE+QRLE DLH VY+LIRRNDTR
Sbjct: 341 LTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTR 457
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.490e-49 Identity = 88/119 (73.95%), Postives = 97/119 (81.51%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTR 357
LTLEYF +G SVQP DVFL FTVDQGKNI+NACT LGV VVECNCHR+N+AV+WALGIAG N MG LMKKLAA+VGVFSHSAVNND LKE+QRLE R+YEL+RRNDTR
Sbjct: 343 LTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTR 459
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 175 bits (443), Expect = 3.160e-49 Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTR 357
LTLEYF +G SVQP DVFL FTVDQGKNI+NACT LGV VVECNCHR+N+AV+WALGIAG N MG LMKKLAA+VGVFSHSAVNND LKE+QRLE R+YEL+R NDTR
Sbjct: 148 LTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTR 264
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 159 bits (402), Expect = 3.860e-44 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTR 357
LT E+F D++G +VQP DVFL FTVDQG N+VNAC L V V++CN HR+NS +WALGI GS T +N M LMK+LAA+VGVFSHSAVNND LK+IQRL+ + +YELIRRNDTR
Sbjct: 3 LTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTR 121
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.840e-43 Identity = 79/110 (71.82%), Postives = 88/110 (80.00%), Query Frame = 1
Query: 28 IGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTR 357
+G SV P + FL FTVDQGKNI+NACT L V VVECNCHRVN+AV+WALGIA KN MG LMKKLAA+VGVFSHSAVNND LKE+QRLE R+YEL+RRNDTR
Sbjct: 1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTR 108
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 159 bits (402), Expect = 5.830e-43 Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 1 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTR 357
LT E+F D++G +VQP DVFL FTVDQG N+VNAC L V V++CN HR+NS +WALGI GS T +N M LMK+LAA+VGVFSHSAVNND LK+IQRL+ + +YELIRRNDTR
Sbjct: 331 LTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTR 449 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.145.1 >prot_P-littoralis_Contig8.145.1 ID=prot_P-littoralis_Contig8.145.1|Name=mRNA_P-littoralis_Contig8.145.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=119bp LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVback to top mRNA from alignment at P-littoralis_Contig8:621662..622020+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig8.145.1 ID=mRNA_P-littoralis_Contig8.145.1|Name=mRNA_P-littoralis_Contig8.145.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=359bp|location=Sequence derived from alignment at P-littoralis_Contig8:621662..622020+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig8:621662..622020+ >mRNA_P-littoralis_Contig8.145.1 ID=mRNA_P-littoralis_Contig8.145.1|Name=mRNA_P-littoralis_Contig8.145.1|organism=Pylaiella littoralis U1_48|type=CDS|length=357bp|location=Sequence derived from alignment at P-littoralis_Contig8:621662..622020+ (Pylaiella littoralis U1_48)back to top |