prot_P-littoralis_Contig8.127.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.127.1
Unique Nameprot_P-littoralis_Contig8.127.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length433
Homology
BLAST of mRNA_P-littoralis_Contig8.127.1 vs. uniprot
Match: A0A6H5JLQ0_9PHAE (CS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ0_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 7.640e-128
Identity = 250/341 (73.31%), Postives = 267/341 (78.30%), Query Frame = 0
Query:    4 TENVQEAAAXXXXXXXXXXXXXTSDETSPGEDAAGEL-LGGEVDQWSFLTKAIVAVVVIVAFLIANKVIRGETPEEKRQRLRNERRAQKKA-AGDGPDEIDRLLSSIVRRQPGQAPPPGSVPVSGRGAGRGMPPGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADNRPKLRWDQSNEEVEIIIRVDPKVVRSDVKVEVTGTALKLYLRNQPIIAGHLFQPVDPEGCTWQIDNPGPGHPKEVTITLLKAEPAKNRESWWRAPLKGLENRRPAPKPADPEMVRKAIEAIKAKSAAGGGGAKLSAKPGLAAAGVGAGGRQQVPPG 342
            TENVQEAA XXXXXXXXXXXXX     SPGED   E+ L GE DQWSFLTKA VAV+VI+  LIANKVIRGETPEEKR RLRN+RRA+KKA + + PDEIDRLLSSIVRRQPGQ PPPG+VP+S   A R +P G AGR            XXXXXXXXXXX                  GA DNRPKLRWDQSNEEVEIIIRVDPKV RSDVKVEVTGT LKL LRNQP+IAG+LF+PVDPEGCTWQID+PGPG PKEVTITLLKAEPAK+RE+WWRAPLKGLE RRPAPKPADPEMVRKAIEAIKAKSAAGGG  KL+AKPG A  G G  G QQ  PG
Sbjct:    3 TENVQEAAXXXXXXXXXXXXXXXXX-ASPGEDDVEEMILSGEQDQWSFLTKAAVAVLVIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKADSKNEPDEIDRLLSSIVRRQPGQDPPPGAVPISAHVAARSVPDGGAGRGAGPASPAAPRTXXXXXXXXXXXAVGGRRGAPPP-------GAVDNRPKLRWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDDPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVRKAIEAIKAKSAAGGG-TKLTAKPGPAKVGAGGRGGQQAAPG 334          
BLAST of mRNA_P-littoralis_Contig8.127.1 vs. uniprot
Match: D8LBI6_ECTSI (CS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI6_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 1.080e-72
Identity = 174/325 (53.54%), Postives = 189/325 (58.15%), Query Frame = 0
Query:    4 TENVQEAAAXXXXXXXXXXXXXTSDETSPGEDAAGEL-LGGEVDQWSFLTKAIVAVVVIVAFLIANKVIRGETPEEKRQRLRNERRAQKKAAGDGPDEIDRLLSSIVRRQPGQAPPPGSVPVSGRGAGRGMPPGAAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADNRPKLRWDQSNEEVEIIIRVDPKVVRSDVKVEVTGTALKLYLRNQPIIAGHLFQPVDPEGCTWQIDNPGPGHPKEVTITLLKAEPAKNRESWWRAPLKGLENRRPAPKPADPEMVRKAIEAIKAKSAAGGGGAKLSAKPGLA 327
            TENVQEAA XXXXXXXXXXXXX   E SPG+D   E+ L GE DQWSFLTKA VAV+VI+  LIANKVIRGETPEEKR RLRN+RRA+KKA                                                                                                   D  NE         P V RSDVKVEVTG+ LKL LRNQP+IAG+LF+PVDPEGCTWQIDNPGPG PKEVTITLLKAEPAK+RE+WWRAPLKGLE RRPAPKPADPEMVR+AIEA  +KSAAGGG  KL+AKPG A
Sbjct:    3 TENVQEAAXXXXXXXXXXXXXXXX-EGSPGKDDVEEMMLSGEQDQWSFLTKAAVAVMVIIVCLIANKVIRGETPEEKRLRLRNQRRAKKKA---------------------------------------------------------------------------------------------------DSKNE---------PDVSRSDVKVEVTGSMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVREAIEAFMSKSAAGGG-PKLTAKPGPA 217          
BLAST of mRNA_P-littoralis_Contig8.127.1 vs. uniprot
Match: A0A7S1D3D5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3D5_CYCTE)

HSP 1 Score: 56.6 bits (135), Expect = 1.860e-5
Identity = 29/90 (32.22%), Postives = 50/90 (55.56%), Query Frame = 0
Query:  182 GAADNRPKLRWDQSNEEVEIIIRVDPKVVRSDVKVEVTGTALKLYLRNQPIIAGHLFQPVDPEGCTWQIDNPGPGHPKEVTITLLKAEPA 271
            G A       W Q+ EE+E+ +++   V   DVKV+    ++K+  R++ + A  LF+ +DP+GC W ++    G  K++ IT+ K E A
Sbjct:  146 GVAKAEDGYTWTQTEEELEMTVKLPEGVGSKDVKVKFMPQSIKIQCRSEGLQALKLFERIDPDGCIWTLETAKDGG-KQLVITMEKVEQA 234          
BLAST of mRNA_P-littoralis_Contig8.127.1 vs. uniprot
Match: A8QA32_MALGO (CS domain-containing protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8QA32_MALGO)

HSP 1 Score: 55.5 bits (132), Expect = 1.900e-5
Identity = 28/88 (31.82%), Postives = 47/88 (53.41%), Query Frame = 0
Query:  191 RWDQSNEEVEIIIRVDPKVVRSDVKVEVTGTALKLYLRNQPIIAGHLFQPVDPEGCTWQIDNPGPGHPKEVTITLLKAEPAKNRESWW 278
            RW+Q  + VE+ I + P V    ++V      + + +R + I+ G LF+P+ P+GCTW ID+      K +++ L K     N+  WW
Sbjct:   37 RWNQMLDHVEVSIPLPPDVRARQIQVVFKPAWISVKMREECIVEGALFKPIQPDGCTWTIDDA-----KVLSVHLEKL----NQNEWW 115          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JLQ0_9PHAE7.640e-12873.31CS domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LBI6_ECTSI1.080e-7253.54CS domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A7S1D3D5_CYCTE1.860e-532.22Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A8QA32_MALGO1.900e-531.82CS domain-containing protein n=1 Tax=Malassezia gl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 178..289
e-value: 1.8E-18
score: 68.8
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 182..284
IPR007052CS domainPFAMPF04969CScoord: 188..267
e-value: 1.4E-11
score: 45.1
IPR007052CS domainPROSITEPS51203CScoord: 185..282
score: 15.668908
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..375
NoneNo IPR availableCDDcd06467p23_NUDC_likecoord: 191..282
e-value: 3.72268E-19
score: 79.5138
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 37..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:560346..567993 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.127.1mRNA_P-littoralis_Contig8.127.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 560245..569437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.127.1 ID=prot_P-littoralis_Contig8.127.1|Name=mRNA_P-littoralis_Contig8.127.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=433bp
MSTTENVQEAAAAAAEKLAEAAAAATSDETSPGEDAAGELLGGEVDQWSF
LTKAIVAVVVIVAFLIANKVIRGETPEEKRQRLRNERRAQKKAAGDGPDE
IDRLLSSIVRRQPGQAPPPGSVPVSGRGAGRGMPPGAAGRGAGPAGAAAA
MRTAAAARAAAAGGRGNGTGPAGGRGPPPPPGAADNRPKLRWDQSNEEVE
IIIRVDPKVVRSDVKVEVTGTALKLYLRNQPIIAGHLFQPVDPEGCTWQI
DNPGPGHPKEVTITLLKAEPAKNRESWWRAPLKGLENRRPAPKPADPEMV
RKAIEAIKAKSAAGGGGAKLSAKPGLAAAGVGAGGRQQVPPGSATAAAPG
NGTTARAAPSAPGGSASSPASAASAAATAGRSPGAKAGAAGAGGGGGDAG
AKAVTAAGSPASATQPSQKTGKSGKKKNRKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR007052CS_dom
IPR037898NudC_fam