prot_P-littoralis_Contig8.113.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.113.1
Unique Nameprot_P-littoralis_Contig8.113.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length260
Homology
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BLAST of mRNA_P-littoralis_Contig8.113.1 vs. uniprot
Match: D8LBJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ2_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.520e-16
Identity = 68/126 (53.97%), Postives = 77/126 (61.11%), Query Frame = 0 
Query:  138 STWVFRPPARVSSAEIDAMSRAQAVPNVDPVSSHRTT--EGSSSCNRAGRSNHIGGAEFTVSTQRIKDDSS--VDASFEDETEGGVASAXXXXXXXXRVGSLPSFPRTLPATSTKAPLNKKFAWVP 259
            STW+  PP  V  ++    +   A    +PVSSH  T   GSSSC+    S H  GAEF VS QRI DDS    D+SF +         XXXXXXXXRVG+LPSFPRTLPAT  KAP NKKFAWVP
Sbjct:  108 STWIPNPPVMVRESDTTPKTHNSAA---EPVSSHPPTGASGSSSCH----SRH--GAEFAVSKQRIVDDSDSDTDSSFVEXXXXXXXXXXXXXXXXXRVGALPSFPRTLPATHGKAPFNKKFAWVP 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBJ2_ECTSI1.520e-1653.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:493403..494182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.113.1mRNA_P-littoralis_Contig8.113.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 492982..494897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.113.1 ID=prot_P-littoralis_Contig8.113.1|Name=mRNA_P-littoralis_Contig8.113.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=260bp
MRTAISYSSTNNFLLTLWSILQQTTKTWCSHAGVSFYKFALSFRKYSQTM
PRELTRPQARGSWWRRGGRRAACRGTCPFPPPDFGCQGGAQTIVNGFIAR
RPHTHLLCCAFDSYWVCAIPSLKFPLKNMTAMTRTNRSTWVFRPPARVSS
AEIDAMSRAQAVPNVDPVSSHRTTEGSSSCNRAGRSNHIGGAEFTVSTQR
IKDDSSVDASFEDETEGGVASAGGGGGGGGRVGSLPSFPRTLPATSTKAP
LNKKFAWVP*
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