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Homology
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI) HSP 1 Score: 378 bits (970), Expect = 4.580e-109 Identity = 296/546 (54.21%), Postives = 339/546 (62.09%), Query Frame = 1
Query: 1492 ARGGARSNGSLPFGRGGSTASGPRSRGR-GRGMPAWRGGGGRCGRGGRKAFTSTGASSGGYYNWPLGSRXXXXXXXXPGAWG-YDAGGRLCGGSRSRYPVWAPIAARFRTHPATAARRTAGRWAHPWAGRAAYYWAGRGRXXXXXXXP--FTPAAGRSRKLSQGKPVRYKNRTLIRARSLLPQP--PVVARAALLSGPIAAAAAAXXXRRAXIXXXATFGA-SGRSTKSGKFVRSGKHGMTIRRVNSSDLAARRAAAAATPAS---SPAAKRLKVSIV-STGAHKTAVAGASGKGSGKGVETKRLPTAGVVKAIAGGRSTATGAVSKKASPSSTSASSSKLVLRKAALLSXXXXXXXXXXXXXAVVVAGARAKRSRLQLVRNMTLYRGKGQTAVTGSSXXXXXXXXXXXXXXXXKVHKTSEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSFLKGYCPDGTACRLKHELPDPRKRARDDVIGVEQGGD 3096
ARGGA + S FGRGG+ R+ GR GRG+ AWRG A + G Y P G G W + GR G + S + WAP ARF +P + + AG+W HPWAG W GR XXXXXXX ++ AAGRSR+ + K VR+KNRTLIRARSLLPQ + AA + G +A RRA + F G + S KFVR GKHGM IRRV+SS LA +PAAKRLK+SI T + + A A+G G+ +K P AG KA A +S A+ ++++ S XXXXXXXXXXXXX VVAGARAKR+RLQ+VRNMTLYRGKGQ AV G+ XXXXXXX K KT+EPCLFFCRFGKCSKSDEECRYVHD+ KVAVCRAFLRKGGCDKG+KCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVS+NAAVCP FLKGYCPDGTACRLKHELPDPRKRARD V GGD
Sbjct: 394 ARGGAHCSKSKAFGRGGAVG---RTFGRAGRGVVAWRG----------XXXXXXXAGARGRYKSPRG------LLASQGGWAAWHFNGRGWGRAHSSHSAWAPATARFGAYPTS--QWVAGQWVHPWAG-----WRGRXXXXXXXXXXXLYSSAAGRSRQAPRSKHVRFKNRTLIRARSLLPQQRGAAMTTAATILGAVA--------RRASFGATSRFAKLGGTAASSTKFVRGGKHGMAIRRVDSSALAXXXXXXXXXXXXXXXTPAAKRLKMSIDRKTSSAQDKPARATGDGN---APSKVFPLAGRAKATAVAKS------GVAATQAASAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXAVVAGARAKRTRLQVVRNMTLYRGKGQVAVVGTGKEAASXXXXXXXSN--KKTKTAEPCLFFCRFGKCSKSDEECRYVHDRAKVAVCRAFLRKGGCDKGNKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGYCPDGTACRLKHELPDPRKRARD----VTTGGD 890
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE) HSP 1 Score: 358 bits (919), Expect = 7.190e-102 Identity = 266/499 (53.31%), Postives = 304/499 (60.92%), Query Frame = 1
Query: 1633 KAFTSTGASSGGYYNWPLGSRXXXXXXXXPGAWGYDAGGRLCGGSRSRYPVWAPIAARF---RTHPATAARRTAGRWAHPWAGRAAYYWAGRGRXXXXXXXP------FTPAAGRSRKLSQGKPVRYKNRTLIRARSLLPQP--PVVARAALLSGPIAAAAAAXXXRRAXIXXXATF-GASGRSTKSGKFVRSGKHGMTIRRVNSSDLAARRAAAAATPASSPAAKRLKVSIV-STGAHKTAVAGASGKGSGKGVETKRLPTAGVVKAIAGGRSTATGAVSKKASPSSTSASSSKLVLRKAALLSXXXXXXXXXXXXXAVVVAGARAKRSRLQLVRNMTLYRGKGQTAVTGSSXXXXXXXXXXXXXXXXKVHKTSEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSFLKGYCPDGTACRLKHELPDPRKRARDDVIGVEQG 3090
+ T TGA + G Y P G GAW ++ GR G + S + W P ARF RT P AG+W HPWAG RGRXXXXXXX ++ AAGRSRK + K VR+KNRTLIRARSLLPQ + AA + G +A RRA + F G G + S FVR GKHGM IRRV+SS LAA +PAAKRLK+SI +T + + A A+G G+ +K P A KA A V+K S +A+ XXXXXXXXXXXXX RAKR+RLQ+VRNMTLYRGKGQ AV G+ +KT EPCLFFCRFGKCS+SDEECRYVHD+ KVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVS+NAAVCP FLKG+CPDGTACRLKHELPDPRKRA+DD G + G
Sbjct: 456 RGXTGTGAGARGRYKSPRGLLASQGGW---GAWYFN--GRGWGRAHSGHSAWVPATARFGAYRTSP-----WVAGQWVHPWAGL-------RGRXXXXXXXXXXXXXLYSSAAGRSRKAPRSKHVRFKNRTLIRARSLLPQQRGAAMTTAATILGAVA--------RRASFGATSRFAGLGGTAASSTNFVRGGKHGMAIRRVDSSALAAXXXXXXXXX--TPAAKRLKMSIDRTTSSAQEKPARATGDGN---APSKIFPLAVRAKASA---------VAK----SGVAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKRTRLQVVRNMTLYRGKGQVAVVGTGKEAASAAAAKRKSN----NKTGEPCLFFCRFGKCSRSDEECRYVHDRAKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGHCPDGTACRLKHELPDPRKRAKDDSAGGDHG 907
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A485LIR1_9STRA (Aste57867_21895 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIR1_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.440e-29 Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 2716 SEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSFLKGYCPDGTACRLKHELP 3042
+E C+F+ + G+C K + C +VHD K+A+CR FLR G C G KC L+H + KMP C F KGMC C Y HV VSR+AA+C +F KGYCPDG CRLKHE P
Sbjct: 204 TEYCMFYNKLGECKKKNA-CLFVHDSRKIAICRKFLR-GACHDGAKCKLSHQLDENKMPDCAMFLKGMCTRDGCHYRHVNVSRDAAICEAFHKGYCPDGATCRLKHEFP 310
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A553NNT2_TIGCA (Uncharacterized protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NNT2_TIGCA) HSP 1 Score: 134 bits (336), Expect = 5.040e-29 Identity = 61/117 (52.14%), Postives = 80/117 (68.38%), Query Frame = 1
Query: 2710 KTSEPCLFFCRFGKCSKSDEE-CRYVHDKTKVAVCRAFLRKGGCDKG-DKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSFLKGYCPDGTACRLKHELPDPRK 3054
K+ + C+FF +FG+C K + C Y+HD KVAVCR FL+ G C K D+CLLTH V +KMP C +F+ G C +CPY HVKVS +AA+CP+F +GYCP G AC L+H + D K
Sbjct: 301 KSKQFCMFFNKFGRCQKRAQGLCPYLHDPAKVAVCRRFLQ-GSCPKAADECLLTHKVSPDKMPACKFFQLGQCGRDHCPYNHVKVSADAALCPAFRQGYCPQGQACTLRHAMSDQTK 416
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A194WT69_9HELO (Uncharacterized protein n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A194WT69_9HELO) HSP 1 Score: 122 bits (307), Expect = 3.910e-26 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 2704 VHKTSEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSF-LKGYCPDGTAC--RLKHELPD 3045
+ K EPC F G C+K + CRY+HD +KVAVC+ FL KG C GDKC L+H + E+ P C++F KG C PNC Y HV+VS +A VC +F + GYC GT+C R HE PD
Sbjct: 190 LQKIQEPCRAFTTTGSCNKGPK-CRYIHDPSKVAVCKKFL-KGSCPSGDKCDLSHELTPERTPTCLHFAKGNCSKPNCQYPHVRVSPSALVCRAFGIYGYCEKGTSCTERHVHECPD 304
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A8J4PM82_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PM82_9MYCE) HSP 1 Score: 123 bits (308), Expect = 1.880e-25 Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 2710 KTSEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAV-QAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSFLKGYCPDGTACRLKH 3033
K + CL++ RFGKC+ D+ C+Y+HDK+K+ C FL G C + C L H + E+MP+C + KGMC NCPYLHV VS+NA +CP F KGYCP+G+AC +KH
Sbjct: 343 KKKQYCLYYNRFGKCNSGDK-CKYIHDKSKIRTCPKFL-SGTCQDSE-CHLKHEITDLEQMPICYLYLKGMCTKVNCPYLHVFVSKNAKLCPDFQKGYCPNGSACTMKH 448
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A420J3P1_9PEZI (Zinc finger CCCH domain-containing protein 3 n=4 Tax=Golovinomyces TaxID=184027 RepID=A0A420J3P1_9PEZI) HSP 1 Score: 122 bits (307), Expect = 2.190e-25 Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 2704 VHKTSEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSF-LKGYCPDGTACRLKH--ELPD 3045
V K EPC F G C K + CRY+H+ +KVAVC+ +L+KG C GD C L+H + E+ P C++F +G C P+CPY HV+VS +A VC F + GYC GTAC +H E PD
Sbjct: 313 VKKVDEPCNIFSTTGSCHKGPQ-CRYIHNPSKVAVCKEYLQKGSCLNGDNCDLSHELTPERTPSCVHFGRGNCSKPSCPYTHVRVSSSALVCRRFAIYGYCEKGTACMERHVVECPD 428
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A2V1CF14_9HELO (Uncharacterized protein n=1 Tax=Cadophora sp. DSE1049 TaxID=1485229 RepID=A0A2V1CF14_9HELO) HSP 1 Score: 117 bits (294), Expect = 2.900e-24 Identity = 56/118 (47.46%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 2701 KVHKTSEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSF-LKGYCPDGTACRLKH--ELPD 3045
K KT++PC F G CS D C +VHD +KVAVCR FL+KG C G+ C L+H + E+ P+C++F +G C NC Y HV+VS +A VC SF + GYC G +C +H E PD
Sbjct: 219 KAKKTTKPCKAFNITGSCSAPD--CPFVHDPSKVAVCRDFLQKGSCPSGESCDLSHELTPERTPICLHFARGNCSNGNCRYTHVRVSPSALVCRSFGIYGYCEKGASCTDRHVNECPD 334
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A7S1I654_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I654_9EUGL) HSP 1 Score: 118 bits (296), Expect = 8.310e-24 Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 2710 KTSEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVC-IYFEKGMCFTPNCPYLHVKVSRNAAVCPSFLKGYCPDGTACRLKHE 3036
K E C+F+ RFG C K +C+Y+HD KVAVCR FL G C D C L H + KMP C I+ G+CF CPYLHVKVS +A VCP+F KG+CP G AC+ +HE
Sbjct: 410 KGREYCIFYNRFGAC-KRGADCKYIHDPQKVAVCRRFLL-GECTAAD-CPLWHKLDQAKMPHCKIFITTGLCFRKQCPYLHVKVSPDAPVCPAFQKGHCPKGEACKKRHE 516
BLAST of mRNA_P-littoralis_Contig8.91.4 vs. uniprot
Match: A0A1Q8RWA7_9PEZI (Zinc finger CCCH domain-containing protein n=1 Tax=Colletotrichum chlorophyti TaxID=708187 RepID=A0A1Q8RWA7_9PEZI) HSP 1 Score: 116 bits (290), Expect = 1.190e-23 Identity = 55/117 (47.01%), Postives = 67/117 (57.26%), Query Frame = 1
Query: 2704 VHKTSEPCLFFCRFGKCSKSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYFEKGMCFTPNCPYLHVKVSRNAAVCPSF-LKGYCPDGTACRLKH--ELPD 3045
V K PC F G C+K CRY+HD ++VAVCR L KG C G+ C L+H + ++ P C++F KG C PNCPY H VS A VC SF L GYC G C +H E PD
Sbjct: 239 VKKVDVPCSMFSLTGSCAKGPA-CRYIHDASRVAVCREMLHKGDCSNGESCDLSHDLTPQRTPTCVHFIKGNCAKPNCPYAHSSVSPGALVCRSFGLYGYCDKGDECSERHVFECPD 354
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LB82 |
| Preferred name | ZC3H3 |
| PFAMs | zf-CCCH |
| Model size | 3731 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K06093 |
| KEGG Pathway | ko04015,ko04144,ko04360,ko04390,ko04391,ko04530,ko05165,map04015,map04144,map04360,map04390,map04391,map04530,map05165 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000981,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005847,GO:0005849,GO:0006139,GO:0006355,GO:0006357,GO:0006378,GO:0006379,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010646,GO:0010647,GO:0010793,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0016973,GO:0019219,GO:0019222,GO:0023051,GO:0023056,GO:0031123,GO:0031124,GO:0031323,GO:0031326,GO:0031503,GO:0031974,GO:0031981,GO:0032239,GO:0032386,GO:0032879,GO:0032880,GO:0032925,GO:0032927,GO:0032991,GO:0033036,GO:0033157,GO:0034613,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0046332,GO:0046483,GO:0046822,GO:0046825,GO:0046831,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051049,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051252,GO:0051641,GO:0051649,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070201,GO:0070412,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0090087,GO:0090092,GO:0090100,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0098787,GO:0098789,GO:0140098,GO:0140110,GO:1901360,GO:1901363,GO:1903506,GO:1903827,GO:2000112,GO:2000197,GO:2001141 |
| Exons | 4 |
| Evalue | 1.88e-110 |
| EggNOG OGs | COG5084@1|root,KOG1492@2759|Eukaryota |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-27_004850.1 |
| Description | zinc finger |
| Cds size | 3480 |
| COG category | J |
| BRITE | ko00000,ko00001,ko03036 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791635.6300242-UTR-P-littoralis_Contig8:420884..420941 | 1680791635.6300242-UTR-P-littoralis_Contig8:420884..420941 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 420885..420941 + |
| 1680791635.6999843-UTR-P-littoralis_Contig8:426667..426861 | 1680791635.6999843-UTR-P-littoralis_Contig8:426667..426861 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 426668..426861 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791635.6423733-CDS-P-littoralis_Contig8:420941..423878 | 1680791635.6423733-CDS-P-littoralis_Contig8:420941..423878 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 420942..423878 + |
| 1680791635.6528563-CDS-P-littoralis_Contig8:424322..424418 | 1680791635.6528563-CDS-P-littoralis_Contig8:424322..424418 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 424323..424418 + |
| 1680791635.6666906-CDS-P-littoralis_Contig8:424855..424916 | 1680791635.6666906-CDS-P-littoralis_Contig8:424855..424916 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 424856..424916 + |
| 1680791635.6798425-CDS-P-littoralis_Contig8:426281..426667 | 1680791635.6798425-CDS-P-littoralis_Contig8:426281..426667 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 426282..426667 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.91.4 >prot_P-littoralis_Contig8.91.4 ID=prot_P-littoralis_Contig8.91.4|Name=mRNA_P-littoralis_Contig8.91.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1160bp
MVVLAYSRGRGRVNATGRGGRSFSTSSRGRGRGRSLTWTRPDAPSNTSPP LCSTQRAPPPVGRPATIPRASARLPRDPIVAAVTAAAPRAGGNNRIWINK EGRVSDRGGDRGTNSSSRATLPQRPTTMRRPSAVAAATAPALAVPNHHSP HGSSAAFSKMPKSVNRVWKNTSSGSSSSTAQNAVVGITTALGGGEASAGG DTNKAASLSKSKPAVSGTGMGRALSSSASAAPRNNRGNLVWTKAGPGGAA GTISRTRISVVNRPSVPAETAVSSKAPRPAQVGPAAGSAPVTGGAAGSLS QILASPPAFIVASSKTPAAVRPNSATAVVSSSLSPTRKRPVSRYSGSTGR DLISKGQQLKATAKVGAAASAPAAAAPAVARLITKRVARYSGSASLQLQA QQQLKSAATAAGAPARRGGTAATAAAPAPATSPASQFPAPTKPVVRYSGL VAGQQPKAASSKHENAAGQQQVARYSGAARGGARSNGSLPFGRGGSTASG PRSRGRGRGMPAWRGGGGRCGRGGRKAFTSTGASSGGYYNWPLGSRRGLP AWRGPGAWGYDAGGRLCGGSRSRYPVWAPIAARFRTHPATAARRTAGRWA HPWAGRAAYYWAGRGRGRGRGRGPFTPAAGRSRKLSQGKPVRYKNRTLIR ARSLLPQPPVVARAALLSGPIAAAAAAAAARRAAIARRATFGASGRSTKS GKFVRSGKHGMTIRRVNSSDLAARRAAAAATPASSPAAKRLKVSIVSTGA HKTAVAGASGKGSGKGVETKRLPTAGVVKAIAGGRSTATGAVSKKASPSS TSASSSKLVLRKAALLSKARARSSVAARKAAVVVAGARAKRSRLQLVRNM TLYRGKGQTAVTGSSSGGGKRAAAAAVAKKKKVHKTSEPCLFFCRFGKCS KSDEECRYVHDKTKVAVCRAFLRKGGCDKGDKCLLTHAVQAEKMPVCIYF EKGMCFTPNCPYLHVKVSRNAAVCPSFLKGYCPDGTACRLKHELPDPRKR ARDDVIGVEQGGDDDKATSSKKRKTEPASEKDGVRSPSSSSSSPSTAATE VGGSYEGKSGESGLRSPKRAAPPPVGGSGGRGVGPVGVAVLASGDASTAA AAAAAAAFAAGGGLSPPPPQKGLVEEGVDWKPEALQGADDDDDDDDDLKP VFLRKRKRK* back to topmRNA from alignment at P-littoralis_Contig8:420885..426861+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig8.91.4 ID=mRNA_P-littoralis_Contig8.91.4|Name=mRNA_P-littoralis_Contig8.91.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=5977bp|location=Sequence derived from alignment at P-littoralis_Contig8:420885..426861+ (Pylaiella littoralis U1_48) GTGCGTATGTAGCCACTGCAGCACTACGGCACGGACTAAAGGACGAACAA
GGGAAGGATGGTGGTCCTCGCCTACTCTAGAGGGAGAGGTCGAGTGAATG
CCACCGGAAGGGGCGGTCGCTCCTTCTCCACCTCTTCACGCGGTCGAGGT
CGTGGTAGGAGTTTAACTTGGACACGTCCTGATGCACCTTCAAATACGTC
ACCTCCTCTTTGTAGCACCCAAAGAGCGCCTCCCCCAGTGGGGAGACCCG
CAACAATTCCTCGTGCTAGCGCTCGTTTACCGCGAGACCCGATCGTCGCC
GCCGTCACCGCCGCCGCTCCAAGAGCCGGAGGGAACAACAGGATTTGGAT
CAACAAAGAAGGTCGGGTTTCGGACCGTGGAGGCGACAGGGGGACGAACA
GCAGTTCTAGGGCAACGTTGCCTCAGCGACCGACGACAATGCGCCGACCG
TCCGCAGTAGCCGCCGCCACGGCACCGGCGCTAGCGGTTCCGAACCATCA
CTCGCCTCACGGCAGCAGTGCCGCTTTCAGCAAGATGCCCAAATCAGTCA
ACCGCGTGTGGAAAAATACAAGTAGTGGTAGCAGCAGTAGCACCGCCCAG
AATGCGGTCGTCGGAATAACTACTGCGCTTGGCGGCGGTGAGGCCTCCGC
AGGCGGCGACACCAACAAAGCGGCGAGTCTCAGCAAATCGAAGCCTGCTG
TTTCAGGGACAGGAATGGGGCGGGCTCTGTCGTCTAGCGCATCTGCGGCA
CCAAGAAATAATCGTGGAAACCTCGTCTGGACCAAAGCGGGACCAGGAGG
AGCCGCTGGCACCATTTCTCGCACAAGAATTTCCGTTGTAAATCGGCCAT
CCGTACCTGCGGAGACAGCAGTCAGCAGCAAGGCCCCACGACCAGCGCAG
GTGGGACCAGCAGCTGGTTCGGCACCAGTTACCGGAGGTGCGGCAGGTTC
CTTGAGTCAAATATTGGCCTCTCCGCCGGCATTTATCGTTGCGTCGTCGA
AGACGCCCGCCGCCGTGCGGCCGAACTCCGCCACTGCAGTTGTTTCTTCA
TCACTTTCTCCGACAAGGAAGAGGCCAGTTTCGCGATATTCGGGTTCGAC
TGGACGAGATTTAATTAGTAAAGGTCAACAATTGAAAGCAACCGCCAAGG
TGGGCGCTGCTGCTTCTGCTCCCGCTGCTGCTGCTCCAGCTGTTGCACGT
CTCATCACGAAACGAGTTGCGCGATATTCAGGATCAGCCAGCCTGCAATT
GCAAGCCCAACAACAACTGAAATCCGCCGCCACAGCTGCGGGCGCCCCAG
CACGAAGAGGTGGGACTGCTGCTACTGCTGCGGCTCCGGCTCCGGCTACC
AGTCCTGCTAGTCAGTTCCCCGCTCCCACAAAACCGGTTGTACGGTATTC
GGGTTTGGTCGCGGGGCAACAACCGAAAGCCGCGTCATCGAAGCATGAAA
ACGCAGCAGGGCAGCAGCAAGTAGCTCGGTACTCAGGGGCAGCACGAGGC
GGCGCTCGAAGTAATGGCAGCCTACCGTTCGGCAGGGGAGGCAGCACCGC
GAGCGGGCCCCGAAGCAGGGGCAGGGGCAGGGGTATGCCCGCTTGGCGAG
GAGGAGGAGGGAGATGCGGGAGAGGAGGGAGAAAGGCGTTCACGAGCACA
GGCGCAAGCTCCGGGGGGTACTACAACTGGCCGCTGGGGTCACGGCGAGG
CTTGCCTGCCTGGCGAGGACCGGGAGCGTGGGGTTACGACGCTGGGGGGA
GACTTTGTGGGGGATCGCGTTCGAGATACCCGGTATGGGCGCCCATAGCG
GCACGCTTCAGGACGCATCCCGCTACTGCTGCTCGACGAACAGCGGGGCG
CTGGGCGCACCCGTGGGCCGGTCGTGCTGCTTACTATTGGGCAGGGCGCG
GACGGGGACGAGGGCGAGGGCGAGGTCCGTTTACCCCAGCAGCCGGCCGT
TCTCGAAAATTATCCCAGGGCAAACCAGTGCGGTACAAGAACCGGACTCT
CATTCGCGCCCGCAGTCTTCTACCGCAGCCGCCGGTGGTGGCACGGGCGG
CCTTGCTCTCAGGACCTATTGCCGCCGCCGCGGCCGCCGCCGCTGCACGG
CGTGCTGCCATTGCCCGGCGTGCTACTTTTGGCGCAAGCGGCCGATCGAC
AAAATCAGGGAAATTCGTCCGCAGTGGCAAGCACGGCATGACGATTCGGA
GAGTCAACAGCTCTGATCTGGCGGCCCGCCGAGCCGCTGCAGCCGCCACC
CCTGCCTCAAGTCCCGCAGCGAAGAGGCTCAAGGTCTCGATCGTTAGCAC
CGGCGCGCACAAGACGGCGGTGGCCGGGGCCTCGGGTAAAGGCTCGGGTA
AAGGAGTAGAGACAAAAAGATTGCCAACAGCAGGAGTAGTAAAGGCGATT
GCCGGGGGAAGGTCCACCGCCACTGGGGCAGTTTCCAAGAAAGCATCTCC
ATCTTCAACATCGGCGTCATCGTCGAAGCTGGTCTTGCGAAAGGCGGCGC
TGCTAAGCAAGGCTCGCGCGCGAAGCAGCGTGGCGGCGAGGAAGGCGGCG
GTGGTGGTGGCCGGTGCGCGCGCCAAGCGGTCTCGCCTGCAGCTTGTTCG
CAACATGACGCTGTACCGCGGGAAGGGACAGACAGCCGTCACTGGCAGCA
GCAGCGGCGGGGGCAAGAGGGCGGCGGCGGCAGCAGTAGCGAAGAAGAAG
AAGGTACACAAGACGTCGGAGCCGTGCCTGTTTTTCTGCAGGTTCGGCAA
GTGTTCCAAGTCGGACGAGGAGTGCCGTTACGTCCACGACAAGACCAAGG
TGGCGGTGTGCCGTGCGTTCCTGAGGAAAGGCGGGTGCGACAAGGGGGAT
AAGTGCCTCCTGACGCACGCCGTCCAGGCCGAAAAGATGCCGGTCTGCAT
CTACTTCGAGAAGGGCATGTGCTTCACGCCTAACTGCCCCTACCTGCACG
TGAAAGTCAGCCGGAATGCGGCCGTCTGCCCCAGCTTCTTGAAGGTTGGT
TGAAAGTGGATGTTGTTTACGTGTAGACTATGTACCCCCCCCCCCCCCCC
CCGTTTTGCTGCTGCTGTGCAGTCTGATTGCCGATCAGCCAGTTGATTCG
TAAGGAACGGGGGGGTGCGTGGGTCGGTTGGGTTTGTTCACTTGCACTCT
CATGCACAAAGTGTATTTCTTAATTTTGGTGGTCTGGTCTGTAGGGCGTA
TCATTTCAAGATCTCGTTATCCCATTCCCGCGTTTATATGTATCCTGAAA
CTCCCAGTCACAAATTCCCCCCTTTTCGTCTCTTTGCGTTTTATTTATTT
ACTTTCCTATCTCGTCTGTTTGTCTGTCGCGCACCTTGCTATGTTCTTGT
TCTGTACTCCTGTGCCTTTGGTTATTTGTTGACGCTGCTCGTCGTCGACA
AACCAACGATGGGACAACGAAAATAACGATGCTCACAGGGCTACTGTCCG
GATGGAACCGCCTGCAGACTCAAGCACGAGCTTCCAGACCCCCGAAAGCG
GGCGAGAGATGACGTCATCGGAGTCGAGCAGGGCGTGAGAACACATGCAG
TAGATTGTAGTCTCCTGTAGTCCAAGAGGCTTTTTCTTTCTTTGATCCCC
AGTTGAAATCGTACCTGTTAGTATTGCGTGTACTTTGCTGCTGCTGCTGC
TGCTGCTGCTACTGCTACGATGGTTTTCAACCATTTTGCTGTGTGTGTGT
TTCTTCTGAAGTGCACGATTCGCATTTCGACGGGTATAAAATATATCTCA
ATGCCGGACTTCTTAGTCCACGTCGGGTGTTGATTTCGCTTTAGTGAAAA
CGTTCTGTTGGGAGTGCTCTCACGATCTTGAGCCTTTTCGCTTTGCCGCT
ACCATCCCACCCACCAAGCCACCCACCCCCCGACCCCACCCACTTCTGTC
CTGCCGGCGGATGCGTGTTGTCCGTTTTTTTCATGTCCTTGGGGGTTAAT
GCCATGTGTTTCACATCAAAGGGTGACGACGACAAGGCCACTAGCAGCAA
GAAGAGGAAGACCGAACCGGCTTCGGAGAAAGGTTCGGAAACTCACGCCT
TTTTTTTAATCTAATCCAACGAGCAAGGAACTGGATTTTATTTCTTCGCA
ACTGCATCAGTTTGGTGATCGCAACCTCCCGCCGCCCCACCACGCCACGC
CACGCCAAGCTCCGTTGCGCTTCACCCCCCCCACCCCCTCGACCCATTTC
CCTGTGTAGAGACACGCTCCCGAAGAAACGCTTCCTTACACGTGGAACAG
AAAAAAAAATGGAACGACCCATGATTCGAAGTATTGTTTTGCTTCGTGTG
GTTGGTTAAAAGTTCTCGTGCTCACGGTCCTCTCTTGCATGCTTCAGTAG
CGCCAGAGGGGGGGGGGTGAATACGAAGAGTTTTTGGGTGATGCTGCTTG
ACGCTACCTCGCCTGAGGCACGGGTACCGCATTTTCGTGTGGGGGCAATC
CGTGGCAGATGACTGGCTTGTCCTGACTGTGTGCCTTGTTTTTGTATTGT
CCTGTTTGCGGATTCCATTGTCGCTGCAACTCGCTCATGGTCAGGCGTTC
GTGAAGATCGACAGCGTGCGCGCGTGCCTGCGTCCCCCTCCTCCCCCCCC
CGTGTAAACCCTGGCTGGCGTAGCCCGGCGTGTGTTGTCACGCAGCCAAG
CGGAAATAGCCTAGCTTGTCCCCTGTTAAGTCTCCCTTTTTTCTCCCTCA
TCTCGTcCCCCCCCCCCCCCCTCCCCCCCTCCTATTGCCCTCCCCCTCGT
TTCATGCCATCTTCCCACCCCCGACCGCTGTGTGCGTTTGTATTTGGCCG
TACGTTCTCCTCCTCGTCACTACTCCGGCATCATTCATGTATGTCCTGCT
GCTCCCTGCTCCTTTTCTCGGCGGGTGTCCTGTACTCCCGTCTCGATTCG
GCTCATGGCTGTGGCGCACTTGTACCCTCTCGGTTTATCTCGGATTAATT
GGCTTCGAAACAAAACGAAACATAACGAAACCCCGTGCGGTAAAATGAAA
ACGGGCCTTCCCCGTCTCTAAATCTTTCTCGCTTTTGGTGCTATTTGGTG
TGATCAATTTTTCGTGGGTCGGTTTGGGTGATGGATCGTTCTGTCCGCTA
CCCCCCCCCCTGTCTCGTGCGGTCGGGCCCAATCTATTTTCGCGCTTTTC
CTGAATCTCCGCACGTTACCTGCGTGCGTGCGTATCGGGGTGTGGGTGTG
TGGGTCCGGGCGGCTACTCTCGCGTTGTTAACCGGCACGTCCACGCCCGC
GTCCAATTCGTTCGCGGTTTTCCATGCGCGCCCGCCCCGCCCCCCCCCAT
CCCACGGACGACCCTTCCTGGTTGGTCGGGGGTGGTTTGTTCGTTCGTTC
GTTCGTCGTGGTCTTTGATGGTGTGGTTTTTTGTTATCGTTGTGCAGACG
GAGTGAGGTCTCCATCTTCATCTTCTTCGTCACCGTCAACGGCGGCAACG
GAGGTCGGCGGTTCTTACGAAGGTAAGTCAGGTGAGTCGGGTTTACGGTC
GCCAAAAAGAGCAGCGCCGCCCCCGGTAGGGGGGAGCGGTGGGCGGGGCG
TGGGGCCGGTCGGGGTGGCGGTCCTGGCGTCCGGAGATGCTTCTACTGCT
GCTGCTGCTGCTGCTGCTGCTGCTTTTGCTGCCGGGGGCGGGCTGTCGCC
GCCGCCGCCGCAGAAGGGCCTGGTTGAGGAAGGGGTGGACTGGAAACCGG
AGGCATTACAAGGTGCAGACGACGACGACGATGATGATGATGATCTGAAG
CCAGTTTTTCTCCGGAAGCGGAAACGAAAGTAGTTGCCTTGAGATTTTGA
GTGTTTTGGAGATGCGCAACCAGTCGAGCCATCTTGAAGCTTGGAGAACG
GAATCGTGGGTCGAAGTGGGGGGGGGTCGTAAATGGTTTTGTCGCGTCAG
ACATGGTGGTGGCTCGGTCTTGAACTGCACACGGAAGAGAGGTGGTTGAC
ACGCGGGTCGTGTATTCTAGAGGAACG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig8:420885..426861+ >mRNA_P-littoralis_Contig8.91.4 ID=mRNA_P-littoralis_Contig8.91.4|Name=mRNA_P-littoralis_Contig8.91.4|organism=Pylaiella littoralis U1_48|type=CDS|length=3480bp|location=Sequence derived from alignment at P-littoralis_Contig8:420885..426861+ (Pylaiella littoralis U1_48) ATGGTGGTCCTCGCCTACTCTAGAGGGAGAGGTCGAGTGAATGCCACCGG AAGGGGCGGTCGCTCCTTCTCCACCTCTTCACGCGGTCGAGGTCGTGGTA GGAGTTTAACTTGGACACGTCCTGATGCACCTTCAAATACGTCACCTCCT CTTTGTAGCACCCAAAGAGCGCCTCCCCCAGTGGGGAGACCCGCAACAAT TCCTCGTGCTAGCGCTCGTTTACCGCGAGACCCGATCGTCGCCGCCGTCA CCGCCGCCGCTCCAAGAGCCGGAGGGAACAACAGGATTTGGATCAACAAA GAAGGTCGGGTTTCGGACCGTGGAGGCGACAGGGGGACGAACAGCAGTTC TAGGGCAACGTTGCCTCAGCGACCGACGACAATGCGCCGACCGTCCGCAG TAGCCGCCGCCACGGCACCGGCGCTAGCGGTTCCGAACCATCACTCGCCT CACGGCAGCAGTGCCGCTTTCAGCAAGATGCCCAAATCAGTCAACCGCGT GTGGAAAAATACAAGTAGTGGTAGCAGCAGTAGCACCGCCCAGAATGCGG TCGTCGGAATAACTACTGCGCTTGGCGGCGGTGAGGCCTCCGCAGGCGGC GACACCAACAAAGCGGCGAGTCTCAGCAAATCGAAGCCTGCTGTTTCAGG GACAGGAATGGGGCGGGCTCTGTCGTCTAGCGCATCTGCGGCACCAAGAA ATAATCGTGGAAACCTCGTCTGGACCAAAGCGGGACCAGGAGGAGCCGCT GGCACCATTTCTCGCACAAGAATTTCCGTTGTAAATCGGCCATCCGTACC TGCGGAGACAGCAGTCAGCAGCAAGGCCCCACGACCAGCGCAGGTGGGAC CAGCAGCTGGTTCGGCACCAGTTACCGGAGGTGCGGCAGGTTCCTTGAGT CAAATATTGGCCTCTCCGCCGGCATTTATCGTTGCGTCGTCGAAGACGCC CGCCGCCGTGCGGCCGAACTCCGCCACTGCAGTTGTTTCTTCATCACTTT CTCCGACAAGGAAGAGGCCAGTTTCGCGATATTCGGGTTCGACTGGACGA GATTTAATTAGTAAAGGTCAACAATTGAAAGCAACCGCCAAGGTGGGCGC TGCTGCTTCTGCTCCCGCTGCTGCTGCTCCAGCTGTTGCACGTCTCATCA CGAAACGAGTTGCGCGATATTCAGGATCAGCCAGCCTGCAATTGCAAGCC CAACAACAACTGAAATCCGCCGCCACAGCTGCGGGCGCCCCAGCACGAAG AGGTGGGACTGCTGCTACTGCTGCGGCTCCGGCTCCGGCTACCAGTCCTG CTAGTCAGTTCCCCGCTCCCACAAAACCGGTTGTACGGTATTCGGGTTTG GTCGCGGGGCAACAACCGAAAGCCGCGTCATCGAAGCATGAAAACGCAGC AGGGCAGCAGCAAGTAGCTCGGTACTCAGGGGCAGCACGAGGCGGCGCTC GAAGTAATGGCAGCCTACCGTTCGGCAGGGGAGGCAGCACCGCGAGCGGG CCCCGAAGCAGGGGCAGGGGCAGGGGTATGCCCGCTTGGCGAGGAGGAGG AGGGAGATGCGGGAGAGGAGGGAGAAAGGCGTTCACGAGCACAGGCGCAA GCTCCGGGGGGTACTACAACTGGCCGCTGGGGTCACGGCGAGGCTTGCCT GCCTGGCGAGGACCGGGAGCGTGGGGTTACGACGCTGGGGGGAGACTTTG TGGGGGATCGCGTTCGAGATACCCGGTATGGGCGCCCATAGCGGCACGCT TCAGGACGCATCCCGCTACTGCTGCTCGACGAACAGCGGGGCGCTGGGCG CACCCGTGGGCCGGTCGTGCTGCTTACTATTGGGCAGGGCGCGGACGGGG ACGAGGGCGAGGGCGAGGTCCGTTTACCCCAGCAGCCGGCCGTTCTCGAA AATTATCCCAGGGCAAACCAGTGCGGTACAAGAACCGGACTCTCATTCGC GCCCGCAGTCTTCTACCGCAGCCGCCGGTGGTGGCACGGGCGGCCTTGCT CTCAGGACCTATTGCCGCCGCCGCGGCCGCCGCCGCTGCACGGCGTGCTG CCATTGCCCGGCGTGCTACTTTTGGCGCAAGCGGCCGATCGACAAAATCA GGGAAATTCGTCCGCAGTGGCAAGCACGGCATGACGATTCGGAGAGTCAA CAGCTCTGATCTGGCGGCCCGCCGAGCCGCTGCAGCCGCCACCCCTGCCT CAAGTCCCGCAGCGAAGAGGCTCAAGGTCTCGATCGTTAGCACCGGCGCG CACAAGACGGCGGTGGCCGGGGCCTCGGGTAAAGGCTCGGGTAAAGGAGT AGAGACAAAAAGATTGCCAACAGCAGGAGTAGTAAAGGCGATTGCCGGGG GAAGGTCCACCGCCACTGGGGCAGTTTCCAAGAAAGCATCTCCATCTTCA ACATCGGCGTCATCGTCGAAGCTGGTCTTGCGAAAGGCGGCGCTGCTAAG CAAGGCTCGCGCGCGAAGCAGCGTGGCGGCGAGGAAGGCGGCGGTGGTGG TGGCCGGTGCGCGCGCCAAGCGGTCTCGCCTGCAGCTTGTTCGCAACATG ACGCTGTACCGCGGGAAGGGACAGACAGCCGTCACTGGCAGCAGCAGCGG CGGGGGCAAGAGGGCGGCGGCGGCAGCAGTAGCGAAGAAGAAGAAGGTAC ACAAGACGTCGGAGCCGTGCCTGTTTTTCTGCAGGTTCGGCAAGTGTTCC AAGTCGGACGAGGAGTGCCGTTACGTCCACGACAAGACCAAGGTGGCGGT GTGCCGTGCGTTCCTGAGGAAAGGCGGGTGCGACAAGGGGGATAAGTGCC TCCTGACGCACGCCGTCCAGGCCGAAAAGATGCCGGTCTGCATCTACTTC GAGAAGGGCATGTGCTTCACGCCTAACTGCCCCTACCTGCACGTGAAAGT CAGCCGGAATGCGGCCGTCTGCCCCAGCTTCTTGAAGGGCTACTGTCCGG ATGGAACCGCCTGCAGACTCAAGCACGAGCTTCCAGACCCCCGAAAGCGG GCGAGAGATGACGTCATCGGAGTCGAGCAGGGCGGTGACGACGACAAGGC CACTAGCAGCAAGAAGAGGAAGACCGAACCGGCTTCGGAGAAAGACGGAG TGAGGTCTCCATCTTCATCTTCTTCGTCACCGTCAACGGCGGCAACGGAG GTCGGCGGTTCTTACGAAGGTAAGTCAGGTGAGTCGGGTTTACGGTCGCC AAAAAGAGCAGCGCCGCCCCCGGTAGGGGGGAGCGGTGGGCGGGGCGTGG GGCCGGTCGGGGTGGCGGTCCTGGCGTCCGGAGATGCTTCTACTGCTGCT GCTGCTGCTGCTGCTGCTGCTTTTGCTGCCGGGGGCGGGCTGTCGCCGCC GCCGCCGCAGAAGGGCCTGGTTGAGGAAGGGGTGGACTGGAAACCGGAGG CATTACAAGGTGCAGACGACGACGACGATGATGATGATGATCTGAAGCCA GTTTTTCTCCGGAAGCGGAAACGAAAGTAG back to top
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