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Homology
BLAST of mRNA_P-littoralis_Contig8.77.1 vs. uniprot
Match: A0A6H5KLQ2_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ2_9PHAE) HSP 1 Score: 910 bits (2353), Expect = 1.650e-304 Identity = 704/1538 (45.77%), Postives = 805/1538 (52.34%), Query Frame = 1
Query: 139 SDRAACPTAAGSPTRRESPYDVGEYIIHSTSPPAPPPRAIELIKEEVHRALKAFSTRPLKGETDAPVPSDLLRPFDVSLDGRVTYREFKAGVLGLGVGLTGQEAELLARAVDGEDTGLVDRGRFEAAATQDWGRSS--GGCE-RPTSAPAPVVATPDASRCDGEAAPLPGE*KEKQEVESRRRAIDIISGIRDGEKGYCCADGEEQLXXXXXXXXXXXXXXXXXXXRSEPMATNSAVRSSPAVSFEHWQRHQTTTPAAGGSGSDSNGAEA--AATAASIARSNGSRSIGNKSARHERSQSCK-----------------NSSGMKRPMSQQNVHSLNTLRSLLRQDGVFEADDPAVTADRTNYDSSHRRRCSFDTEKEGRDRRDRRLHERQQHYHRPRFRQDAGHRTDEGGGRGRGXXXXXXXXARKEQGLAR----------------------------------------------------RRAATAARAENILWLRSRGDLVGLRRAMSKADPSASGVVSQREMERVVLRRFGTGLSDDEARELAALNRKEHNGRSMVDYNRLFDTLEAKEAGFFG-------GPAGAAFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLLSPSREDGKDKDKRAATTSGS----------TKPAAGSRTRYSQRRYSRRGVPECDAAVGGSGGEKIRVEESQLVRRARSKTLALLDRHGTLSVDCIFGLVDPAHTQSVSSGQLREGLRILGGSDTLSEAEHRALFRDISKGNDRVQYR---------------------------------------ELLDTLRLAEAAENRERTQRKLAHQAGLPASGRGSASHWRHSDILDWDVPPAGGGNRDGPSRVGLTGGRQHKESRRKALVFDRLRGTVREIQEGLNSARPVFDMFHQQHGRGRETGRRSSAKSGATSGGADT----NNHDYG--TPPPLSPSALRAGLGSLGIPLGDDDFATLIATTDPDRRGEVSYPNFCAALNLHRLRSSDVYGDRRRGGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYARRRAIKLAPPADARTALEGGVFHLNPATHGWPNPNFTTTMIPVWNGHGRRTARQQQSAEGAYRSKRRQSPAD--------VHTKAKRQTIYVVGGGAPF-----DETGVEAEKLFRRGLGVKMRRSQSLSSSYSRGRGGWDNVGTPSPRCSARPSSPSATAALNDGSVWTGAGSVVLPRGGSGDRRGRFHTPRNNDLGFGSERMRSLSRCDDDEDRCSSRRDRTSSNVGDYGGRPRGSEAGGXXXXXXXXXXEVAGPRSRRARSLSLGAERRYGDWARSSVQHLLRHDNWLGVRSSRSAVAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGLFRQVWNGFDGRPGIKNNDSRHPDQTRERRGTPYAIDTDLSSDRRAMPTSSAGAGRSTRY**SCAYTR--------IKSGGENIRAGPKVR 4281
S++A C TAAGSPTRR+ PYDVGE IIHS PP PPPRA+EL+KEEVHRALKAFST+P+KGE AP+PSDLLRPFDVS DGRVTYREF+ G+LGLG+GLT EAE LA+ VD E TGLVDRG FEAAAT+DWG S GG + RPTSAP V + G A PGE + +D S +RDGEKGY G E L R E S R +SF+ WQ++ A +N A+A A T AS S G RS GN + H+ S+ N+ SQ+ + SL TLRSLL++DGVF+ AD TN S+ R SF TE GR RR+RRL E+ QH AG R GGG G +R E +R R A AARAE IL LRSRGDLVGLRRA+SKADPSASGV+S+REMERV+LRRFGTGL DDEAR LAA RK+ NGRSMVDY RLFD +E +E G +G GP+ ++ + S SR+ G R+A+ S + + AAG RTR+SQRRY RRGVP+ GG E SQLVRRAR+KTLALLDRHGT SVDC+FGLVD AHTQ+V+SG+LRE LRILGGSDTLSE EHRALF+ ISKG DR+ YR ELLDTLR +E AE+RERTQRKL HQAGLP SGRGSA HWRHSD+LDWD PPAGGG R G VGL GGRQHKESRR+ALVF RLR V++IQE NSA PVFDMF Q+ GR R G +A NN D TP PLSPSALRAGLGSLG+PLGD+DF TLIA TDPDRRG+VSYP FC AL+LH LR R GS XXXXXXXXXXXXXXXXXXXXXXXXX Y RRRA++LAPPADAR LEGGVFH+N AT G NPNFTTTM+P G G R A + +YR KRRQSPA V TK+ QT+ VVG G D+TG+EAE+ FR+GLG+KMR W+ + GG G RRGR HTPR++DLGFGSERMRS SRCDDDED C R G G R G+ GP RR RSLSLGAERRYGDWARSSVQHLLR D WLG RS R P Q N DG + NN R+ QTRERR TPYA D DLSS R MP ++A S + Y R +SGGE P +R
Sbjct: 51 SNQATCSTAAGSPTRRDVPYDVGECIIHSAPPPVPPPRALELVKEEVHRALKAFSTKPVKGEPKAPLPSDLLRPFDVSKDGRVTYREFRTGILGLGIGLTAHEAEALAQVVDREGTGLVDRGPFEAAATRDWGSSGRDGGWQGRPTSAPGSVPGAVAEPQIGGGALHSPGE-------HTSHPQVDDGSIVRDGEKGYA---GGEVLPPPPTPSEAPEPLRQWS--RLETTGRPSRNRGPSTLSFDCWQQN------ANRRNESNNAADAVVAKTPASTGSSIG-RSDGNVNGHHKHSRDTSTXXXXXXXXXXXXNSDYNTHNNNLQPSQKYLQSLQTLRSLLQRDGVFDEVKSTPIADETN--KSNERSLSFGTEIRGR-RRERRLQEQSQH--------QAGSRLSGGGG---GDGKQRVDLSRVEHRRSREEDCRADSPXXXXXXXXXXXXXXXXXXXXXXXXSTGKTNVVVSDTEAPDHLARAQAVAARAEKILQLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDDEARHLAACYRKDFNGRSMVDYGRLFDNMEVQEGGVYGRGVTPSPGPSKSS-----------------------------GRGCWEDQQHSSSRDGGGGTRARSASVSAAGEXRRRGSRPMRAAAGGRTRHSQRRYWRRGVPDAADDNFVRGGAPA--EASQLVRRARAKTLALLDRHGTRSVDCVFGLVDQAHTQTVNSGELREALRILGGSDTLSEIEHRALFKGISKGRDRIHYRDKTYPNTQRYSRGPAASVVATTCFIYTLFFGTPLVLHKQELLDTLRASEVAEHRERTQRKLQHQAGLPTSGRGSAIHWRHSDVLDWDAPPAGGGGRKGSRGVGLKGGRQHKESRRQALVFQRLRDGVKQIQEKQNSAWPVFDMFRQR-GRARAGGYCDAAAXXXXXXXXXXXXTINNDDDPDRTPSPLSPSALRAGLGSLGVPLGDEDFDTLIAATDPDRRGKVSYPTFCEALDLHPLRGDPPDAHRTASGSEEEERPSSAPPVPTKSRQHNRQXXXXXXXXXXXXXXXXXXXXXXXXXGG------------YIRRRAMELAPPADAREDLEGGVFHVNEATCGCANPNFTTTMVPASTGGGCR-ANNNRPRPDSYRPKRRQSPAPAPGGTLTGVRTKSHGQTLLVVGSGGGDRVGLRDQTGLEAERRFRQGLGIKMR-------------------------------------------AWSDDNNT----GGRGHRRGRSHTPRDSDLGFGSERMRSTSRCDDDED-CRGGGGRRERRSGSVGWRRTGTNGD-------------VGPGLRRVRSLSLGAERRYGDWARSSVQHLLRQDGWLGARSFRLDPPSPVTGSRNTAGGGHSSEQHGGRGKSRWPRAETAFEMRRSRSSPRD------LSQHKNSADG--SVMNN-RRYSAQTRERRPTPYATDADLSSVCRVMPAATAATSHSAVALTTEGYGRWRKEATGGSRSGGERGDFSPTLR 1440
BLAST of mRNA_P-littoralis_Contig8.77.1 vs. uniprot
Match: D8LB86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB86_ECTSI) HSP 1 Score: 876 bits (2263), Expect = 1.670e-292 Identity = 658/1301 (50.58%), Postives = 754/1301 (57.96%), Query Frame = 1
Query: 1 RPQTVGGALDRIPQLMHELHTKGAASKGSA--APSYRIQFL-RREPQTASDRAACPTAAGSPTRRESPYDVGEYIIHSTSPPAPPPRAIELIKEEVHRALKAFSTRPLKGETDAPVPSDLLRPFDVSLDGRVTYREFKAGVLGLGVGLTGQEAELLARAVDGEDTGLVDRGRFEAAATQDWGRSSGGCE----RPTSAPAPVVATPDASRCDGEAAPLPGE*KEKQEVESRRRAIDIISGIRDGEKGYCCADGEEQLXXXXXXXXXXXXXXXXXXXRSEPMATNSAVRSSPAVSFEHWQRHQTTTPAAGGSGSDSNGAEAAATAASIARSNGSRSI------------------------GNKSARHERSQSCKNSSGMKRPMSQQNVHSLNTLRSLLRQDGVFEADDPAVTADRTNYDSSHRRRCSFDTEKEGRDRRDRRLHERQQHY------------------------------HRPRFRQDAGHRTDE---------------------GGGRGRGXXXXXXXXARKEQGLARRRAATAARAENILWLRSRGDLVGLRRAMSKADPSASGVVSQREMERVVLRRFGTGLSDDEARELAALNRKEHNGRSMVDYNRLFDTLEAKEAGFFGGPAGAAFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLLSPSREDGKDKDKRAATTSGSTKPAAGSRTRYSQRRYSRRGVPECDAAVGGSGGEKIRVEESQLVRRARSKTLALLDRHGTLSVDCIFGLVDPAHTQSVSSGQLREGLRILGGSDTLSEAEHRALFRDISKGNDRVQYRELLDTLRLAEAAENRERTQRKLAHQAGLPASGRGSASHWRHSDILDWDVPPAGGGNRDGPSRVGLTGGRQHKESRRKALVFDRLRGTVREIQEGLNSARPVFDMFHQQHGRGRETGRRSSAKSGA--TSGGADTNNHDYG---TPPPLSPSALRAGLGSLGIPLGDDDFATLIATTDPDRRGEVSYPNFCAALNLHRLRSSDVYGDRRRGGSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYARRRAIKLAPPADARTALEGGVFHLNPATHGWPNPNFTTTMIPVWNGHGRRTARQQQSAEGAYRSKRRQSPAD--------VHTKAKRQTIYVVGGGAPF-----DETGVEAEKLFRRGLGVKMRRSQSLSSSYSRGRGGWDNVGTPSPRCSARPSSPSATAALNDGSVWTGAGSVVLPRGGSGDRRGRFHTPRNNDLGFGSERMRSLS 3603
RP+ + G LD+IP+LMH+LH GS SYR Q+L R+E Q S++ C TAAGSPT R+ PYD+GEYIIHS PP PPPRA+EL+KEEVHRALKAFST+P+KGE AP+PSDLLRPFDVS DGRVTYRE + G+LGLG+GLT +EAE LA+ VD E TGLVDRG FEAAAT+DWG GG RPTSAP V S+ + A PGE +V+ R A DGEKG CA GE RSE S +SF++WQ++ +DSN A A + A G KS S S N+ + +SQ+ + SL TLRSLL+ D VF+ AD TN +RR SF TE GR R +RR E+ QH HR RFR++ G R D G LAR R+ AARAE+IL LRSRGDLVGLRRA+SKADPSASGV+S+REMERV+LRRFGTGL D EAR LAA RK+ NGRSMVDY RLFD+LE KE FG G S XXXXXXXX R G S + AAG+RTR+SQRRY RRGVP+ AA GG EESQLVRRAR+KTLALLDRHGT SVDC+FGLVD AHTQ+VSSG+LRE LRILGGSDTLSE EHRALF+ ISKG DRV YRELLDTLR +E AE+RERTQRKL HQAGLP SGRGSA HWRHSD+LDWD PPAGGG+R G VGL GGRQHKESRR+ALVF RLR VR+IQE NSA PVFDMF ++ GRGR G +A + A T+ G T N+D TPPPLSPSALRAGLGSLG+PLG++DF TLIA TDPDRRGEV+YP FC AL+LH LR R GS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX YARRRA++LAPPAD R LEGGVFH+N AT+G NPNFTTTM+P G G + A AYR KRRQSPA + TK+ QT+ VVG G D+TG+EAE+ FR+GLGVKMR DN P+P LN GG G+RRGR HTPR++DLGFGSERMRS S
Sbjct: 41 RPE-INGTLDQIPRLMHKLHNYNNERTGSTRVTSSYRDQYLTRKEQQRISNQVTCSTAAGSPTHRDVPYDIGEYIIHSAPPPVPPPRALELVKEEVHRALKAFSTQPVKGEPKAPLPSDLLRPFDVSKDGRVTYRELRTGILGLGIGLTAREAEELAQVVDREGTGLVDRGHFEAAATRDWGSGGGGDGGWQGRPTSAPGRVXGAVAESQSESGALHSPGEHASHPQVDDGRIA-------HDGEKG--CAGGE---VLPPPPTPSEAPEPLRQWSRSETTGRPSRNHGPSTLSFDYWQQNANRR-------NDSNNAANAVVTNTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKS-----SNSDYNTHNNNQQLSQKYIQSLQTLRSLLQLDRVFDEVKSTPIADETN--KPNRRSLSFGTETRGR-RCERRRQEQSQHQSGLRPSGXXXXXXSCGVGDGKQRVDSTKVEHR-RFREEDG-RADSPXXXXXXXXXXXXXXXXXXXXXXXXXTGNTSVVVSDTEAPDHLARARSV-AARAESILRLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDHEARHLAARYRKDFNGRSMVDYGRLFDSLEVKEGDLFG--RGVTSSPGPSTSSGRGCWEAQQRSSSXXXXXXXXARSAPTSTAGEGRRRG----------SRPMRAAAGARTRHSQRRYWRRGVPDAAAADFVRGGAPA--EESQLVRRARAKTLALLDRHGTPSVDCVFGLVDQAHTQTVSSGELREALRILGGSDTLSEIEHRALFKGISKGRDRVLYRELLDTLRASEVAEHRERTQRKLQHQAGLPTSGRGSAIHWRHSDVLDWDAPPAGGGDRKGSCGVGLKGGRQHKESRRQALVFQRLRDGVRQIQEKQNSAGPVFDMFRRR-GRGRTGGYSDAAATVAAPTTSGNGTMNNDNDPVRTPPPLSPSALRAGLGSLGVPLGNEDFVTLIAATDPDRRGEVTYPTFCEALDLHPLRGDPSDAHRTASGSEEQERPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDAGKGRREGXXG---------YARRRAMELAPPADTREDLEGGVFHVNEATYGCDNPNFTTTMVPASIGGGCK-ANNNHPRPDAYRPKRRQSPAPAPGGTLTGIRTKSHGQTLLVVGSGGGDRVGLRDQTGLEAERRFRQGLGVKMRAWSG------------DNNTDPTP-------------VLN---------------GGRGNRRGRSHTPRDSDLGFGSERMRSTS 1245
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4338 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Ec32 ortholog description | EF-hand domain pair |
| Ec32 ortholog | Ec-27_004810.1 |
| Cds size | 3396 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791634.6696951-UTR-P-littoralis_Contig8:345416..345539 | 1680791634.6696951-UTR-P-littoralis_Contig8:345416..345539 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 345417..345539 - |
| 1680791634.774059-UTR-P-littoralis_Contig8:350673..350849 | 1680791634.774059-UTR-P-littoralis_Contig8:350673..350849 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 350674..350849 - |
| 1680791634.78613-UTR-P-littoralis_Contig8:350885..351393 | 1680791634.78613-UTR-P-littoralis_Contig8:350885..351393 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 350886..351393 - |
| 1680791634.7971468-UTR-P-littoralis_Contig8:352127..352262 | 1680791634.7971468-UTR-P-littoralis_Contig8:352127..352262 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig8 352128..352262 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791634.6844072-CDS-P-littoralis_Contig8:345539..345767 | 1680791634.6844072-CDS-P-littoralis_Contig8:345539..345767 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 345540..345767 - |
| 1680791634.702303-CDS-P-littoralis_Contig8:345815..346452 | 1680791634.702303-CDS-P-littoralis_Contig8:345815..346452 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 345816..346452 - |
| 1680791634.7190542-CDS-P-littoralis_Contig8:346842..347684 | 1680791634.7190542-CDS-P-littoralis_Contig8:346842..347684 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 346843..347684 - |
| 1680791634.731613-CDS-P-littoralis_Contig8:348137..348437 | 1680791634.731613-CDS-P-littoralis_Contig8:348137..348437 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 348138..348437 - |
| 1680791634.7466605-CDS-P-littoralis_Contig8:348795..348932 | 1680791634.7466605-CDS-P-littoralis_Contig8:348795..348932 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 348796..348932 - |
| 1680791634.7614257-CDS-P-littoralis_Contig8:349421..350673 | 1680791634.7614257-CDS-P-littoralis_Contig8:349421..350673 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig8 349422..350673 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig8.77.1 >prot_P-littoralis_Contig8.77.1 ID=prot_P-littoralis_Contig8.77.1|Name=mRNA_P-littoralis_Contig8.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1132bp
MATNSAVRSSPAVSFEHWQRHQTTTPAAGGSGSDSNGAEAAATAASIARS
NGSRSIGNKSARHERSQSCKNSSGMKRPMSQQNVHSLNTLRSLLRQDGVF
EADDPAVTADRTNYDSSHRRRCSFDTEKEGRDRRDRRLHERQQHYHRPRF
RQDAGHRTDEGGGRGRGGGNVSSSSARKEQGLARRRAATAARAENILWLR
SRGDLVGLRRAMSKADPSASGVVSQREMERVVLRRFGTGLSDDEARELAA
LNRKEHNGRSMVDYNRLFDTLEAKEAGFFGGPAGAAFSSSSSSSSLSYAH
HRGRGRTRRGEKQRQQQQQQQQRLLSPSREDGKDKDKRAATTSGSTKPAA
GSRTRYSQRRYSRRGVPECDAAVGGSGGEKIRVEESQLVRRARSKTLALL
DRHGTLSVDCIFGLVDPAHTQSVSSGQLREGLRILGGSDTLSEAEHRALF
RDISKGNDRVQYRELLDTLRLAEAAENRERTQRKLAHQAGLPASGRGSAS
HWRHSDILDWDVPPAGGGNRDGPSRVGLTGGRQHKESRRKALVFDRLRGT
VREIQEGLNSARPVFDMFHQQHGRGRETGRRSSAKSGATSGGADTNNHDY
GTPPPLSPSALRAGLGSLGIPLGDDDFATLIATTDPDRRGEVSYPNFCAA
LNLHRLRSSDVYGDRRRGGSRSHGGSGKGGGADFPPQRSSSAPPRQRSSQ
TTRQGTAVGGGGGGGGGGGGGDSERGGEGGGYARRRAIKLAPPADARTAL
EGGVFHLNPATHGWPNPNFTTTMIPVWNGHGRRTARQQQSAEGAYRSKRR
QSPADVHTKAKRQTIYVVGGGAPFDETGVEAEKLFRRGLGVKMRRSQSLS
SSYSRGRGGWDNVGTPSPRCSARPSSPSATAALNDGSVWTGAGSVVLPRG
GSGDRRGRFHTPRNNDLGFGSERMRSLSRCDDDEDRCSSRRDRTSSNVGD
YGGRPRGSEAGGGSGSGSGGGGEVAGPRSRRARSLSLGAERRYGDWARSS
VQHLLRHDNWLGVRSSRSAVAGPPSSTTGGYSSSDHGGGGGESQKQQQRQ
RQHQRRKMRRPRSSSRGGGDGLFRQVWNGFDGRPGIKNNDSRHPDQTRER
RGTPYAIDTDLSSDRRAMPTSSAGAGRSTRY* back to topmRNA from alignment at P-littoralis_Contig8:345417..352262- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig8.77.1 ID=mRNA_P-littoralis_Contig8.77.1|Name=mRNA_P-littoralis_Contig8.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6846bp|location=Sequence derived from alignment at P-littoralis_Contig8:345417..352262- (Pylaiella littoralis U1_48)
CGTCCACAGACCGTTGGGGGGGCGCTTGACCGGATCCCGCAGTTGATGCA
CGAGCTCCACACTAAGGGAGCCGCGTCGAAAGGCAGTGCTGCACCGAGCT
ACCGCATTCAGTTCCTCAGAAGAGAGCCCCAGACGGTGGGTCCACTCACA
CATGTGGGTACTGCCTAGTGCAGTGAAAGACGGAAGGACCTCTGTAGTAT
ATATCACCTCCATTCTGGGTCTTTTAACCACTTCCCTTTCGGCTGACACC
GGGGGAGTGTTCGCACAGCAGTACTGCACCGTGTTTTTGTATACGGCAAG
CATCATGAATACTCTTACAGCTGCACCCAGCTCGGTCTGTCCATAAAAGA
AGCCCGTTGTCATCTTGCGGCAAACCCGCAGCGAACTCGTCGAAGAGTCA
ATGTTGCTGTGCATTACAGTGTCATCGCTGAATCACAAAGATGGCTGGCG
TAGAAAAGAACAAGCTCTTCTGGATAACGTACGTTTGCCATTTGAAGTCT
ATGAGAGCGACCAGCGCTGGGCGTACTGAGTTCTTCCTTGCATGCAAGTA
GGGGTAAGATGCGCGACTGTACGCAACAGGTGCCGGGCCACCGGCCACAA
CCCCGCAGTAATGTTTGTATGATCAAGCTGCAGAAAATTCGCCTTTTCAG
CAACAAAACAAAAATAGATCATCCTTCATTGTTGTGTGTCGTTGTGCTTA
CTGTACGTATTTGGTGGCATACCGAAAGTTCAAAACATTTCATACCGATC
GCGCATGAACCAAGTCGGAATGCGAACACGTACGCGAAATATTAATCAAC
ACCGTCAGCGGTGGATACCGAATCCCTATTTCTTTTCGCCTGTTGCTGCT
TTTCTTATTGCGAAAAAAGGCCTCCGACCGAGCTGCGTGTCCCACGGCGG
CAGGGTCGCCGACCCGCCGAGAGTCTCCGTACGACGTAGGCGAGTACATC
ATCCACTCAACGTCGCCGCCCGCTCCTCCTCCGCGCGCCATCGAGCTGAT
CAAGGAGGAAGTCCACCGCGCTCTCAAAGCGTTTTCGACCCGGCCGCTTA
AAGGGGAAACTGACGCCCCCGTACCGTCCGACCTGCTTCGACCTTTCGAC
GTGTCTTTGGATGGCCGGGTGACCTACCGTGAGTTTAAAGCCGGGGTTCT
GGGGCTGGGAGTCGGGCTGACGGGTCAAGAGGCAGAGCTGCTGGCGCGAG
CCGTCGACGGGGAGGATACCGGGCTCGTCGACAGGGGGCGCTTCGAAGCC
GCGGCAACTCAAGATTGGGGGCGCAGCAGCGGCGGGTGCGAGAGGCCGAC
GTCGGCACCGGCACCAGTGGTGGCGACCCCTGACGCCTCGCGTTGCGATG
GAGAGGCTGCACCGCTACCTGGTGAGTGTGGTAACAATCAGGGTGCATTT
TGTCGCCCAGCAGAGAAGGAGAAACAGGAGGTGGAATCTCGGCGTCGGGC
AATCGACATCATCAGCGGAATTCGCGATGGCGAGAAGGGTTACTGCTGTG
CAGACGGCGAAGAACAGCTCCCGCCACCGGCACCACCACCACCACCACCC
CGGAGGTCGAACCAAGTACCACCTCCGAGATCAGAGCCGATGGCGACGAA
TTCAGCTGTACGCAGTTCCCCTGCGGTGTCCTTCGAGCACTGGCAACGGC
ACCAAACGACGACGCCTGCAGCAGGGGGCAGCGGCAGCGACAGCAACGGA
GCAGAAGCTGCTGCCACGGCCGCTTCGATCGCCAGAAGCAACGGCAGCAG
AAGCATCGGCAACAAGAGCGCTCGCCACGAAAGGTCTCAAAGTTGCAAGA
ATAGCAGCGGCATGAAGCGCCCGATGTCCCAACAAAACGTTCACTCCCTC
AACACACTGCGCTCCCTTCTGCGGCAAGACGGGGTCTTCGAAGCCGACGA
CCCCGCGGTCACGGCAGACCGGACGAACTACGACAGCAGTCACCGTCGCC
GATGCTCCTTCGATACCGAGAAAGAAGGCAGAGATCGCCGTGATCGACGT
CTTCACGAGCGACAACAGCACTACCACCGTCCCCGCTTTCGACAAGACGC
GGGGCATCGAACCGACGAGGGCGGGGGCCGGGGCAGAGGCGGCGGCAATG
TATCCTCCTCGTCCGCAAGAAAAGAGCAGGGCCTCGCAAGAAGGCGGGCG
GCAACCGCGGCTCGGGCAGAGAACATTCTCTGGCTGCGGTCCCGGGGCGA
CCTTGTGGGGCTTCGGAGGGCAATGTCGAAGGCGGACCCTTCGGCGTCGG
GCGTGGTGTCGCAGAGGGAGATGGAGCGGGTAGTTTTGCGTCGGTTCGGC
ACCGGCCTGTCCGACGACGAGGCCAGGGAGCTCGCCGCGCTGAACCGAAA
GGAGCACAACGGCCGCTCGATGGTGGACTACAACCGCCTGTTCGATACCC
TGGAGGCGAAAGAGGCCGGTTTCTTCGGGGGGCCGGCAGGAGCGGCGTTC
TCGTCATCATCGTCGTCATCGTCGCTATCCTACGCTCACCACCGTGGACG
TGGACGGACACGAAGAGGAGAGAAACAACGGCAACAGCAGCAGCAGCAGC
AGCAACGGTTGTTGTCGCCCTCGAGAGAGGACGGCAAGGATAAGGATAAG
CGGGCGGCTACGACGTCGGGGTCGACCAAGCCCGCGGCGGGGAGTAGGAC
CCGGTACAGTCAACGGAGGTATAGCAGGAGAGGGGTACCCGAGTGTGATG
CTGCTGTCGGAGGGTCGGGTGGGGAGAAAATTCGGGTGGAAGAGAGCCAG
TTGGTGAGGAGGGCCCGATCCAAGACACTCGCGTTGCTGGACCGACACGG
AACCCTGAGCGTTGACTGTATATTCGGTCTCGTCGACCCAGGTGTGTGTG
CGCATTGCCATCCTATTAGCCACGGGTTTTTCAACAAGTGGTATCGGAGT
TTATCTGGAATAGGGTACCAACGTATTCATAATAATGTCGGGACATGTCT
GCAGGACTGTGCCGTTTACGTTGCGGCTAAGACAGGCCCTTTTCGGTCGT
GTTGCACGGAGACTGCTGTGAACTTTCATTCACGATGGCTAGACGTCGCC
TGCGTGGCACCAGGAGTGTGCAGCATGTGTCCACTGCGGTATGCTGGGTT
CATTCGGCCCCAAAATGACAGAGCGATGTATATTGCGCGTTTCGAACGAT
AGTGCCGTCTCGCAGAGCCACGTCGCATCTTTTCTTCTAGGTTCCCCAGC
GTTTTTTTTCGTGGTGCTCGTCGACCGATCTCACCACGACCAGGGGTCGG
ATCCACGTGCGTTGCTTTTATCTCAGCTTTTTTTGTATATCGCGCTGAGG
AAACCCCCCACTCTGGCCTCGTTCCATCAGCGCACACCCAGAGCGTAAGC
TCCGGGCAACTCCGCGAAGGCCTCCGCATCCTCGGCGGATCGGACACGCT
GTCCGAAGCCGAGCACAGGGCCCTGTTCAGGGACATCAGTAAAGGCAATG
ATCGCGTTCAGTATAGGGTGAGTTGAAACACAAAACACGCGCGCACACAC
ATACACAGGAAGAGCGAACAAACTCTATGCACCTTATGATGAAAACAGAC
ACAAGTAGCGGGGGCACATGGTTTCGCCTTGATGTTGCAAGCCTCCGGGG
GCACCCCCATCCGCACATAACTCGACAGGCCGTCTACTCGTGGGTACGTA
CTACCCCACGTAAATATGCACACCTTCCAATCTAATGATCTCCATCGCTC
ACTTGGATGATATGGAAGGTGAATGACGATTCACCGCGTAATGTATTTTT
GTCGTTACAAAGCGGTTTACACAATGCGTGCTGCTCTCGTTCGCTGTATG
TGTCCGTGACAACAACAAAAAAAAGGAATTGCTTGACACTCTCCGATTGG
CTGAGGCAGCCGAGAACAGGGAACGCACGCAGCGAAAGCTCGCGCACCAG
GCGGGTTTGCCGGCGAGCGGCCGAGGCTCGGCAAGTCACTGGCGCCACAG
CGATATTCTCGACTGGGACGTGCCGCCGGCTGGGGGTGGCAACAGGGACG
GCCCCTCCCGTGTCGGTCTCACTGGGGGTCGTCAGCACAAAGAGTCGCGG
AGGAAGGCGCTGGTGTTTGATAGGTTGCGGGGCACCGTGAGAGAGATCCA
GGAAGGGCTCAACAGCGCTAGACCGGTAAAATACAACACCAACCGCAGTA
GACCAGATGTATGTTTGTATTGTATGTATGCATTGCTCGTCCTTGGTTGC
GAAAGCGCTTTTTTTGCTTTGATCTCTGTTTTTGCCTTGCTTTGGTTTGT
TTTGTTTTGTTTCGTGTTGCTTTGTTTTGCCCCGCCGTTAACAACGTGGA
TTGTTGTCTTGAGAGGGAGAGGGAGGGAGGGAGGGGCGGGGGGGGGGGGG
TCTAGTAGGGCCACAGGGTTTTTGGAAGTAATTTCCGAGTGGGGCTTGAC
TTGAAGATCTTGACTTGAACATGGGCTTGAAGATGGAAACGAGGCAGTGA
GAAGCAAAAACATTTAATGCAGCAGATCAGCGTTTTCAGCAATTCTTTGC
CTGACATCATACGGTGAAAATTGCACAATAACAAGTCAGCAGGCCTGCGC
ACACCCAACCGTTGTCGGCCCGCTGCAGGTATTCGACATGTTCCACCAAC
AACATGGACGGGGACGAGAAACAGGAAGAAGGAGCAGTGCGAAAAGCGGC
GCAACGTCGGGGGGCGCCGACACGAACAACCACGACTACGGCACCCCGCC
GCCTCTTTCACCGTCGGCACTCCGAGCCGGCCTCGGGTCCCTCGGCATTC
CGCTCGGAGACGACGACTTCGCCACCCTCATCGCCACCACGGACCCCGAC
CGCCGCGGAGAGGTGTCATACCCCAACTTTTGCGCGGCCCTCAACCTACA
CCGACTCCGCAGCAGCGACGTTTACGGCGATCGTCGGCGCGGCGGCAGCC
GCAGCCACGGAGGCAGTGGCAAGGGTGGTGGCGCAGATTTCCCCCCACAG
CGGTCCTCCTCCGCGCCGCCCAGACAGAGGTCGAGCCAAACCACCAGACA
AGGCACAGCCGTGGGCGGCGGTGGTGGTGGCGGCGGCGGCGGCGGCGGCG
GCGACAGCGAAAGGGGAGGAGAAGGTGGAGGGTATGCTCGTCGTCGGGCG
ATCAAACTAGCTCCGCCCGCGGATGCGCGAACAGCTCTCGAGGGCGGCGT
TTTTCACCTCAACCCGGCGACTCACGGCTGGCCCAACCCCAACTTCACCA
CCACAATGATTCCGGTTTGGAACGGTCACGGGCGGCGGACGGCACGGCAG
CAGCAATCGGCGGAAGGAGCGTATCGTTCCAAGAGGCGGCAGTCTCCCGC
CGACGTCCACACGAAAGCTAAAAGACAGACCATTTACGTTGTCGGCGGGG
GTGCGCCTTTCGATGAAACCGGTGTGGAGGCGGAGAAGCTCTTCCGCCGA
GGCCTTGGAGTAAAGATGAGGTATCCTACGGTGCATGCTGGGGTTGATCA
AAGTCTGGATGAACCAGCCGATTGAAATCATCCTTGGCGGTTATGAGGTT
CTCCGGTCAATATTGGTGTAAGGCCAAGGAAACACATGGCCCCTACTCCG
CTATCCACCCCTCCGCATTCTAATCCTGCCGAGAATAAGACACGCAGTTT
ATTTCCCTTCTTCCTCGCCTGTGAAAATCGTGTGCGCTCAATGTCCAGTT
TACTTTCTGGGGTGCAACTGAGTCTGTATCGTTCATTCTGTTATTTGATT
CCACGGACTCCAGCCTGCCACTGTCGTATACGGCCAACCAACCAACACAA
CGTCGCTTGACTCGCTTCTCTGCGCCCCTTTCCGCCGGCCACACCACACC
ACGCCACCAGACGATCTCAATCTCTATCCTCAAGCTACTCGCGCGGGAGA
GGAGGATGGGACAATGTCGGCACTCCTTCTCCTCGCTGTAGCGCACGCCC
TTCTTCTCCTTCCGCCACCGCCGCTCTTAACGACGGCTCCGTATGGACCG
GCGCTGGTTCGGTCGTCCTTCCTCGCGGCGGCAGCGGCGACCGGCGTGGC
CGCTTCCACACCCCGAGGAACAACGATCTCGGGTTCGGTTCCGAGCGCAT
GCGCTCCCTGTCTAGGTGCGATGACGACGAAGACCGCTGCAGCAGCAGGC
GCGATAGAACAAGCAGCAACGTCGGCGATTACGGCGGGCGACCCCGGGGG
AGCGAGGCCGGCGGCGGCAGCGGCAGCGGCAGCGGCGGTGGGGGGGAGGT
AGCGGGTCCGCGTTCTAGGCGGGCGCGGTCTCTCAGTCTGGGAGCCGAAC
GGCGTTACGGCGACTGGGCGCGTTCGTCAGTCCAGCACCTCTTGCGCCAC
GACAACTGGCTCGGGGTTCGCTCCTCTCGATCAGCAGTCGCGGGGCCGCC
TTCGAGCACGACCGGGGGGTATTCATCGTCAGATCACGGAGGGGGGGGGG
GAGAGAGCCAGAAGCAGCAGCAGCGGCAGCGGCAGCACCAGCGTCGAGTA
GTAGGAGTAGTAGCAGCAACAGCTGCCGAAGAGAAGCAACAGCAGAAGAT
GCGCCGACCTCGATCATCTTCAAGAGGAGGAGGAGATGGACTTTTCCGTC
AAGTTTGGAATGGCTTCGATGGTCGTCCCGGCATTAAGAACAACGATTCG
CGGCATCCGGACCAGACGAGGGAGCGCCGGGGCACCCCGTACGCCATCGA
CACCGACCTTTCGTCCGACCGTCGAGCGATGCCGACCTCATCGGCCGGCG
CTGGTCGCAGCACCCGGTATTGATGATCTTGTGCGTACACACGCATCAAA
AGCGGTGGGGAGAACATTCGGGCGGGCCCAAAGGTCCGAGCCCCTTACAG
TAGCAGCGGTTGGGTAAGCACGGCACCCAGGGCTGCGGCGGCGCCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig8:345417..352262- >mRNA_P-littoralis_Contig8.77.1 ID=mRNA_P-littoralis_Contig8.77.1|Name=mRNA_P-littoralis_Contig8.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3396bp|location=Sequence derived from alignment at P-littoralis_Contig8:345417..352262- (Pylaiella littoralis U1_48)
ATGGCGACGAATTCAGCTGTACGCAGTTCCCCTGCGGTGTCCTTCGAGCA
CTGGCAACGGCACCAAACGACGACGCCTGCAGCAGGGGGCAGCGGCAGCG
ACAGCAACGGAGCAGAAGCTGCTGCCACGGCCGCTTCGATCGCCAGAAGC
AACGGCAGCAGAAGCATCGGCAACAAGAGCGCTCGCCACGAAAGGTCTCA
AAGTTGCAAGAATAGCAGCGGCATGAAGCGCCCGATGTCCCAACAAAACG
TTCACTCCCTCAACACACTGCGCTCCCTTCTGCGGCAAGACGGGGTCTTC
GAAGCCGACGACCCCGCGGTCACGGCAGACCGGACGAACTACGACAGCAG
TCACCGTCGCCGATGCTCCTTCGATACCGAGAAAGAAGGCAGAGATCGCC
GTGATCGACGTCTTCACGAGCGACAACAGCACTACCACCGTCCCCGCTTT
CGACAAGACGCGGGGCATCGAACCGACGAGGGCGGGGGCCGGGGCAGAGG
CGGCGGCAATGTATCCTCCTCGTCCGCAAGAAAAGAGCAGGGCCTCGCAA
GAAGGCGGGCGGCAACCGCGGCTCGGGCAGAGAACATTCTCTGGCTGCGG
TCCCGGGGCGACCTTGTGGGGCTTCGGAGGGCAATGTCGAAGGCGGACCC
TTCGGCGTCGGGCGTGGTGTCGCAGAGGGAGATGGAGCGGGTAGTTTTGC
GTCGGTTCGGCACCGGCCTGTCCGACGACGAGGCCAGGGAGCTCGCCGCG
CTGAACCGAAAGGAGCACAACGGCCGCTCGATGGTGGACTACAACCGCCT
GTTCGATACCCTGGAGGCGAAAGAGGCCGGTTTCTTCGGGGGGCCGGCAG
GAGCGGCGTTCTCGTCATCATCGTCGTCATCGTCGCTATCCTACGCTCAC
CACCGTGGACGTGGACGGACACGAAGAGGAGAGAAACAACGGCAACAGCA
GCAGCAGCAGCAGCAACGGTTGTTGTCGCCCTCGAGAGAGGACGGCAAGG
ATAAGGATAAGCGGGCGGCTACGACGTCGGGGTCGACCAAGCCCGCGGCG
GGGAGTAGGACCCGGTACAGTCAACGGAGGTATAGCAGGAGAGGGGTACC
CGAGTGTGATGCTGCTGTCGGAGGGTCGGGTGGGGAGAAAATTCGGGTGG
AAGAGAGCCAGTTGGTGAGGAGGGCCCGATCCAAGACACTCGCGTTGCTG
GACCGACACGGAACCCTGAGCGTTGACTGTATATTCGGTCTCGTCGACCC
AGCGCACACCCAGAGCGTAAGCTCCGGGCAACTCCGCGAAGGCCTCCGCA
TCCTCGGCGGATCGGACACGCTGTCCGAAGCCGAGCACAGGGCCCTGTTC
AGGGACATCAGTAAAGGCAATGATCGCGTTCAGTATAGGGAATTGCTTGA
CACTCTCCGATTGGCTGAGGCAGCCGAGAACAGGGAACGCACGCAGCGAA
AGCTCGCGCACCAGGCGGGTTTGCCGGCGAGCGGCCGAGGCTCGGCAAGT
CACTGGCGCCACAGCGATATTCTCGACTGGGACGTGCCGCCGGCTGGGGG
TGGCAACAGGGACGGCCCCTCCCGTGTCGGTCTCACTGGGGGTCGTCAGC
ACAAAGAGTCGCGGAGGAAGGCGCTGGTGTTTGATAGGTTGCGGGGCACC
GTGAGAGAGATCCAGGAAGGGCTCAACAGCGCTAGACCGGTATTCGACAT
GTTCCACCAACAACATGGACGGGGACGAGAAACAGGAAGAAGGAGCAGTG
CGAAAAGCGGCGCAACGTCGGGGGGCGCCGACACGAACAACCACGACTAC
GGCACCCCGCCGCCTCTTTCACCGTCGGCACTCCGAGCCGGCCTCGGGTC
CCTCGGCATTCCGCTCGGAGACGACGACTTCGCCACCCTCATCGCCACCA
CGGACCCCGACCGCCGCGGAGAGGTGTCATACCCCAACTTTTGCGCGGCC
CTCAACCTACACCGACTCCGCAGCAGCGACGTTTACGGCGATCGTCGGCG
CGGCGGCAGCCGCAGCCACGGAGGCAGTGGCAAGGGTGGTGGCGCAGATT
TCCCCCCACAGCGGTCCTCCTCCGCGCCGCCCAGACAGAGGTCGAGCCAA
ACCACCAGACAAGGCACAGCCGTGGGCGGCGGTGGTGGTGGCGGCGGCGG
CGGCGGCGGCGGCGACAGCGAAAGGGGAGGAGAAGGTGGAGGGTATGCTC
GTCGTCGGGCGATCAAACTAGCTCCGCCCGCGGATGCGCGAACAGCTCTC
GAGGGCGGCGTTTTTCACCTCAACCCGGCGACTCACGGCTGGCCCAACCC
CAACTTCACCACCACAATGATTCCGGTTTGGAACGGTCACGGGCGGCGGA
CGGCACGGCAGCAGCAATCGGCGGAAGGAGCGTATCGTTCCAAGAGGCGG
CAGTCTCCCGCCGACGTCCACACGAAAGCTAAAAGACAGACCATTTACGT
TGTCGGCGGGGGTGCGCCTTTCGATGAAACCGGTGTGGAGGCGGAGAAGC
TCTTCCGCCGAGGCCTTGGAGTAAAGATGAGACGATCTCAATCTCTATCC
TCAAGCTACTCGCGCGGGAGAGGAGGATGGGACAATGTCGGCACTCCTTC
TCCTCGCTGTAGCGCACGCCCTTCTTCTCCTTCCGCCACCGCCGCTCTTA
ACGACGGCTCCGTATGGACCGGCGCTGGTTCGGTCGTCCTTCCTCGCGGC
GGCAGCGGCGACCGGCGTGGCCGCTTCCACACCCCGAGGAACAACGATCT
CGGGTTCGGTTCCGAGCGCATGCGCTCCCTGTCTAGGTGCGATGACGACG
AAGACCGCTGCAGCAGCAGGCGCGATAGAACAAGCAGCAACGTCGGCGAT
TACGGCGGGCGACCCCGGGGGAGCGAGGCCGGCGGCGGCAGCGGCAGCGG
CAGCGGCGGTGGGGGGGAGGTAGCGGGTCCGCGTTCTAGGCGGGCGCGGT
CTCTCAGTCTGGGAGCCGAACGGCGTTACGGCGACTGGGCGCGTTCGTCA
GTCCAGCACCTCTTGCGCCACGACAACTGGCTCGGGGTTCGCTCCTCTCG
ATCAGCAGTCGCGGGGCCGCCTTCGAGCACGACCGGGGGGTATTCATCGT
CAGATCACGGAGGGGGGGGGGGAGAGAGCCAGAAGCAGCAGCAGCGGCAG
CGGCAGCACCAGCGTCGAAAGATGCGCCGACCTCGATCATCTTCAAGAGG
AGGAGGAGATGGACTTTTCCGTCAAGTTTGGAATGGCTTCGATGGTCGTC
CCGGCATTAAGAACAACGATTCGCGGCATCCGGACCAGACGAGGGAGCGC
CGGGGCACCCCGTACGCCATCGACACCGACCTTTCGTCCGACCGTCGAGC
GATGCCGACCTCATCGGCCGGCGCTGGTCGCAGCACCCGGTATTGA back to top
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