mRNA_P-littoralis_Contig8.69.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig8.69.1
Unique NamemRNA_P-littoralis_Contig8.69.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 6.980e-64
Identity = 145/375 (38.67%), Postives = 196/375 (52.27%), Query Frame = 1
Query:   25 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREE-----VPKEAN 954
            KL+V+ F+R+ C DG P G  GA KV  + ++ I +W   E  L A  S     SK + +H   +A   ++E A+V+ IN  RK+         M KLL   P   GG+ ++ +PE+      +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I TGG+ EK R+T+ LAV  DG+KV  RII+KG PF                           R+  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++     + +EAN
Sbjct:   61 KLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREAN 433          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 5.070e-63
Identity = 144/367 (39.24%), Postives = 192/367 (52.32%), Query Frame = 1
Query:    7 AYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCH 927
            +Y    KL+ + F+R+ C DG PVG  GA KV  +D++ I  W  +EA +    K K   SK +S+H G    T EVE  + D IN  R+         VM KLL   P   GG+ +    E+   F+ +F  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T+ LAV  DG KV  RII+KG PF                           +T+FGYP  G+S GVQ+ SW D  +   W+++ +  RP  GS  + QR S+LVLDDFR +
Sbjct:   74 SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN 438          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 4.470e-61
Identity = 135/351 (38.46%), Postives = 184/351 (52.42%), Query Frame = 1
Query:   64 DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAA-VTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREE 936
            DG PVG  GA KV  + +K I +W   EA+L    S     SK + +H+G +  T + E      ++      A  +    VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL  +L + A E                               +F  + NMDQ P+Q EMP +TT++KTG K A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF                           R   G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH +E
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDE 463          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.520e-59
Identity = 144/377 (38.20%), Postives = 190/377 (50.40%), Query Frame = 1
Query:   25 KLEVLKFSRLTCG-DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------RTSFGYPA-----------GGISLGVQ--------------KSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREE 936
            KL    ++R  C  DG PVG  GA  V  +  K I +W  QE +L    S     SK + +H+G +A T + E A+VD +N  RK         VM KLL   P   GGM +  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGGE EK R+T+VLAV  DG+KV PRII+KG PF               + S  +             GG    V               + SW D  + + W+   +  RP + S   QRP +LVLDDF+CH++E
Sbjct:   88 KLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDE 463          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 8.410e-58
Identity = 137/355 (38.59%), Postives = 185/355 (52.11%), Query Frame = 1
Query:   76 VGRRGAGKV-FGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREE 936
            VG +G+  +   + +K I +W  QE +L    S     SK + +H+G +A T + E A+VD IN  RK         VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV  DG+ V P II+KG PF                           R   G+PA G+S GVQ+ SW    + + W+   +        M RP + S   QRP +LVLDDF+CH++E
Sbjct:   77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDE 430          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 4.560e-56
Identity = 139/364 (38.19%), Postives = 181/364 (49.73%), Query Frame = 1
Query:   25 KLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREE 936
            KL   +F+R+ C DG PVG  GA KV G+D++ +  W  +EA +    K K   SK +S+H G    T EVE  + D IN       A +   ++A                        F+ +F  WY+ F +RH FSIRR+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T  LAV  DG KV  RII+KG PF                           RT FGYP  G+   VQ+ SWCD  +   W+++ +  RP  GS  + QR S+LVLDDFRCHR E
Sbjct:    4 KLTAAEFTRVLCEDGQPVGNSGAAKVLGVDRRRVITWIGEEATMKKLVKEKPKLSKAKSIHVGMAPTTAEVEQDLEDCIN----EQLAASAGEILA------------------------FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSE 337          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 6.290e-54
Identity = 115/269 (42.75%), Postives = 151/269 (56.13%), Query Frame = 1
Query:  304 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREE 936
            M KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E                               +F  L NMDQTP+Q E+P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF                           R   G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDE 268          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.350e-52
Identity = 134/366 (36.61%), Postives = 179/366 (48.91%), Query Frame = 1
Query:  124 IRDWESQEAELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREE-----VPKEAN 954
            +RD ES  A + A  K    SK + +H G +A T ++E A+V+ IN  RK+        VM KLL   P   GG+ ++ +PE+   F+ +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I TG                            EK R+T+ LAV  DG KV  RII+KG PF                           R+  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++     + +EAN
Sbjct:   31 VRDEESLRANVSANPK---LSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREAN 392          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 6.750e-52
Identity = 112/269 (41.64%), Postives = 147/269 (54.65%), Query Frame = 1
Query:  304 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREE 936
            M KLL   P   GGM +  +P +   F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L   A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF                           R    +PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDE 268          
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Match: A0A6H5L819_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L819_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 7.930e-49
Identity = 118/320 (36.88%), Postives = 162/320 (50.62%), Query Frame = 1
Query:   73 PVGRRGAGKV----FGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPF---------------------------RTSFGYPAGGISLGVQKSSWCDGTQSDEWVT 846
            P+ R G+G+       + +K I +W  QE +L    S     SK + +H+G +A   + E A+VD IN   K         VM KLL   P   GG+P+  +PE+   F+ +FN+WY RF KR+ F IRR+TSVGQK P+G+EG AWA + KLR +L + A E                               +F  +  M QTP+Q E+P   T+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PR I+KG PF                           R   GYPA G+S GVQ+ SW D  + + W++
Sbjct:   70 PIERSGSGRERELPHPVPRKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASIVDAEQALVDYINERHKQHRGCGNREVMNKLLELKPDALGGVPANAKPEEALAFKVKFNSWYQRFRKRNGFRIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAHDESPIKGEDLTSEQLASVEAEVFEEVGIMGQTPVQHEVPVAITLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRNIFKGTPFFPPTMSGKGKSTLPRKNSVAWEIHPANRAKHGYPANGMSFGVQEKSWSDQRECNGWIS 388          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8Y4_9PHAE6.980e-6438.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM5_9PHAE5.070e-6339.24DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE4.470e-6138.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE2.520e-5938.20DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE8.410e-5838.59DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE4.560e-5638.19Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K6L9_9PHAE6.290e-5442.75DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE1.350e-5236.61DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE6.750e-5241.64DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L819_9PHAE7.930e-4936.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:338576..340323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1045
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.99e-31
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size1044
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791634.511645-CDS-P-littoralis_Contig8:338575..3391241680791634.511645-CDS-P-littoralis_Contig8:338575..339124Pylaiella littoralis U1_48CDSP-littoralis_Contig8 338576..339124 +
1680791634.526528-CDS-P-littoralis_Contig8:339229..3393461680791634.526528-CDS-P-littoralis_Contig8:339229..339346Pylaiella littoralis U1_48CDSP-littoralis_Contig8 339230..339346 +
1680791634.5435197-CDS-P-littoralis_Contig8:339866..3399531680791634.5435197-CDS-P-littoralis_Contig8:339866..339953Pylaiella littoralis U1_48CDSP-littoralis_Contig8 339867..339953 +
1680791634.5533378-CDS-P-littoralis_Contig8:340031..3403221680791634.5533378-CDS-P-littoralis_Contig8:340031..340322Pylaiella littoralis U1_48CDSP-littoralis_Contig8 340032..340322 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.69.1prot_P-littoralis_Contig8.69.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig8 338576..340322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig8.69.1

>prot_P-littoralis_Contig8.69.1 ID=prot_P-littoralis_Contig8.69.1|Name=mRNA_P-littoralis_Contig8.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=348bp
RCAYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEA
ELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDL
VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRK
TSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAIFALLYNMDQTPIQAEM
PPDTTVEKTGTKGACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNP
FRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSRDQRPSV
LVLDDFRCHREEVPKEANGPGQDAGGDAWWRADPGVPAARPDHQQGVQ
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mRNA from alignment at P-littoralis_Contig8:338576..340323+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig8.69.1 ID=mRNA_P-littoralis_Contig8.69.1|Name=mRNA_P-littoralis_Contig8.69.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1748bp|location=Sequence derived from alignment at P-littoralis_Contig8:338576..340323+ (Pylaiella littoralis U1_48)
CGGTGCGCATACGAGAACGCGCAGAAGCTCGAGGTGCTGAAGTTCAGCCG GCTAACGTGTGGTGATGGGCACCCAGTCGGAAGGCGTGGTGCGGGGAAGG TGTTCGGCATCGACAAGAAGCTGATCCGGGACTGGGAGAGCCAGGAGGCA GAGCTTGTGGCGTTTTCGAAGAAGGAGAACGCAAGCAAGCAGCGGTCGTT GCACACTGGACGCGAGGCTGACACGAAGGAGGTGGAGGTGGCCATAGTGG ACGAGATCAACACGCTCAGGAAAAACGGTGCTGCTGTGACCCGGGACCTC GTCATGGCCAAGCTTCTCTCCGAGATGCCAACCTTTTCAGGGGGCATGCC GTCCCAAGACGAGCCGGAGAAGATGGAAAAGTTTCAGAAGCGTTTCAACG CCTGGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATCCGACGCAAG ACGAGCGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAAGGCGTGGGC ATTCATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGCAGGAAGCCG TTCTCTTGGAGAGGGCAGCCCAGGCAGCGAAGGACGGAGGGACCGTTGAG ATCGAGATGGACGTCATCGCAACTGCGGAGGAACTTCTGGCTGTTCAGGG CAAGATCTTCGCCCTTCTGTACAACATGGACCAGACCCCGATCCAGGCTG AGATGCCGCCGGACACCACGGTGGAGAAGACTGGTACGAAGGGCGCTTGC ATCACGACAGGAGGTGAGACGGTGTACTAAAGGTATTTCGATTGTTGAAA TTCAGTTCAAACCAACATGGTGGAGATTTTCTGACGATGGAACAAGCGGG GAATTACAAATTTGCCGACGGCGGAAAAACGGGGAATTATAATATTTTGC ATTGCTTCTGCCGTCACGTGCACGCTTTCGTTCTTCTATTGCCTGCAAGT ACGGTACGTACTGCTGTATCACCTGTCCTTTCGAACTACCGGTACACAGC GATGAAATTATTCATATGGTATTCCGCTGAAGTATTTTTTTTAATATACA TATGTTTTGGGGGGCAATATATATTTTACCGTATACACCGGAGTTTGTTT TTATTTTACTTTTTATGTTGTGGTAGGCATTACACCCCAGGAGTTAAAGG TGTGTGTTTGTTTTTTATTATTATTTATTTTTTGTTTGTTGTGGCAGGCA ATACGATTAATAATTGTACTGCTTTGCGGAGTATTTTCTTTTAACACAAT TTCCTTTGTTTGCATACGCCCCAATTTTCGCACCAGGCAAGGAGAAGCTG CGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGGTGCGGCC GCGCATCATCTACAAGGGGAACCCTTTTGTCGGGGGTACCAACAAGTCAG GCTCAGCCAAGAAGCCTGGCAAGAACAGCCTGTCGTACGAGCACCTCCCA GACAAGCGGACGAGCTTCGGCTACCCGGCTGGCGGCATCAGCCTCGGGGT GCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGTGGGTAACCC AGGACTTCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCGTCCCAGC GTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGGTTCCAAAAGA AGCTAATGGACCTGGCCAAGACGCTGGTGGTGATGCTTGGTGGAGGGCTG ACCCCGGTGTGCCAGCCGCTCGACCTGATCATCAACAAGGAGTTCAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig8:338576..340323+

>mRNA_P-littoralis_Contig8.69.1 ID=mRNA_P-littoralis_Contig8.69.1|Name=mRNA_P-littoralis_Contig8.69.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1044bp|location=Sequence derived from alignment at P-littoralis_Contig8:338576..340323+ (Pylaiella littoralis U1_48)
CGGTGCGCATACGAGAACGCGCAGAAGCTCGAGGTGCTGAAGTTCAGCCG
GCTAACGTGTGGTGATGGGCACCCAGTCGGAAGGCGTGGTGCGGGGAAGG
TGTTCGGCATCGACAAGAAGCTGATCCGGGACTGGGAGAGCCAGGAGGCA
GAGCTTGTGGCGTTTTCGAAGAAGGAGAACGCAAGCAAGCAGCGGTCGTT
GCACACTGGACGCGAGGCTGACACGAAGGAGGTGGAGGTGGCCATAGTGG
ACGAGATCAACACGCTCAGGAAAAACGGTGCTGCTGTGACCCGGGACCTC
GTCATGGCCAAGCTTCTCTCCGAGATGCCAACCTTTTCAGGGGGCATGCC
GTCCCAAGACGAGCCGGAGAAGATGGAAAAGTTTCAGAAGCGTTTCAACG
CCTGGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATCCGACGCAAG
ACGAGCGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAAGGCGTGGGC
ATTCATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGCAGGAAGCCA
TCTTCGCCCTTCTGTACAACATGGACCAGACCCCGATCCAGGCTGAGATG
CCGCCGGACACCACGGTGGAGAAGACTGGTACGAAGGGCGCTTGCATCAC
GACAGGAGGTGAGACGGAGAAGCTGCGGTACACCGTGGTGCTAGCTGTCC
GGGGTGATGGACAGAAGGTGCGGCCGCGCATCATCTACAAGGGGAACCCT
TTTCGGACGAGCTTCGGCTACCCGGCTGGCGGCATCAGCCTCGGGGTGCA
GAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGTGGGTAACCCAGG
ACTTCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCGTCCCAGCGTT
CTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGGTTCCAAAAGAAGC
TAATGGACCTGGCCAAGACGCTGGTGGTGATGCTTGGTGGAGGGCTGACC
CCGGTGTGCCAGCCGCTCGACCTGATCATCAACAAGGAGTTCAA
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