mRNA_P-littoralis_Contig8.46.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig8.46.4
Unique NamemRNA_P-littoralis_Contig8.46.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: D8LB53_ECTSI (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB53_ECTSI)

HSP 1 Score: 495 bits (1275), Expect = 1.740e-174
Identity = 235/257 (91.44%), Postives = 243/257 (94.55%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKNMAKTEAF-NTKSKRYTSVGDTDSEAVFVYFLNRLLDTFPDGPPSMADVFVELKRLWKDLCRETGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 794
            MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSP+ANLIC YPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAK+ A    F  TKSKRYT VGDTDSEAVF +FLNRLLD FP  PP+MADVFVELKRLWK+LC E+GVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQL+DDDCEVDFNTVT+PSDRVAVIATAPLTTNE
Sbjct:    1 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPIANLICNYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKDPATRALFLQTKSKRYTPVGDTDSEAVFCFFLNRLLDAFPHAPPNMADVFVELKRLWKELCSESGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLIDDDCEVDFNTVTTPSDRVAVIATAPLTTNE 257
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: A0A7S1J865_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J865_9EUGL)

HSP 1 Score: 312 bits (799), Expect = 4.220e-102
Identity = 155/259 (59.85%), Postives = 189/259 (72.97%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKNMAKTEAFNTKS-KRYTSVGDTDSEAVFVYFLNRLLDTFPDG-PPSMADVFVELKRLWKDLC-RETGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 794
            MCQL+GM  NTPTDFCFSFRGF ER G T  H DGWGVAF+EG+G R+F D LP+A SPVA L+  YPIKT  +I+H+R AT G + L NVHPF+RELWG YW FAHNGD+       +T  F  KS   Y +VGDTDSEA FVY LN L+  +P+G PP+ AD+++ ++ L++ +C RE G IFNFLL  G D L  GCWPG+RPGS V+N L+Y VRE+PF+  QL D DC +DF+ VT+P DRVAVIAT PLT NE
Sbjct:   15 MCQLLGMNCNTPTDFCFSFRGFAERAGHTDVHKDGWGVAFYEGRGLRSFLDVLPAASSPVAKLVRDYPIKTLNMISHIRYATCGSLDLHNVHPFNRELWGKYWTFAHNGDLGP-----ETRRFLAKSVSPYRAVGDTDSEAAFVYILNELVKLYPNGTPPTTADLYLSVQSLFRQICEREEGCIFNFLLCDGVD-LIVGCWPGSRPGSTVYNGLHYIVREYPFSHAQLADCDCGIDFSEVTTPDDRVAVIATKPLTENE 267
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: A0A7S3PDV2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDV2_9STRA)

HSP 1 Score: 272 bits (696), Expect = 2.180e-85
Identity = 139/260 (53.46%), Postives = 173/260 (66.54%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVP-----SAKNMAKTEAFNTKSKRYTSVGDTDSEAVFVYFLNRLLDTFPDGPPSMADVFVELKRLWKDLCRE--TGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLT 785
            MCQL+GM    PTDF FS +GF  RGG T +H  GWG A +EG+G R F D+LP+  SP+A LI  Y I+T  ++AH+R ATQG+V LENVHPFSRELWG  W FAHNG+VP     SA N+        K   ++ VGDTDSEAVF   LN L   FP+G P++  +   L  + +++  +     IFNFLLG G  T+FA  WPGARPGSEVWN L+Y +RE PF+T +L+D D  +DF TVT+P DRVAVI T PLT
Sbjct:    1 MCQLLGMNCAAPTDFSFSLKGFCRRGGATDKHSHGWGTAIYEGRGLRCFHDTLPACKSPIAELIQNYSIRTYNMMAHIRYATQGEVSLENVHPFSRELWGIQWSFAHNGEVPMFTNVSADNVPLLGWTKCKDLHFSPVGDTDSEAVFCAILNALKAEFPEGLPTLPVLHEFLSYVCEEITHDHSNDTIFNFLLGCGQYTMFAYSWPGARPGSEVWNGLHYIIREPPFSTAKLLDVDYTIDFRTVTTPQDRVAVITTKPLT 260
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: A0A7S2UCJ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCJ0_9STRA)

HSP 1 Score: 275 bits (703), Expect = 5.690e-85
Identity = 142/263 (53.99%), Postives = 173/263 (65.78%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPS-----AKNMAKTEAFNTKSKRYTSVGDTDSEAVFVYFLNRLLDTFPDGPPSMADVFVELKRLWKDLC--RETGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 794
            MCQL+GM   TPTDF FSFRGF +RGG T +H  GWG+A +EG+G R F D LP+A SPVA L+  YP+KT  ++AH+R ATQG V LENVHPF RE+WG  W FAHNG+VP       K+       N +   Y  VGDTDSEA F   LN L   F   P ++  ++  ++R   ++    E   I NFLLG G  TLFA  WPGARPGS+VWN LYYT+R  PF+T +L D D  VDF+ VT+P DRVAVIAT+PLT NE
Sbjct:    1 MCQLLGMNCATPTDFTFSFRGFAKRGGETDKHEHGWGLAVYEGRGLRTFLDPLPAAKSPVAELVERYPMKTLNMLAHIRYATQGGVNLENVHPFQREMWGIQWSFAHNGEVPKYVNKECKDYPLLGRTNRRQTFYHPVGDTDSEATFCAILNGLRAEFTTLP-TLPVLYETIQRFCSEIVSDNEESTILNFLLGCGQYTLFAYSWPGARPGSQVWNGLYYTIRRPPFSTAKLTDVDYAVDFSQVTTPKDRVAVIATSPLTVNE 262
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: A0A7S4AT98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AT98_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.990e-80
Identity = 139/268 (51.87%), Postives = 171/268 (63.81%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPS---AKNMAKTEAFNTKSKR----------YTSVGDTDSEAVFVYFLNRLLDTFPDGPPSMADVFVELKRLWKDLCR--ETGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLT 785
            MCQL+GM    PTDF FSF+GF +RGG T  H  GWG+A +EG G R F DSLP+A S +A  +  YPI+T  ++AH+R ATQGKV LENVHPF RELWG  W FAHNG+VP     K+ A+      KS++          Y  VG TDSEA F   LN L   F + P S+  ++  L+RL   L    E G I NFLLG G  T FA  WPG+RPGS++WN L+Y VR+ PFTT +L D D EVDF+  T+ +DRVA+IAT PLT
Sbjct:    1 MCQLLGMNCAKPTDFNFSFKGFCKRGGETDIHSHGWGMAIYEGHGLRTFHDSLPAAESKIAKFVADYPIQTLNMMAHIRYATQGKVALENVHPFQRELWGINWSFAHNGEVPKYSDKKSYAEYPLLGKKSQKDGTNPRDSIFYHPVGTTDSEATFCAILNALRAEFTELP-SLPLLYETLQRLCAQLVEGDEDGTILNFLLGCGQYTQFAYSWPGSRPGSKIWNGLHYIVRKPPFTTAKLTDVDYEVDFSQCTNANDRVAMIATQPLT 267
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: A0A1Z5JC61_FISSO (Gamma-glutamyl hercynylcysteine S-oxide hydrolase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JC61_FISSO)

HSP 1 Score: 256 bits (653), Expect = 4.140e-79
Identity = 139/265 (52.45%), Postives = 171/265 (64.53%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKNMAKTEAFN----TKSKRYTSVGDTDSEAVFVYFLNRLLDTFPDGPPSMADVFVELKRLWKDLCRET-----GVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 794
            MCQL+GM    PTDF FS +GF +RGG+T +H  G+G+A +EG+G R F D+LP+  SP+A+L+  YPIKT  ++AH+R ATQG V LENVHPF R   G    F HNGD PS  N+  T+ F     T+ + Y  VGDTDSEAVF   LN L   FPDG PS+      L     D+C+E        IFNFLLG G  TLFA  WPG RPGS+VWN L+Y VRE PF+T +L+D D  +DF+TV +  DRVAVI T PLT  E
Sbjct:    1 MCQLLGMNCAAPTDFSFSLKGFCQRGGKTDKHSHGFGLAIYEGRGVRCFHDTLPACQSPIADLVQNYPIKTYNMMAHIRYATQGVVSLENVHPFVRVWKGITMSFCHNGDCPSFANV-HTDHFPALGMTRDRLYHPVGDTDSEAVFCAILNALHAEFPDGLPSLP----VLHEFLSDVCQEIVRGAQDTIFNFLLGCGPHTLFAYSWPGRRPGSDVWNGLHYIVREPPFSTAKLLDVDYTIDFSTVATEQDRVAVITTKPLTQEE 260
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: A0A7S2P4J9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4J9_9STRA)

HSP 1 Score: 257 bits (657), Expect = 5.080e-79
Identity = 145/270 (53.70%), Postives = 166/270 (61.48%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPS-AKNMAKTEAFNTKS-KRYTSVGDTDSEAVFVYFLNRLLDTFPDGP--PSMADVFVEL-KRLWKDLCRETGV---------IFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 794
            MCQL+GM   TPTDF FSF GFR+RGG T +H DGWG  F+EG+G R F DS  +A SP+A+LI  YPIKT  ++AH+R AT G V LENVHPF RE+WG  + FAHNGDVP   K+       + +  K Y  VGDTDSEAVF   LN L   F   P  P + D    L K +  D C  T           IFN LLG G    FA  WPGARPGS  WN L YTVR+ PF T +L D D  VDFN VT+ SD VAVIAT PLT NE
Sbjct:   90 MCQLLGMNCATPTDFVFSFSGFRQRGGLTDKHSDGWGCIFYEGRGVRAFHDSSAAAESPIADLISNYPIKTLNMLAHIRYATTGAVALENVHPFQREMWGIIFSFAHNGDVPKFGKDRMHPWIGDVRGEKTYNPVGDTDSEAVFCAILNALRAKFKTLPTMPVLYDAIAALCKEIVTDTCGSTEEDSRNPDDPPIFNMLLGVGQHVQFAYSWPGARPGSTCWNGLCYTVRKPPFATAKLSDMDYSVDFNAVTTESDCVAVIATTPLTNNE 359
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: E0UBT8_GLOV7 (Glutamine amidotransferase class-II n=1 Tax=Gloeothece verrucosa (strain PCC 7822) TaxID=497965 RepID=E0UBT8_GLOV7)

HSP 1 Score: 249 bits (636), Expect = 3.600e-78
Identity = 131/256 (51.17%), Postives = 165/256 (64.45%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKNMAKTEAFNTKSKRYTSVGDTDSEAVFVYFLNRLLDTFPDGPPSMADVFVELKRLWKDLCRETGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 794
            MCQL+GM  N PTD CFSF GF  RGG+T  H DGWG+AFFEGK  R F D+ PSA+SP+A+L+  YPIK+  VIAH+R ATQG +RLEN HPF RE+WG+YW+FAHNG++    +  +   F      Y  +G TDSE  F Y LN L  +F DG P++  ++  LK+   DL  E GV FN+LLG G + LFA C             L+Y +R  PF+   L+D+D  VDF  +T P+DRVAVIAT PLT NE
Sbjct:    1 MCQLLGMNCNVPTDICFSFEGFCARGGKTDEHRDGWGIAFFEGKACRMFQDAKPSAISPIADLVKRYPIKSTNVIAHIRKATQGDIRLENCHPFRREMWGNYWVFAHNGNLIDMNS--ELPGF------YQPIGQTDSEKAFCYLLNILRRSFADGKPTLTQLYSVLKQT-TDLMAEKGV-FNYLLGNG-EYLFAHC----------STHLHYIIRSSPFSQAHLIDEDLTVDFQALTHPTDRVAVIATTPLTDNE 235
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: A0A127K7L8_9RHOO (Class II glutamine amidotransferase n=3 Tax=Thauera TaxID=33057 RepID=A0A127K7L8_9RHOO)

HSP 1 Score: 249 bits (637), Expect = 4.270e-78
Identity = 139/256 (54.30%), Postives = 161/256 (62.89%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKNMAKTEAFNTKSKRYTSVGDTDSEAVFVYFLNRLLDTFPDGPPSMADVFVELKRLWKDLCRETGVIFNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 794
            MCQL+GM  N PTD CFSF GFR RGG T  H DGWG+AFFEG G R F D  PSA SPVA L+  YPI++  VIAH+R ATQG+VRLEN HPF RELWG YWIFAHNG++   KN A T      + R+  VG TDSE  F Y L+RL   FP G   +A++  EL+ L  ++       FNFLL  G D LFA C           + L Y VR+ PF    L D+D  VDFN VT+P DRVAVIAT PLT NE
Sbjct:    1 MCQLLGMNCNVPTDICFSFAGFRARGGLTDHHRDGWGIAFFEGAGARVFLDPSPSADSPVAELVKHYPIRSLNVIAHIRKATQGEVRLENTHPFQRELWGRYWIFAHNGNL---KNFAPT-----LTGRFLPVGTTDSELAFCYLLDRLAQRFPQGTRDIAELHAELRVLAIEIGSHGE--FNFLLSDG-DQLFAHC----------SSRLCYIVRKAPFPVAHLADEDLTVDFNEVTTPLDRVAVIATTPLTDNE 235
[Close]
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Match: A0A3B9PL65_9RHOO (Class II glutamine amidotransferase n=2 Tax=Rhodocyclales TaxID=206389 RepID=A0A3B9PL65_9RHOO)

HSP 1 Score: 249 bits (635), Expect = 8.270e-78
Identity = 138/258 (53.49%), Postives = 162/258 (62.79%), Query Frame = 3 
Query:   27 MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFCDSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWGSYWIFAHNGDVPSAKNMAKTEAFNTKSKRYTSVGDTDSEAVFVYFLNRLLDTFPDGPPSMADVFVELKRLWKDLCRETGVI--FNFLLGQGGDTLFAGCWPGARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATAPLTTNE 794
            MCQL+GM  N PTD CFSF GFR RGG T  H DGWG+AFFEGKG R F D  PSA SPVA L+  YPI++  VIAH+R ATQG+VRLEN HPF RELWG YWIFAHNG++   K+ A        S R+  VG TDSE  F Y L+ L D FP G P+ A++   L+    +L  E G +  FNFLL  G D LFA C           + L Y +R+ PF    L D+D  +DFN VT P+DRVAVIAT  LT NE
Sbjct:    1 MCQLLGMNCNVPTDICFSFTGFRARGGLTDHHRDGWGIAFFEGKGARVFLDPAPSAQSPVAELVKHYPIRSLNVIAHIRKATQGEVRLENTHPFQRELWGRYWIFAHNGNL---KHFAPP-----LSGRFLPVGTTDSERAFCYILDTLADRFPLGTPTAAELHAALR----ELAAEIGALGEFNFLLSDG-DWLFAHC----------SSRLSYIIRQAPFPVAHLSDEDLALDFNRVTQPNDRVAVIATTALTDNE 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.46.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB53_ECTSI1.740e-17491.44Glutamine amidotransferase type-2 domain-containin... [more]
A0A7S1J865_9EUGL4.220e-10259.85Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3PDV2_9STRA2.180e-8553.46Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2UCJ0_9STRA5.690e-8553.99Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4AT98_9STRA1.990e-8051.87Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A1Z5JC61_FISSO4.140e-7952.45Gamma-glutamyl hercynylcysteine S-oxide hydrolase ... [more]
A0A7S2P4J9_9STRA5.080e-7953.70Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
E0UBT8_GLOV73.600e-7851.17Glutamine amidotransferase class-II n=1 Tax=Gloeot... [more]
A0A127K7L8_9RHOO4.270e-7854.30Class II glutamine amidotransferase n=3 Tax=Thauer... [more]
A0A3B9PL65_9RHOO8.270e-7853.49Class II glutamine amidotransferase n=2 Tax=Rhodoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:233083..239307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LB53
PFAMsGATase_4
Model size1066
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue4.18e-176
EggNOG OGsCOG0121@1|root,2RXQT@2759|Eukaryota
Ec32 ortholog descriptionPutative glutamine amidotransferase type 2
Ec32 orthologEc-27_005170.1
DescriptionGlutamine amidotransferases class-II
Cds size915
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.46.4prot_P-littoralis_Contig8.46.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig8 233208..239281 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791633.51092-UTR-P-littoralis_Contig8:233082..2332071680791633.51092-UTR-P-littoralis_Contig8:233082..233207Pylaiella littoralis U1_48UTRP-littoralis_Contig8 233083..233207 -
1680791633.6065078-UTR-P-littoralis_Contig8:239281..2393071680791633.6065078-UTR-P-littoralis_Contig8:239281..239307Pylaiella littoralis U1_48UTRP-littoralis_Contig8 239282..239307 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791633.5239112-CDS-P-littoralis_Contig8:233207..2333991680791633.5239112-CDS-P-littoralis_Contig8:233207..233399Pylaiella littoralis U1_48CDSP-littoralis_Contig8 233208..233399 -
1680791633.5421233-CDS-P-littoralis_Contig8:233858..2339951680791633.5421233-CDS-P-littoralis_Contig8:233858..233995Pylaiella littoralis U1_48CDSP-littoralis_Contig8 233859..233995 -
1680791633.5528789-CDS-P-littoralis_Contig8:235363..2354831680791633.5528789-CDS-P-littoralis_Contig8:235363..235483Pylaiella littoralis U1_48CDSP-littoralis_Contig8 235364..235483 -
1680791633.5631778-CDS-P-littoralis_Contig8:236505..2366691680791633.5631778-CDS-P-littoralis_Contig8:236505..236669Pylaiella littoralis U1_48CDSP-littoralis_Contig8 236506..236669 -
1680791633.5747008-CDS-P-littoralis_Contig8:237073..2373511680791633.5747008-CDS-P-littoralis_Contig8:237073..237351Pylaiella littoralis U1_48CDSP-littoralis_Contig8 237074..237351 -
1680791633.5897408-CDS-P-littoralis_Contig8:239257..2392811680791633.5897408-CDS-P-littoralis_Contig8:239257..239281Pylaiella littoralis U1_48CDSP-littoralis_Contig8 239258..239281 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig8.46.4

>prot_P-littoralis_Contig8.46.4 ID=prot_P-littoralis_Contig8.46.4|Name=mRNA_P-littoralis_Contig8.46.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=305bp
MCQLMGMQANTPTDFCFSFRGFRERGGRTGRHVDGWGVAFFEGKGFRNFC
DSLPSALSPVANLICTYPIKTRTVIAHVRMATQGKVRLENVHPFSRELWG
SYWIFAHNGDVPSAKNMAKTEAFNTKSKRYTSVGDTDSEAVFVYFLNRLL
DTFPDGPPSMADVFVELKRLWKDLCRETGVIFNFLLGQGGDTLFAGCWPG
ARPGSEVWNSLYYTVREFPFTTCQLVDDDCEVDFNTVTSPSDRVAVIATA
PLTTNEASAGASASASGHYCFDSRQSFAHLVMGSCMCATPRPKEETDGPI
DVSC*
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mRNA from alignment at P-littoralis_Contig8:233083..239307-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig8.46.4 ID=mRNA_P-littoralis_Contig8.46.4|Name=mRNA_P-littoralis_Contig8.46.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=6225bp|location=Sequence derived from alignment at P-littoralis_Contig8:233083..239307- (Pylaiella littoralis U1_48)
TCTCTCTTCCTCGTCTACAGCACGCCATGTGTCAACTGATGGGCATGCAG
GTGAGCGCCGGCAGCATTACACTTCACGACCTCCCATCTGATCCGTTCCC
GACCCTGTGATCTCAAACCTCAAACCTCCCCCCGAAATGTGGGGGTGCGG
TGTAACCTCCCATTCGCCCATCTGTGACAGAAGTTATTTAGTGAAGTGCA
GGAATGATAGCACAGAATGTTAGCGTGTACCAGGTACCTGGTAGGCAATT
CTGTCCGCCGTTTCCTGCTATCGTTCGTGCTCTACGAATCCCCGAACACA
GCAGTGGGAGCTCACATGTTTTACTGTGAGGATAAGCTGCGATATGTGTA
TTTGGGGTTGTCTCGTTGCAGCAGAGCAGTGAATGTCACCCTTTCGCTCC
CACACACTGCTGCCTCCAAAACAATACAGCAGTACTGCTTTACCTGTACA
GAGAAATAGTTTAACGGCGTAGCAGTCACACCAGCTGCCATATCGTCCCA
CGCACTGCTGCTTGTAGCAAACTGGTGACATGTGTCTCAGCAGGCTGTGT
AGCGAAGGTCATAGGAAATCAAACGAACGCGTTCATGTTTGTGTATTTCG
TGTTCCCTTCGAATTATAAATTGCGGTAATGACGCAGAATCGACACAAAC
ATGTACCGGCAGGTTTTACTATGGAGAGGCGGCAACCAAATACGACATAC
CGGTAGTCCAAATGCAGCAGCACTGCTGCGGTATCCTAGCCCCTGTTGTA
ATGCATCATAGATCAGTTACATGAGTGTTATTTTGGGGGTTGGATTGGCC
TACTGTCTGTCTCGGCAGCTGGGGATCCAGTAAATAAATTTGATCCGGCA
CGGAACGATTCCCCATCTTCCGTTCCCCCTTTATTATCACTTGGGAAACC
TCTCGTCTGCCCCATCTGGATCACTTTTCTTCCATCCCCTTCACAAGCAC
GAAGACAGATCAGAATATACCGGTAGTAGGGAACATAGAGACCTCTCACG
AAACAGTTGTCTCGGAGATGGCAACCCTCTGCCTTCTGGTTCGTCACTGC
TGTGGAAGAGATCACTTCCTGCAGCTAAGGAGATCAAGGAGAAAACCTCC
CGTGATACGTAAAAAGCAGCAGAAAGACCGGGGACCCAGGAGAGAAAATC
AGACCCGGCACAAAACGATTTCCATCTTCCCCCCTCACCCCCCCTGTGAC
TGAGGACACGACAGTCCCTCTAGATGATTGTCCATCCTTGTCTAAAAATC
ACAAAAAACACCAAAGAGTACGAAAAAACAGATACTTCTTTAAGTACCTG
GTATATAATAGGCGGCGAGACAGCCGTCAACTAATACTCCGTATGCTGTT
CCCTAGCCATTGTAATGTATTGCAGTTCTATCGCGTTCCCGCGGTTCCCG
AGCCTACGATACACCAACCGCGCCACAACTCAAGCCGTTTATATCAGAAA
GTGTAGCAAAATTCATACCACACACACACACACACGCGCACGCGCACGCA
AAGAGCGTTGGTACTGTTTTTTTTGCTTTTTTAGTTTTCTCGGAGACAAC
AAACATCGAAAAATATGTCCTGCCAGCCCCGAACTGTAACGTCGCCTCCA
CAGCACATACGGTAATATGACACTGTATGTCTTCGCCAAATTCTGGAAAA
GGAGCTGTCTTTGCCAAATTCTCGAAAAGGAGCCGTGCTTGGCATGAAAC
CAGGAACTTGGTGCACATAACGGCACCCTCTCGTGTAACGTATATCGCAA
TCACTTCCTCCCCCTCCACCCAAAACCCATAATATCACATAGTGGCACCC
TCTCGTGTAACGTAACGCATAATATCCTATCTACATACACATTGTGGTAC
CGTTTCGTGTTTAGAATAGAAGTCACCATGCCGTCATCCCACTCCCCATC
AACCACTCTTCCCTCGTCTCTCGGATCGATTTTTGTTCTTTTTTTTTTGT
GACCAGGCGAACACGCCGACAGACTTCTGTTTCTCGTTCCGGGGTTTCCG
CGAGAGAGGCGGGCGCACGGGGCGCCACGTCGACGGCTGGGGCGTGGCCT
TTTTCGAGGGGAAAGGCTTCAGAAATTTCTGCGACTCTCTTCCGAGCGCC
CTGAGCCCGGTGGCGAACCTCATCTGCACGTACCCGATCAAGACGAGGAC
GGTCATCGCGCACGTTAGGATGGCCACCCAGGGGAAAGTTCGCCTGGAAA
ACGTGCACCCGTTCTCTAGGGAGCTGTGGGGGAGGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTATTCGTGTGTGTTTCATGTCTTCCTAGGGTGTGC
CGTCATGAAGGTTCGAGGTGCAGAACGGTTCAAGGTTCGAGGTGCCGAAC
GGTTCACAAAGACGCTCCACCCGTTGTTAATTAGCACAGCAGCCAAGCCG
AGGGTGCAGGTATAGCCTGTGCGAGTAAAGACTACATCGTTCCACTCCAT
TATGTTGTCACCGCTGCCTCCTCTTATTCTGCTGCTGTTGAGGTACAGTA
ATCTTATCACCGAACTCGGAAACAAACTCTCACCCGACACGCTTCCCGCC
TCCCCCTGCCCCCACCCCCGTCATCAACATCTTAAACATTCCTTTCCGCC
ACGGGGCTACGGCTGCACGACTCACGGAACATCGACAGCTACTGGATATT
CGCGCACAACGGCGACGTCCCCTCGGCCAAGAACATGGCCAAAACCGAGG
CTTTCAACACCAAGAGCAAGCGGTACACGTCCGTGGGGGACACCGACAGC
GAAGCCGTGTTCGTTTACTTCCTCAACCGCCTCTTGGACACATTTCCGGA
CGGTGAGGGGCATGCTTGGATGTGATAGGACATACATTGTACTTCGAAGT
ATACCCTTTTTTGACCGGTAAAAGCCCAGCGAATACCTTTCCGGGTCGCA
AGAGCCATGCTTGGATATCGTAGGATTTGTATCCAGGATGTTTACCCTGT
TATGACTGGTAAAGTTGTTGTGTTTTTTATTTTCCGGTCGGATACCCGTT
TTTGACCGGTAGAAGCCCCTTGGATATCTTTCAGGGTGGCAAGAGCCATG
CTTGAAGATATCGTCGGGTATTTACCCTGTTTTGACCGGTTAAAAAATAT
TTTATTTATGATCCGGTTGGGTACCCCGGTAGCTGCTGGTGGAAGCTCCT
TGGATACCTTCCCGGACGGTGAGAGCCATGCTCGGATAAGATACATACCC
TTTCTTGACGGGTAAAATCCTCTCTGTGAAAATCCAATTGGATACCTCTT
CGACCGGTCAAGGCCCTTGGAGATGTGCAAGCCCGTTCGATATTATTCAA
ATATATTTTTTCAGCGTCGAAGAAAACTTTTGTGTGACAAGTGCAATTGG
GTACTGCTGTACCCATTTCGACCCGAGTGTTTTTCCGTAACGCGAACCAC
TTTTTTAGTAAGCGCTAATCGTCGCACCCTCTTCTACCTCGCTCGGTGGA
CGCGACCCACGAGCGTGATGCAGCAGCAGCAGCAGCAGCAGCAGTGGCAA
CAGAGAGGAGCGCCCAACGTACTTTTGTGGGAGTAGGCCCCACGTGTGAA
AACAAACGACAAAGTTTTCCATGTTCAATGAGATCCGAAAACGATGGCCG
AAGAGCTACTGCAGTAGACAACAAACATTTCGAATCATAAGCTTAGTATA
TCGTGTGTCTCCAACGCTACGATATGTATATTGAGAAGGGAGAAGGGAGC
CCACTGATATCTTAGCTGTGTTGTTTCTGAACATGAAATCCTTACAAGTA
TTGTTCGAAACATTCTCAAATTATCCAAACCCCAACCCCCCCCCCCCCCC
CCCACCCCCTCCCCCCATTCGCAGGGCCTCCGAGCATGGCGGACGTGTTT
GTCGAGCTGAAGCGGCTGTGGAAGGATTTGTGCCGCGAAACGGGAGTGAT
ATTCAATTTTCTGCTGGGGCAGGGAGGGGACACCCTCTTCGCGGGTGAGA
ATTAATTAATTCATTATTTACTTGTACGTGTGCATGTTTGCGGAAACCCC
GGGCGGAAACCCCGGGTCGTGTACTCTTGAGGACATCATCCCCGATTACG
ACTGCTGCGTACTCTGTGCTAAAACCTCTTTTTATATGGTACTTCAGAGT
TTAAACCTTGACGCACGTTGAGCTTTCGAGAGCCCAAAAAACACTCTTTG
GGAACAATAACCCTAACCCTAACCCTAAACCTAGCCGTACACCTGGCGTG
CTATCTATACTCTACACCATCAACGCGGTCATTTTTTTGTTTTCTGGACG
CATACGTATACGCTCGTACGTACGTATGCATGTATATACCGAGAAAACGT
GCGTTGATACGATTGCCTTTAGATCTTGGAGACCTGCTGTACGATATATC
TTTTGTAGCCAAAGCAGCTATGGATTTGATGTTCGGATCATACTTTTGTG
TATGAGAGATGGCGGTGGCTAAACCAAAAACCCCGGGAACACGTGGGGCG
CAACCATGCCAACATGGCAATCCTGACCCGCGCAGCAAACTCGGCTCGTG
GCGAGTCCTGGCTGGCTCCTGATCGATGATCAAACAGCAGGAAGGGTGGT
TGTCGTTGTGCCTCTGCGAAAATCAGCCGAGAACAGCAACGTCAGTCATT
CTTGTATCATGCGTACGTCGACCACGGATCATTAGGTAGGTAGGAAAATA
TTGTGTCGCGTATCATTCGAGAAAACAACTACAGTAGTACTTCGTAATTT
ACTTCGTATGTCACACCCACAGAACCCCGTCTTTGCCGAGTCTCGGAGCT
CGATATGTCTCTCTGCAGGAAGAGAGGGGCGTAGGCGCCGACAAGCGTGG
TATTGGAATTATATCGACTCGATGATCAAGCAGCACGAAGGCTTGTGGTT
GTACCTGCGTAAAGTCAGCGAGCGCAACAACAAGCGCCGTTGTCTTGTAT
CTGCATCAGACAAGAGCCATGCGGTAGAAAAGCATGCGGTACATTCCCCC
CCCCCCCCCCCCCCTCGCCCCGGTCTATTTTTCGTTTTTCGTTGTAAGTG
ATTTCTCCACAGCAAGAGGAGTGCCGACGCCAATAAGCGTGGTGTTGTGG
AATTATCTTGATTCGTTTTGTGCGGGTGGGAGTCCCTCACTGTAACGGCG
GAGATTGGTTGATGTGACGTGATGGGATGGGATGGGATGGGATGTGGTGC
GATGGAATGGGATGGAATGGGATGGAATGGGATGGAATGGGATGGAATGG
GATGGGATGGGATGGGATGGGATATGATGCGATGAGATGTGACGGGATAT
ACTGCTGTGCTGTGCGGGGTCTCTTCCTTGGCCGACGCGGAACGTAAATC
GTTTTGTCACAGGGTGCTGGCCTGGGGCAAGGCCCGGGTCCGAGGTGTGG
AACAGCCTGTACTACACCGTCAGAGAGTTTCCGTTCACAACTTGTCAGCT
CGTCGACGACGATTGCGAGGTGGACTTCAACACCGTCACTTCGCCCAGCG
TGAGTTGCAACGAAGTTCCATTGCCGTGCGGATATTTCTCTACCAGTCTG
CTGCTGCTGCTGCTGCTGCTGCTGCCTGTTGCTGCCTGTGGCCGACTGTA
ATTTTTGTCACTGTTTTTTGTTGTGGCTGCTTCTGCCTGTTGCGATTTAT
AGATGGGTTTCAACACCACGGCGGCGTATGGCCGACCGCGGCGGCGTATG
GCCGACCTCGAATAGTTCTGCTGCAGCGGCCTTGTCGATATTTACTGCTG
CGGCGCTCGGCCGTATGATAGATATCCCACATTAATTTGTTTCCCCCACG
AACAAAGATGGGCAGCGAACCCCCCCGCCCGAAACACGCGTGAACAACAG
CCCCCAACTGACTGATTGCTGTGCGTGGGTGGTGCGCTTTCTCTTGGCCT
TCGTTGTTGTTGATGGATGCGCCGCTGTACCCTCGACCCCCACTCCGCCA
CTTGACAGGATCGAGTCGCGGTCATTGCCACGGCTCCGTTGACCACAAAC
GAGGCAAGTGCAGGTGCAAGTGCAAGTGCAAGCGGTCACTACTGTTTCGA
TTCTAGGCAGTCTTTTGCCCATCTAGTTATGGGGTCGTGCATGTGTGCCA
CTCCACGGCCGAAGGAAGAAACGGATGGGCCGATCGATGTCTCCTGCTGA
TTATTTATGCCGCCCGGCACAGGGTCTTCGCTGATGGTGCAACAACGATT
TTTTTTTTTTTCTCGTGCCGAACCTCTCTCGGAGGCTGCCTCTTTTTGCC
GTTTGAATCCGACTCAAGATACCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig8:233083..239307-

>mRNA_P-littoralis_Contig8.46.4 ID=mRNA_P-littoralis_Contig8.46.4|Name=mRNA_P-littoralis_Contig8.46.4|organism=Pylaiella littoralis U1_48|type=CDS|length=915bp|location=Sequence derived from alignment at P-littoralis_Contig8:233083..239307- (Pylaiella littoralis U1_48)
ATGTGTCAACTGATGGGCATGCAGGCGAACACGCCGACAGACTTCTGTTT
CTCGTTCCGGGGTTTCCGCGAGAGAGGCGGGCGCACGGGGCGCCACGTCG
ACGGCTGGGGCGTGGCCTTTTTCGAGGGGAAAGGCTTCAGAAATTTCTGC
GACTCTCTTCCGAGCGCCCTGAGCCCGGTGGCGAACCTCATCTGCACGTA
CCCGATCAAGACGAGGACGGTCATCGCGCACGTTAGGATGGCCACCCAGG
GGAAAGTTCGCCTGGAAAACGTGCACCCGTTCTCTAGGGAGCTGTGGGGG
AGCTACTGGATATTCGCGCACAACGGCGACGTCCCCTCGGCCAAGAACAT
GGCCAAAACCGAGGCTTTCAACACCAAGAGCAAGCGGTACACGTCCGTGG
GGGACACCGACAGCGAAGCCGTGTTCGTTTACTTCCTCAACCGCCTCTTG
GACACATTTCCGGACGGGCCTCCGAGCATGGCGGACGTGTTTGTCGAGCT
GAAGCGGCTGTGGAAGGATTTGTGCCGCGAAACGGGAGTGATATTCAATT
TTCTGCTGGGGCAGGGAGGGGACACCCTCTTCGCGGGGTGCTGGCCTGGG
GCAAGGCCCGGGTCCGAGGTGTGGAACAGCCTGTACTACACCGTCAGAGA
GTTTCCGTTCACAACTTGTCAGCTCGTCGACGACGATTGCGAGGTGGACT
TCAACACCGTCACTTCGCCCAGCGATCGAGTCGCGGTCATTGCCACGGCT
CCGTTGACCACAAACGAGGCAAGTGCAGGTGCAAGTGCAAGTGCAAGCGG
TCACTACTGTTTCGATTCTAGGCAGTCTTTTGCCCATCTAGTTATGGGGT
CGTGCATGTGTGCCACTCCACGGCCGAAGGAAGAAACGGATGGGCCGATC
GATGTCTCCTGCTGA
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