prot_P-littoralis_Contig8.28.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig8.28.2
Unique Nameprot_P-littoralis_Contig8.28.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length909
Homology
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BLAST of mRNA_P-littoralis_Contig8.28.2 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 1.300e-116
Identity = 624/884 (70.59%), Postives = 658/884 (74.43%), Query Frame = 0 
Query:   42 GRFREDWSGSSAADSGQRGGRGRGTSTTDRGGRDSYFSRGGRTGEERWGGGGARFGRGRGXXXXXXXXXXXXXXXXGDGAGWGRLDPQAVERGKILAGRIKELGNAGDFEGMLEALEEGPKNAIVCTMAISALGRAGKWKAAVQVLDGMGKGGDGSDRPDAFAFGAAINACGRAGRPVEAVALLAEMPTRKVKPDVVCFGAAIAALKEVAGTQNRSTWGVKGSDHNGGGGDAAEGGDKPIAAAAPDVEPTRAHEKALALIQEMRREGPSPNEQCYASAITACARALDPRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGMEKAYGIRPGLVSYXXXXXXXXXXXRSREAKALLNEMTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGLPVTTRRVEYIQQKIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKKVSRGAIXXXXXXXXAPARAGGKRAVEDGVE---EAGADFLAELRERFAVDTEELASDKDLDLLADDALFAADATAAVAQPPATSALSGQEETEEVAVAQAVGDSQTADFDGDDGI--------------VATAXXXXXXXXXGKEGNDTAML-LEDIKTMKIFDLKIELKDRGLRVSGNKAELLARLEEALQQPA 907
            GR RE+W GSSAA                  GRDSYFSRGGRTGEERW     RF R    XXXXXXXXXXXX  X     WGRLDPQ VE+GK+LA RIKEL  A DFEGMLEALEEGPKNAIVCT+AI+ LG+AGKW+ AV+VLDGMGKGGDGSDRPDAFA+ A INACG+AGRPVEAVALL EMPTR+VKPDVVCFG+AI AL EVAGTQNRSTWG KG+D  G      EGGDKPIA+A  D +PTRAHEKAL LIQEMRREGPSPN QCYASAITACARA DPRS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GMEKAYG++      XXXXX      R+REAKALLNEM+ER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGLPVT RRVEYIQ KI+G      XXX                                           +K  R  +               +   ED V     AGADFL ELR+RFAV+TEELASD DLDLLADD L A     A++     +       T  V V  AVGDS  +  DGDD                +A           G+E  + A L LE  K MK+ DLK+ELK RGLRVSGNKAELLARLEEALQQPA
Sbjct:  107 GRAREEWQGSSAASXXXX------XXXXXXXGRDSYFSRGGRTGEERWXXXXGRFSR----XXXXXXXXXXXXGRXXXXXXWGRLDPQTVEKGKMLAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGGDGSDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGADEGG------EGGDKPIASAVADPKPTRAHEKALELIQEMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXXXGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGGRSXXX-------------------------------------------RKNDRSRVQE-------------RTKAEDVVATTLRAGADFLEELRQRFAVETEELASDSDLDLLADDVLLAG----AISSGEVKTNGEAGAATTSVDVTGAVGDSPVSGVDGDDRTSEDGRSEADETVAEIADEAVRGDISEQGEEDTNKAQLVLEGFKAMKVTDLKVELKGRGLRVSGNKAELLARLEEALQQPA 914
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BLAST of mRNA_P-littoralis_Contig8.28.2 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 4.390e-95
Identity = 598/787 (75.98%), Postives = 634/787 (80.56%), Query Frame = 0 
Query:  136 ILAGRIKELGNAGDFEGMLEALEEGPKNAIVCTMAISALGRAGKWKAAVQVLDGMGKGGDGSDRPDAFAFGAAINACGRAGRPVEAVALLAEMPTRKVKPDVVCFGAAIAALKEVAGTQNRSTWGVKGSDHNGGGGDAAEGGDKPIAAAAPDVEPTRAHEKALALIQEMRREGPSPNEQCYASAITACARALDPRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGMEKAYGIRPGLVSYXXXXXXXXXXXRSREAKALLNEMTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGLPVTTRRVEYIQQKIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKKVSRGAIXXXXXXXXAPARAGGKRAVEDGVEEAGADFLAELRERFAVDTEELASDKDLDLLADDALFA-ADATAAVAQPPATSALSGQEETEEVAVAQAVGDSQTADFDGDDGI--------------VATAXXXXXXXXXGKEGNDTAMLLEDIKTMKIFDLKIELKDRGLRVSGNKAELLARLEEALQQPA 907
            +LA RIKEL  A DFEGMLEALEEGPKNAIVCT+AI+ LG+AGKW+ AV+VLDGMGKGG  SDRPDAFA+ A INACG+AGRPVEAVALL EMPTR+VKPDVVCFG+AI AL EVAGTQNRSTWG KG+  N GG       D P+AAA    +PTRAHEKAL LIQ+MRREGPSPN QCYASAITACARA DPRS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GMEKAYG++      XXX        R+REAKALLNEM+ER XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGLPVT RRVEYIQ KI+G    XXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXX          XXXX     +  GG +A  DG EEAGADFL ELR+RFAV+TEELASD DLDLLADD L A A++   V       A+     T  V V  AVGDS  +  DGDD +              +A           G++ N   ++LE  KTMK+ DLK+ELK RGLRVSGNKAELLARLE+ALQQPA
Sbjct:    1 MLAARIKELAKARDFEGMLEALEEGPKNAIVCTVAITCLGQAGKWREAVEVLDGMGKGG--SDRPDAFAYAATINACGKAGRPVEAVALLTEMPTRRVKPDVVCFGSAIFALGEVAGTQNRSTWGRKGA--NEGGXXXXXXXDMPMAAAVAGPKPTRAHEKALELIQDMRREGPSPNSQCYASAITACARAHDPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGMEKAYGVKXXXXXXXXXISGLSRAGRAREAKALLNEMSERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLPVTKRRVEYIQAKISGGGGRXXXXXXXXRSRVKERTKAEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXVAQGKSGKGGSQAA-DGEEEAGADFLEELRQRFAVETEELASDSDLDLLADDVLLAGANSYGEVETNGEAGAV-----TTSVHVTGAVGDSPVSGADGDDRMPEDGRSEADETVAEIADEAVRSDISGQGEDTNKAQLVLEGFKTMKVTDLKVELKGRGLRVSGNKAELLARLEKALQQPA 773
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.28.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB51_ECTSI1.300e-11670.59SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KL58_9PHAE4.390e-9575.98SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 869..903
e-value: 2.8E-8
score: 43.5
IPR003034SAP domainPFAMPF02037SAPcoord: 870..903
e-value: 2.8E-9
score: 36.5
IPR003034SAP domainPROSITEPS50800SAPcoord: 869..903
score: 10.944932
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 300..360
e-value: 6.8E-6
score: 26.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 385..418
e-value: 9.7E-9
score: 32.9
coord: 205..237
e-value: 1.2E-5
score: 23.2
coord: 526..557
e-value: 3.8E-5
score: 21.6
coord: 455..488
e-value: 5.2E-7
score: 27.4
coord: 630..663
e-value: 0.0028
score: 15.7
coord: 595..629
e-value: 2.2E-4
score: 19.2
coord: 166..190
e-value: 0.0029
score: 15.7
coord: 315..348
e-value: 3.8E-4
score: 18.4
coord: 490..524
e-value: 5.6E-6
score: 24.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 382..430
e-value: 4.2E-10
score: 39.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 167..192
e-value: 0.23
score: 11.8
coord: 630..660
e-value: 0.22
score: 11.8
coord: 204..231
e-value: 0.0049
score: 17.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 628..662
score: 9.29524
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 488..522
score: 11.443655
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 558..592
score: 10.117337
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 523..557
score: 10.742131
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..382
score: 8.966401
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 593..627
score: 9.854266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 10.128299
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 453..487
score: 11.662881
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 201..235
score: 10.632519
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..417
score: 12.320559
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 135..257
e-value: 1.5E-19
score: 72.0
coord: 562..667
e-value: 8.7E-21
score: 76.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 442..553
e-value: 3.4E-31
score: 110.8
coord: 291..441
e-value: 2.8E-41
score: 143.9
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 458..609
e-value: 3.1E-16
score: 59.3
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 847..908
e-value: 1.1E-12
score: 49.4
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 867..904
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..708
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 671..754
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 445..660
coord: 382..527
coord: 142..247
coord: 293..436

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:166898..194388 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.28.2mRNA_P-littoralis_Contig8.28.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig8 166284..194475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig8.28.2 ID=prot_P-littoralis_Contig8.28.2|Name=mRNA_P-littoralis_Contig8.28.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=909bp
MGFVTTGHTAAFASPSTRWGIPIPTKTSRRGRGGGRGGGRSGRFREDWSG
SSAADSGQRGGRGRGTSTTDRGGRDSYFSRGGRTGEERWGGGGARFGRGR
GGRGGRFGRGRAGRSGRGDGAGWGRLDPQAVERGKILAGRIKELGNAGDF
EGMLEALEEGPKNAIVCTMAISALGRAGKWKAAVQVLDGMGKGGDGSDRP
DAFAFGAAINACGRAGRPVEAVALLAEMPTRKVKPDVVCFGAAIAALKEV
AGTQNRSTWGVKGSDHNGGGGDAAEGGDKPIAAAAPDVEPTRAHEKALAL
IQEMRREGPSPNEQCYASAITACARALDPRSALRLLADMREDGVPPNEVV
LNAAVDACGKGGAPDEALKLLYGMEKAYGIRPGLVSYNSAISALSKAGRS
REAKALLNEMTERGIRPDKVSFAAAMQGFAAAGDPRNTASLSLEMRSSGI
EMDVVSYGTAVSACAKAGDVQGALKLIKEMQEEGVEANNVVYNSALDACG
RAGKPKVAAKLLRKMGEAGVAPNATSYTGAIAACSRAGDGDKALEWLKVM
SEQGIAPEAICYNYAMAACGRSGSDKQAEWLLSEMRSHGVTPNRISYSAA
MFALGKAGRLPDVLGLLEEMHKEGVEADEVTYHIAVDAASIARDLGVAMD
LFREMRARGLPVTTRRVEYIQQKIAGGGGGRSGGGHKNDPSYSKERSNAV
STTTTGDGDGGDGGGGASSSSRNTAPAVKKVSRGAIHSGGGGGGAPARAG
GKRAVEDGVEEAGADFLAELRERFAVDTEELASDKDLDLLADDALFAADA
TAAVAQPPATSALSGQEETEEVAVAQAVGDSQTADFDGDDGIVATAAAEE
EEEEEGKEGNDTAMLLEDIKTMKIFDLKIELKDRGLRVSGNKAELLARLE
EALQQPAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long
IPR036361SAP_dom_sf