mRNA_P-littoralis_Contig798.35.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: D7FX94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX94_ECTSI) HSP 1 Score: 420 bits (1079), Expect = 1.240e-139 Identity = 232/301 (77.08%), Postives = 247/301 (82.06%), Query Frame = 1
Query: 187 SDSAGMDTIINDLKESPDVKVLTLKVSKCVQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSIKIHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEILLGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIEATCPERPPGPGMLE 1089
SDSAGMDTIINDLKE+PDV+VLTLKVSKCVQQVAQPAFFLRLAELAE AED+++RV LE LA VT VLE LVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQS+KIHRDQLDNNFLATVQAWM+KS KEE M+GMVVILQKILQMYASQEILLGS+ + KRTPAQLLL EIL DADKWDG+L GLS GRGMTGGV+K+GLLGAIQVAVE+VILQQENGSMAQRVQAEFLSELCKRIEA CPE+P GPGMLE
Sbjct: 2 SDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEQQRVKLENLATQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSMKIHRDQLDNNFLATVQAWMEKSGKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAGEADAAAPK---------------------KRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVTKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEAACPEQPLGPGMLE 281
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A6S9G5L4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9G5L4_HETAK) HSP 1 Score: 165 bits (417), Expect = 4.220e-42 Identity = 98/262 (37.40%), Postives = 157/262 (59.92%), Query Frame = 1
Query: 262 VSKCVQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSIKIHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEILLGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIE 1047
++K +++VA P+FF+ +A+ A+ A D ER AL +LA T +L+ L++ AE +MD + +++ +V SAAE +G+FLVPLS ER TA++ ++ ++LD+NFL+TV WM K ++E+ M+GMV ILQ++LQ+YA+ + LG+ + G+ + L ++L +D + W G++ V R S + L+GAIQVA+E V++QQENGSM+QRVQAEFL EL + ++
Sbjct: 74 IAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWM-KKAEEDKMDGMVGILQRVLQLYAANALKLGAPRR----------------------------------EGEAPASSQLFDDLLDSDPELWRGLVRKGLVEERRC----SADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVK 296
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A7S1ZNW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNW5_TRICV) HSP 1 Score: 166 bits (419), Expect = 1.290e-41 Identity = 113/294 (38.44%), Postives = 162/294 (55.10%), Query Frame = 1
Query: 202 MDTIINDLKESPDVKVLTLKVSKCVQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAEKN-GEFLVPLSEERLTALRQSIK-IHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEIL---------LGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIEA 1050
MD +I L + + L VSK ++ V+ P FFLR+AE A+ +D E+ L L+ + LE +V E+++D+ + +++ VV +AAE + GEFLVPLS ER+ A+R+++ I LD FL+TV AWM+KS ++GM+GMV ILQK+LQ+YA EI +G++ G S G+ PA LL ++ TD D WD L S+ GGVS + ++G +Q +E V+L ENGSMAQRVQAE+L EL RIEA
Sbjct: 99 MDDMITKLSNAKPYE-LPQAVSKAIRVVSSPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNKSH-QDGMDGMVAILQKVLQLYAGVEIKRARARLQASVGAAVSGQSQGQADEVVAEQEK-------------------GETPPAAALLERLMDTDPDSWDAELR-RSLAAEQEEGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEA 370
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A7S1ZMP8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMP8_TRICV) HSP 1 Score: 158 bits (400), Expect = 2.460e-40 Identity = 105/270 (38.89%), Postives = 151/270 (55.93%), Query Frame = 1
Query: 274 VQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAEKN-GEFLVPLSEERLTALRQSIK-IHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEIL---------LGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIEA 1050
++ V+ P FFLR+AE A+ +D E+ L L+ + LE +V E+++D+ + +++ VV +AAE + GEFLVPLS ER+ A+R+++ I LD FL+TV AWM+KS ++GM+GMV ILQK+LQ+YA EI +G++ G S G+ PA LL ++ TD D WD L S+ GGVS + ++G +Q +E V+L ENGSMAQRVQAE+L EL RIEA
Sbjct: 1 IRVVSPPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNKSH-QDGMDGMVAILQKVLQLYAGVEIKRARARLQASVGAAVSGQSQGQADEVVAEQEK-------------------GETPPAAALLERLMDTDPDSWDAELR-RSLAAEQEEGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEA 249
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A7S2AZA7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZA7_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.450e-39 Identity = 96/255 (37.65%), Postives = 146/255 (57.25%), Query Frame = 1
Query: 283 VAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSIKIHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEILLGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIE 1047
V+ P FF+R+AEL++ A+ + E++AL LA + LE +V+ EEK+D +S+LLQ ++ AAE +GEF+VPL+ + ALR+++ +R LD++FL+TVQAWM K + + G+EGMV ILQ++LQ+YAS ++ S S+ + LL ++ T +D WD +L + G + S E LL +Q +E V+L QE GS +QRVQAEFL EL +RI+
Sbjct: 3 VSSPTFFVRIAELSDAAKSEDEKMALSSLATNLVNTLEVIVQRTEEKVDGASTLLQEILAVAAEDDGEFMVPLAPAKAAALREAVLENRASLDDSFLSTVQAWMRKCT-DNGLEGMVTILQQVLQLYASSMLIADDSVNADSEA---------------------------------ASSAALLDKVFATSSDGWDALLRESLL---GDSPVCSSELLLAEVQARIETVVLAQEAGSYSQRVQAEFLRELSQRIQ 220
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A7S4UFJ3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UFJ3_9STRA) HSP 1 Score: 154 bits (390), Expect = 7.540e-38 Identity = 111/294 (37.76%), Postives = 159/294 (54.08%), Query Frame = 1
Query: 202 MDTIINDLKESPDVKVLTLKVSKCVQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAE-KNGEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEIL---------LGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIEA 1050
MD +I L ++ + L VS+ V+ V+ P FFLR+AE A+ A D E+ L LA + LE ++ E+++D+ + ++ VV +AAE ++GEFLVPLS ER+ A++ ++ K+ LD FL+TV AWM+KS ++GM+GMV ILQK+LQMYA I+ +G++ G S TPA LL +++ D D WD L GG+S L+G +Q +E V+L ENGSMAQRVQAE+L EL RIEA
Sbjct: 82 MDDMITKLADAKPYE-LPNAVSRAVRVVSSPRFFLRIAERADMATSDIEKEKLSALAENLVSTLEAVLSTTEDRLDERAKEVESVVKAAAEPESGEFLVPLSAERVNAMQTTLRKLDPISLDEGFLSTVDAWMNKSH-QDGMDGMVGILQKVLQMYAGTAIVRARSQLQANVGAAVSGQSQEQADKVIAKEEEKGL-------------------TPAAALLEKLMAMDTDLWDAELRSNITA----EGGISPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEA 350
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A6U6C7N1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6C7N1_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.730e-37 Identity = 113/300 (37.67%), Postives = 157/300 (52.33%), Query Frame = 1
Query: 184 ASDSAGMDTIINDLKESPDVKVLTLKVSKCVQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAEKN-GEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEIL---------LGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIEA 1050
AS+ A MD +I L +P + L VSK ++ V+ P FF+R+AE A+ D+ + L LA V LE +V E+++D+ + ++ VV +AAE + GEFLVPLS ER A+R ++ K+ LD FL+TV AWM+KS E+GM+GMV ILQK+LQ+YA EI +G++ G S PA L +++ D D WD L GV + L+G +Q +E V+L ENGSMAQRVQAEFL EL R+EA
Sbjct: 85 ASEIAIMDEMITKLAGAPAYE-LPQAVSKAIRVVSSPRFFMRIAERADQTSDEIMKAKLGALAENVVATLEAVVSTTEDRLDERAKEVEDVVKAAAEPDSGEFLVPLSAERTEAMRAALAKLDSGSLDEGFLSTVDAWMNKSH-EDGMDGMVGILQKVLQIYAGTEIKRARAALQANVGAAVSGQSQGKADEVLAETEMEGIK-------------------PAAAFLEDLMNMDTDMWDSALA----KSFSDEDGVGPKALMGEVQRTIEGVVLGLENGSMAQRVQAEFLRELVSRVEA 359
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A7R9WEL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEL2_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.010e-36 Identity = 107/294 (36.39%), Postives = 159/294 (54.08%), Query Frame = 1
Query: 202 MDTIINDLKESPDVKVLTLKVSKCVQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAE-KNGEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEIL---------LGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIEA 1050
MD +I L ++ + L VSK ++ V+ P FF+R+AE A+ D + L L+ V LE +V E+++D+ + ++ VV +AAE ++GEFLVPL+++R+ A+R+++ K+ LD FL+TV AWM+KS ++GM+GMV ILQK+LQ+YA EI +G++ G S G PA LL +++ D D WD L+ GV + L+G +Q +E V+L ENGSMAQRVQAEFL EL R+EA
Sbjct: 87 MDEMITKLADAKPYE-LPQAVSKAIRVVSSPRFFMRIAERADQTTDKVMKAKLAALSENVVATLEAVVSTTEDRLDERAKDVEDVVKAAAEPESGEFLVPLTKDRVDAMREAMEKLDSASLDEGFLSTVDAWMNKSH-QDGMDGMVGILQKVLQIYAGTEIKRARAQLQANVGAAVSGQSQGKADEVLAEEEK-------------------GGLKPAAALLEDLMEMDTDLWDSELS----KSFSDENGVGPKALMGEVQRTIEGVVLGLENGSMAQRVQAEFLRELVSRVEA 355
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A8J2SJ09_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ09_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.640e-36 Identity = 104/285 (36.49%), Postives = 156/285 (54.74%), Query Frame = 1
Query: 223 LKESPDVKVLTL----KVSKCVQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSI--KIHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEILLGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIEATCP 1059
+KE D +V L + ++QV +P FFLR+AEL ++A D++ER L LA + L +VE AE+K+DDSS++LQ VV S AE +GEFLVPLSEER ++L++++ K+ +L L+TV AW K ++++G++GMV IL+K+LQ+YAS+ + ++ A L E+L DAD W +L+ G V K +L +Q +E+V+L QENGS +QRV AEFL EL +++E P
Sbjct: 48 IKELADTEVFNLPAKVRQETILRQVGRPQFFLRIAELCDDA-DEEEREKLTALADNLAKTLTVVVESAEQKIDDSSAILQEVVASCAEPDGEFLVPLSEERFSSLQKAVWTKMEAGELGEIALSTVDAWA-KKAQDDGLDGMVSILRKVLQLYASRVLRFDAALAAQQ---------LAEMMPPDAAEKVDLSGDAPALHPDYAAAADLYEELLAGDADAWPRLLS----ERLNGDGAVKKRNVLAIVQAQIERVVLLQENGSFSQRVSAEFLRELVQQVEKNAP 317
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Match: A0A6T8FN14_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FN14_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.680e-36 Identity = 105/285 (36.84%), Postives = 153/285 (53.68%), Query Frame = 1
Query: 202 MDTIINDLKESPDVKVLTLKVSKCVQQVAQPAFFLRLAELAENAEDDKERVALEKLALAVTGVLETLVEFAEEKMDDSSSLLQIVVTSAAEK-NGEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMDKSSKEEGMEGMVVILQKILQMYASQEILLGSSTKGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRTPAQLLLGEILVTDADKWDGMLTGLSVPGRGMTGGVSKEGLLGAIQVAVEKVILQQENGSMAQRVQAEFLSELCKRIEA 1050
+D +I L +P + L VSK ++ V+ P FFLR+AE + A D E+ L +LA + LE +V E+ +DD++ ++ +V +AAE +GEFLVPL ER+ ++R+ + +I +LD FL T+ +WM+KS ++GM+GMVVILQK+LQ+YA I +T +PA +L E+L D D WD L G + +S E L+ IQ +E V+L ENGSMAQRVQAE+L EL R+EA
Sbjct: 72 IDDMITKLLAAPSHE-LPRVVSKAIRVVSSPRFFLRIAERTDMATSDAEKDKLSELAGNLVSTLEAVVSTTEKVLDDTALDVENIVKAAAEPLSGEFLVPLLPERIASMREVMDQIESPRLDEGFLTTIDSWMNKSG-QDGMDGMVVILQKVLQIYAGTVITRARNTGDAP-----------------------------------SPAAVLFEELLNMDTDNWDFQLRNKIGEGEEL---LSSEALMAEIQRTIESVVLGLENGSMAQRVQAEYLRELITRVEA 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig798.35.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig798.35.3 >prot_P-littoralis_Contig798.35.3 ID=prot_P-littoralis_Contig798.35.3|Name=mRNA_P-littoralis_Contig798.35.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=354bp MAATAAVVRGFLSPICGGHCGGAVTATSPAVVVSRARSTSSAAWRPAPGTback to top mRNA from alignment at P-littoralis_Contig798:101667..113116+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig798.35.3 ID=mRNA_P-littoralis_Contig798.35.3|Name=mRNA_P-littoralis_Contig798.35.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=11450bp|location=Sequence derived from alignment at P-littoralis_Contig798:101667..113116+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig798:101667..113116+ >mRNA_P-littoralis_Contig798.35.3 ID=mRNA_P-littoralis_Contig798.35.3|Name=mRNA_P-littoralis_Contig798.35.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1062bp|location=Sequence derived from alignment at P-littoralis_Contig798:101667..113116+ (Pylaiella littoralis U1_48)back to top |