|
|
Homology
BLAST of mRNA_P-littoralis_Contig797.31.1 vs. uniprot
Match: A0A6H5JNP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP2_9PHAE) HSP 1 Score: 265 bits (677), Expect = 3.940e-76 Identity = 175/375 (46.67%), Postives = 225/375 (60.00%), Query Frame = 2
Query: 110 MAAVSPDEEPVSEEHRQDRAQRALRVAVVAGFIGNSQRVQESCLVLCNACREGVPLECRL-GKGVPATLLAMFLPHASQAQLP-EAPPTRVLQPRRVRKVEFTQIGDVFFS-------------MDFAGVDMSKVQWPEGTKEIRLLQFDRTVDDVTWPVNLDRLSFCVLDYK---TNFCTDGSSFNHPLSNVIFPGGLREIFLGELFDQXXXXXXXXQGLERMSLPGFXXXXXXXXXXXXLKSLEFMPPKEIQLRKNPNIRAAQLDIHHELGYNCHFTNLPASLETLWLSDAFSQNLDEINWPPGLVTLGLGIGCEPHVTDDISWPSSLRHIYSMHEID--EAPQGCVVTTVTDYDTESQSYEMEME--DAWVH 1168
MAA + +E P EEH +DRA RAL+ AVV+GF+ + + Q SCL LCNACREGVP+E L +GVP T LAM LP QAQ + PPTRVLQPRRV ++++T +++ + VD +VQWPEG KE+ LL FD+ V+ V WP L+ LSFC L + + F GS FN L FP GLREIFLG+ FDQ QGLER+SLPG XXXXXXXXXXX KSLEF PP +I LR++PN R L+ H + +N FT LPASLE LWL + F Q+L+ +NWP +++Y ++E+D E P+ C++T V DYDTESQS++ E + D W H
Sbjct: 1 MAAAAVEECP-GEEHMRDRALRALQFAVVSGFVKDYRATQASCLGLCNACREGVPVERMLIAEGVPQTRLAMVLPKVVQAQWEADIPPTRVLQPRRVLRLKWTFRTSAWWTETTEDIPNSWVRALTMGIVDFDEVQWPEGIKEVNLLSFDKEVEGVAWPKGLECLSFCALRLRCGPSGFANRGS-FNRSLVGANFPSGLREIFLGDAFDQPIEDVVWPQGLERLSLPGCNXXXXXXXXXXXXKSLEFSPPSQICLREDPNTRLDVLEPHRDR-FNSPFTKLPASLEALWLGNNFCQSLEGVNWP-SXXXXXXXXXXXXXXXXXXXXXXXXQNLYLVNEMDWLEYPESCMLTIVKDYDTESQSFDAERDGFDEWDH 371
BLAST of mRNA_P-littoralis_Contig797.31.1 vs. uniprot
Match: A0A6H5JJV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV6_9PHAE) HSP 1 Score: 251 bits (641), Expect = 3.480e-71 Identity = 172/372 (46.24%), Postives = 221/372 (59.41%), Query Frame = 2
Query: 110 MAAVSPDEEPVSEEHRQDRAQRALRVAVVAGFIGNSQRVQESCLVLCNACREGVPLECRLGKG-VPATLLAMFLPHASQAQLP-EAPPTRVLQPRRVRKVEFTQIGDVFFSMD-------------FAGVDMSKVQWPEGTKEIRLLQFDRTVDDVTWPVNLDRLSFCVLDYKTN--FCTDGSSFNHPLSNVIFPGGLREIFLGELFDQXXXXXXXXQGLERMSLPGFXXXXXXXXXXXXLKSLEFMPPKEIQLRKNPNIRAAQLDIHHELG-YNCHFTNLPASLETLWLSDAFSQNLDEINWPPGLVTLGLGIGCEPHVTDDISWPSSLRHIYSMHEID---EAPQGCVVTTVTDYDTESQSYEMEMEDAW 1162
MAAV+ E SEEH +DRA R L+VAVV+GF+ + + VQESCL LCNACREGVP+E L + VP LLAM LP+A QAQ E PPTRVL PRRV ++E+T +++ VD ++VQWPEGT+EI L+ FD+ V+ + WP+ L+ LSFC L +D SFN L FP GLREIFLG+ FDQ QGLER+SLPG XXXXXXXXXXX KSLEF P +I LR++PN R +LD+ +G ++ FT LPASLETLWL D F Q+L+ +NWP R++Y + E+D P GC VT V D D + Y+++ +D +
Sbjct: 1 MAAVAM-ENWSSEEHMRDRALRGLQVAVVSGFMKDCRSVQESCLGLCNACREGVPVERMLVREWVPQILLAMVLPNAVQAQREAEIPPTRVLHPRRVLRLEWTFRSHAWWAESTGQVPKPSAGTPSVGDVDFNEVQWPEGTREISLILFDKPVEGMAWPLGLECLSFCALRSGCGAWHVSDRGSFNRSLVGANFPAGLREIFLGDAFDQPIEDVVWPQGLERLSLPGCNXXXXXXXXXXXXKSLEFTSPLQICLREDPNTRLDELDL---VGVFDSPFTTLPASLETLWLGDEFGQSLESVNWPXXXXXXXXXXXXXXXXXXXXXXXXX-RNLYLVREVDWVERPPSGCKVTVVKD-DPDDDMYDVDYDDLY 366
BLAST of mRNA_P-littoralis_Contig797.31.1 vs. uniprot
Match: D8LHT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHT8_ECTSI) HSP 1 Score: 195 bits (496), Expect = 9.270e-52 Identity = 132/307 (43.00%), Postives = 176/307 (57.33%), Query Frame = 2
Query: 287 LGKGVPATLLAMFLPHASQAQLP-EAPPTRVLQPRRVRKVEFTQIGDVFFSM-------DFAG------VDMSKVQWPEGTKEIRLLQFDRTVDDVTWPVNLDRLSFCVL--DYKTNFCTDGSSFNHPLSNVIFPGGLREIFLGELFDQXXXXXXXXQGLERMSLPGFXXXXXXXXXXXXLKSLEFMPPKEIQLRKNPNIRAAQLDIHHELGYNCHFTNLPASLETLWLSDAFSQNLDEINWPPGLVTLGLGIGCEPHVTDDISWPSSLRHIYSMHEID--EAPQGCVVTTVTDYDTESQSYEMEME 1153
+G+GVP LA LP+ QAQ + PPTRVLQPRRV ++++T +++ +AG VD+S+VQWPEG KE+ LL FD ++ V WP L+RLSFC L Y ++ + SFN L FP LREIFLG+ FDQ GLER+S PG XXXXXXXXXXX F PP +I LR++PN R L+ H + +N FTNLPASLE LWL + F Q+L+ +NW +++Y ++E+D E P+ C+VT V DYDTESQS++ E +
Sbjct: 3 IGEGVPQIRLATVLPNVVQAQRQADIPPTRVLQPRRVLRLKWTFRSRAWWTETTEETPNSWAGASSVGNVDLSEVQWPEGIKEVNLLLFDGDIEGVAWPAGLERLSFCALRLSYGSSGFANRGSFNRSLVGANFPSDLREIFLGDAFDQPIEDVVWPSGLERLSFPGCNXXXXXXXXXXXXXXXXFSPPSQICLREDPNTRLDVLEPHRDR-FNSPFTNLPASLEALWLGNNFCQSLEGVNWXXXXXXXXXXXXXXXXXXXXXXXXXX-QNLYLVNEMDWLEYPKSCMVTIVKDYDTESQSFDAERD 307
BLAST of mRNA_P-littoralis_Contig797.31.1 vs. uniprot
Match: A0A6H5JPY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY0_9PHAE) HSP 1 Score: 142 bits (359), Expect = 6.500e-34 Identity = 105/286 (36.71%), Postives = 143/286 (50.00%), Query Frame = 2
Query: 287 LGKGVPATLLAMFLPHASQAQ-LPEAPPTRVLQPRRVRKVEFTQIGDVFFSMDFAG-VDMSKVQWPEGTKEIRLLQFDRTVDDVTWPVNLDRLSFCVLDYKTNFCTDGSSFNHPLSNVIFPGGLREIFLGELFDQXXXXXXXXQGLERMSLPGFXXXXXXXXXXXXLKSLEFMPPKEIQLRKNPNIRAAQLDIHHELG-YNCHFTNLPASLETLWLSDAFSQNLDEINWPPGLVTLGLGIGCEPHVTDDISWPSSLRHIYSMHEID--EAPQGCVVTTVTDYDTES 1129
+G+ +P TLLA+ L +A Q Q E PPTRVLQP RV+ + Q D G VD+S+VQWPEG KEI LL D ++ + W V D+ T+F + P + LR+ + LPG LKSLE P E++L + PN + + +G ++ FT LPASL TLWL D+F Q+L+++ WP GLVTLGLG D +SW S+LR++Y + EI+ E P GC V V D+D ES
Sbjct: 3 VGEWIPQTLLAIVLRNAVQVQQAAEIPPTRVLQPPRVKASD--QAPDSSADAPSVGNVDLSEVQWPEGIKEIDLLLLDEVIEGMLWWV-WSAFHSARSDFPTSF------YYFPSKTLCGHKDLRDC---------------------LYLPGCDQPIDNLWWAPALKSLESSTPSEVRLMETPNTNLHEPRL---VGVFDSPFTTLPASLATLWLGDSFCQSLEDVTWPSGLVTLGLGSTLSEF--DSVSWSSNLRNLYLVDEIEWAEYPPGCRVNVVMDFDIES 253
BLAST of mRNA_P-littoralis_Contig797.31.1 vs. uniprot
Match: A0A6H5JK73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK73_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.030e-32 Identity = 94/210 (44.76%), Postives = 123/210 (58.57%), Query Frame = 2
Query: 359 APPTRVLQPRRVRKVEFTQIGDVFFSMDFAGVDMSKVQWPEGTKEIRLLQFDRTVDDVTWPVNLDRLSFCVL-----DYKTNFCTDGSSFNHPL--SNVIFPGGLREIFLGELFDQXXXXXXXXQGLERMSLPGFXXXXXXXXXXXXLKSLEFMPPKEIQLRKNPNIRAAQLDIHHELGYNCHFTNLPASLETLWLSDAFSQNLDEINWP 967
+P T + + V K ++ + D S VD+ V WPEGTKE+ L+ FD+ + TWPV+L+RLSF Y+ D SF L +N FP GLR+IFLG FDQ QGL+R+S+P FXXXXXXXXXX L PP EI+L ++PN R +L + + +NC FT+LPASLETLWL D F +L+ INWP
Sbjct: 14 SPATSQARVKAVDKAPYSSVDDPCVS----NVDLRDVHWPEGTKEVALILFDKAFEGATWPVSLERLSFYAFRSGGQSYRVK---DIGSFKLSLVGANFSFPSGLRDIFLGAAFDQPIQDVVWPQGLQRLSVPRFXXXXXXXXXXPALN-----PPWEIRLTEDPNTRLDELGSYWDR-FNCPFTHLPASLETLWLGDKFDHSLEGINWP 210
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 3006 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 1173 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791627.7567255-UTR-P-littoralis_Contig797:71148..71244 | 1680791627.7567255-UTR-P-littoralis_Contig797:71148..71244 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig797 71149..71244 + |
| 1680791627.7676964-UTR-P-littoralis_Contig797:81648..81661 | 1680791627.7676964-UTR-P-littoralis_Contig797:81648..81661 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig797 81649..81661 + |
| 1680791627.7915628-UTR-P-littoralis_Contig797:82834..84558 | 1680791627.7915628-UTR-P-littoralis_Contig797:82834..84558 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig797 82835..84558 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791627.7769306-CDS-P-littoralis_Contig797:81661..82834 | 1680791627.7769306-CDS-P-littoralis_Contig797:81661..82834 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig797 81662..82834 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig797.31.1 >prot_P-littoralis_Contig797.31.1 ID=prot_P-littoralis_Contig797.31.1|Name=mRNA_P-littoralis_Contig797.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=391bp
MAAVSPDEEPVSEEHRQDRAQRALRVAVVAGFIGNSQRVQESCLVLCNAC REGVPLECRLGKGVPATLLAMFLPHASQAQLPEAPPTRVLQPRRVRKVEF TQIGDVFFSMDFAGVDMSKVQWPEGTKEIRLLQFDRTVDDVTWPVNLDRL SFCVLDYKTNFCTDGSSFNHPLSNVIFPGGLREIFLGELFDQPIDDVAWP QGLERMSLPGFNQPIDDVRWPPALKSLEFMPPKEIQLRKNPNIRAAQLDI HHELGYNCHFTNLPASLETLWLSDAFSQNLDEINWPPGLVTLGLGIGCEP HVTDDISWPSSLRHIYSMHEIDEAPQGCVVTTVTDYDTESQSYEMEMEDA WVHGDAPDEGSCSDVYEDDDCPFTGFAADSDYEGYDSPIM* back to topmRNA from alignment at P-littoralis_Contig797:71149..84558+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig797.31.1 ID=mRNA_P-littoralis_Contig797.31.1|Name=mRNA_P-littoralis_Contig797.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=13410bp|location=Sequence derived from alignment at P-littoralis_Contig797:71149..84558+ (Pylaiella littoralis U1_48) CGATCACCCACCCAACACGAAATCATCCACCTGCACAACACGAGTATTGC
TGGTCATTTGGTCTTGGTTTGGGCCATTCCATCGAAGCATAACTAGGTGA
GAGAAGGAGAGGGAGAGAGAGAGACAGATGCTTCTTCGGGTTCTGCGGTG
TAAGTTGGAATCCGAAGGCGTCTGACTTTTGTTGGGAAAGTCGGATTTGA
GTTTAGGCAACGGGGACAGCAGTACAGCAGTACCAAGTTGAGTTGTCCTC
GCACAGCAACGAAGTACAGCACTCGGAGTATACAACTAGCGATGACTGTA
AGGTGGTTCACATCCGTGTGAACTCTGAAGTCCTGCAGCATCGACTGCAG
AGCACGATCAAAGCAGATGTCCGGATAAAACACTCGGCATGTATACTTCT
ATGATATGTGCGACCCGCTCGCATTGTTCACTGCTCAGTCTCCCGGTTCA
GTCTCCTCCCCAGTCGGTAAAGAAATAGGCGAAGAAATAAAGCCTGCTGA
CTCTCTTTTCTTGGGATGGCGGGCGAGTGACGGGTGATGCCCACCAAATT
GTTCACTGCGGGCACCGTCTCTTTCACTGCTATCTTGGCGTTCCCTACAG
CAGTCCTCCTATGCATATGGAGCTGTGCTTTACTTCACTTTTGTCTCGCG
AAATGTTCGGCAATCATCTCTCGCTGCTCGGATTTGAATGGATCGATCCA
AGTGATCATGCATGTGTTGTGAGTTTTTTTCAAGAAGGTGCTCGCTCAAC
CCAAGACGATACAGCTGAGTACTATCGTAGGTCGCGTGAGATGACACACA
CCCTTGGACCGATTTTCAAACCTCAATTACTCCACCACGGCGAGGGTGCC
AGCATTAGACGGTTAGTTTTTGGAAATCTCTCGACGAAATGGTTTCAACG
CCGCCCTTTCCGGCACCTACACTATTTCCGCTCCGGAGTAATTGAGCTTT
AAAAATCGGTCGAAGGGGTGTGGTATCTTACGCGACCTACTGTAAGTAAT
TGGAAAAAATAAAAATACAAAATGAAAAATAAAGGGTGATTGACAAAGGG
GTATACCCCCTATCTTCTAGGAACAAAAAAGGAGTAGTGTGCCTGTCGTT
GCCGCTGAGCGGTGATGTTGCTCCTGCACCATTACCCATTTTTTGTGCAT
CGTTGATTTGAGCGAAAAAAAGGGGGTCTCCATCAACGAAAAAACCCGCA
TCAGAAAATAAAACCCCGAAGTGCCCCAAGTGTAATCTGCCTCTACCTAT
AGACGTGTCAAATTTCTCGTTCTGCTGCCTTATCTGTGCCCTACTGGCCC
TGGTTCCCTGCTTGGCATATCCTGCTCGATTATTTGATCCGAATGCGGGA
GGCTGTGCACATCAGCCTCCCTCTGCACATCCGCCTCGCTGTGTGTACAG
AGGCATCCGGCGCACAAGCATGCGCCGAAATGGCCTTGTGTGTGCGCTGG
CTGGCTCGCCTTCGTGTTGTTGAAAGATGTGTGTGTGTGGCTGGTTCCCG
TGCGTGTGTGTGTTGTTGTTCATAGCTTTATATACCATGCATGGGTAGCA
GGAGGCTACTACCTGGTCATCTTCTTGGGTCGGGGGTACTTCGCGAAGAT
CGCAAAGGTACGCGCAACTAACTAGGTACGCAGCGGCCCCATAAATCTTC
GTGTGGATACGCGGCCTGTTGTTGATTCCGCTGTGAAGGATTCCGCGAAA
GGGAAAGCTCAATGAACAAAAGGGGTAGACGGGGTTTGGATCTGCACAAA
AAGGGAGATTTGAATGAACAAAATGGGGTAGCAGATAACATGTTTGCACA
ACAGGAGGTATACCCCCTGGTTTCTTGAACAAAAAGGGGTGCACCGGTCA
CGAATTCGTACTTTTCCACGCCCAAGAAACCACGATTCCCGTGTCTAAAA
AAACACAAATGATTGGTGTGCTGCCTCCACTCCGTGTCCGTCTCGCCGAA
CTGCCACTTTTTGTTTTAGGGTCGGTACGGCCGACGTACAGTACATCAAA
CCGGCACGAAAAGCACACTACCCCTTTTTGTGCCTAAAAGTAGGGGGTAT
ACCCCTTTTTGTCAACTCCCGAACAAATGATGTCTGGAAAAGGCGTTGTT
TGTTAGCTATTGTTTGCATAAGGCTACCTCTTGTAGATCGGAAACGCCCT
CATCAGAATTCGACTTACCTCATAAGAACAATTCCAACAGGATCTTTGAG
AGAACCGCTTCTTATCAGGAAGCCCAGGTGATTTTATTTTTTTCCATGGG
TGGCTCATTTTTTTTACGTTTATCTTCCGAAAATGCATCTCCCTTCTGCG
GCTGTTCGATGTTCGACAGACGGGCAGACGGTCGACATCATTTCTTCGTC
AGCAGGCTGTACCGTATTTATTTGTTGATCCGAAGGAGTGAAGCCACAGC
AACAACAAAGCCATGCCCCGTGAGCTGTGTGCATGGTCGTGCTCCTCCGA
TGGTTGTTTGAAGCCGCGAGTCTGTGAGACAGGCTCACAAAAAACGTTTG
CAGGCATCGATGACGTGTGAAAAAAAAAAGGAAAAATGAAAAGATAAGAA
AGCCCGCAGCAGCAGCAGCAGAAAGGTATTTTGCGCCGGTTTTGCTGTAC
ACCGGTTTGGTTTTTCATCCATCCCTCTCGAACCGATTGAGCCACAGCAA
CACCAAAGCCATCGCTCGTGTGTGTCTGGTCCTTCTCCTCCGGTGGTCAT
CTGGGGCCGCAAGGCATCAACAGGCTAGCAACAGAAGCGTTCCAAAAAAT
CGATCACTTGTGAAAAAAAGGAATAAATCACCGTCTGTCTGTCTGTCAGC
TCGACTCGCTACATCAACGGCCTTTCTTTCTTAAATTTTTTTCACAACCC
ATCGATTTCTGCAACACCTCTGTTGCTAGCTATTGATTCCTCTTCCGGCC
TCAGATGATCAGCGGAGGAGAAGGACCACACACACAGCTCACTGGCGATG
GCTTTGGTATTGCTGTGGCTCAATTGGTTCGAGAGTGATGGATGAAAAAC
CAAACCGGTGTACCGGCACAAAATATCTTGCTTGTGCTTCTTCCTACTGC
TGCTGCTGCGGTTCACATCTGCCAGCTCTCTCCGCCATTCCACGCTTTTG
TTTTTCGTCCATCACTCTCGAACGAATGAATCCATGGCAACAAGAAAGCC
ATCGCCCGTGAGTTATGTGTCTAGGACCTCTCCTCCGTTGGTCATGTCAG
GCCGCGAGGCATCGATGGACTTGCAAAAATAGTTTCTCAACAGCCGACTC
ATCGTGAGAGGTTCTGGTGAGGGAGAGCCCGAAATTTTCCTGTAATCGTT
TTCTGATCGATTCGATCGATCGGAAAACGTTATTTTAAAAGTTCAGATCA
AAAATGGGCTTTTCTGACCTACAATATCGCCTCCAAACGCCCAAGATTAA
AAAAGGCAGATTCCAACAAAGGATCTCTATCTACAAGAAATAGCCTTATA
CCGAAGTTATCGCGAAGTATGATATAGTGTGAAGTACTTCGTATGATATA
ATACGAAGTATGATACACGAGAAGAAAATAAATAAATAAGAAAAGACCGT
ATCTTGCGGCACCAATTTATACTTTCCCGACCGAAAGCATGAAATCGTCA
GAAGACACCAACCATGTAGAGATGGCCGGTGTGTTGGCACGCTCAAATCT
GCTCTTCGGGCCTAGACATCGGAGGTCGAGATTGCTGTGCAGGAAGTCCA
GAAATCGTCCGCAGCCCCGAAGAACTGCCACGCTGTACTCGTTGCCGTCG
TCCCTCTGAATACATGTACAGTACGTCGAAGGACTACTGTGTGATGATTT
CGACCTCCGATATGGCGGCCCCACCAAAAGTCTGCGTGCCAACACGCAGG
TCACCACTGTATGGTGTGGCTTCCCATTCTCACTGGTCGAGAAAAGGAAC
CACGAACGCTCATTCTGAGCAATCTGCGTTACTCTCTTGGATTGATAGTA
GGTACCTCTTGTGTCTAAGATTGTTATCAACTGGATCGTAGGAATTGGAT
CGTATGGGTCAAAAAGGAAAGAAGGGTATCGTATGCACAGGAGTAGACGA
GCGTAAGGGACGGTTGAACCCCTTCTCGCGATGGAAAAGAAAAAAAAACG
AGCACCGCGGAAGGTGGGTGGAGGGAAAAAATCCTGTGTGATCTTGCGTC
TGTGTGACCCCGGCTGGTTCACCCACTTTATACGGAATGGACCAGAATGA
ATGGAATGCAAACACACACACGGGGGGGGGGGCGCTTCGACACGCCTTAT
TTTGTGTCCAAAAAATGAAAATCCATTTTGTGTAGTCAAATAGCCGCATT
TCACAATGTATAAATGAGGCTCATCTATAATCTGTTGTGCAAGGAGTGCC
GACCTTGGTGTTGATACCGCAGAAGACCATCTATGACTGCGGCTACGTAC
GTGTTTCTGTTGGCACTTCCCGATCTAGTGCGAAGATGTCGAAGGCCATA
GTCGTCGGTGAAAAAGTCCGCAAGCTGGCCGAAATCAATGGCTTGCTTTT
CACTGCTGCTGTGTTTGCCGCCACAGACCCCAACCTCCTCAACTGCTGTC
ATCCGAAGAAACAAGTGGCATCAGCTACAATATACTGCTGCTTTTGACCA
GGAGTTTCAGAGGTTGGGGTATGTGGCGGCAAGTACAGCAGTGACAAGCC
TTTTGTTTCGGTCCAGTTTGCGGACTTTTTGACCGACGGCTGTGGCCTTC
GACTTCCCGCACACCAGCAGCAGATCCGGACGTGCCGAAACGCGCAAATA
TAGCTGCCACATGGTGTCCTCAACAGATATCAACACTTAGGCCGGGACCC
CTTGCACAACATGCCTTATCTGTGTTAAAGTAAGCTGTTTTGACTCGATA
TGACAAGCAAAATATTCTCATAGCTTTTTCTGGGAGTGTTGGGATACATC
TTATGGGTTTTGGCCTTTCAAAAATGACGTTTCCAGCAGGCCCTTCCAAT
CACCCGATCGTATTTTGTCACAGCCGAACAGCAGGTCAGAAAATACTTCC
GAAAAAAAAAGAATCTCCTGTTCCGCTAGGGCGGTTTAATTGTTGACACC
TGGACATATTCATTTCGCACTGCTGTAACCGGTTTGCTCTTTCTTGGCCA
CCACTCTCGAGCGAATGAAGCAACAACAATGGTAAAGCGAGGTAAGTACG
TAGTCCCTCTGCCCGCGGTCACCTGAGGCCGCGAGGTATCGACAGACTAG
CGGAAGAGTTTGCAGGCATCATCGATGTCATGTGAAGAACTATATAAAAA
TCGATACAGCTCGAGGCAGGTGGACCATGGTGGTGTTGATTTCTTCTCTT
TTTCACAGGCGATCTATTCCTGAAATGCTTCCATCCCAGCCTATCGATGC
CTCGCTGCTTTAGACGACCACCGGAGGAGAAATACCATGTTCACAGCTCG
TGAGCCATGGCTTCACCGTTGTTGGTGGCTTCATTCGTTCAAGGGTGATC
AACAAAAATACCATACTGGTAGGGCGGCAAAGTACCTGCTGCTGCGTTGA
AGGGTCCAGAGGACAGCAGCATCAGCTAGCTGCCAGCTCTCGTCCGATCC
ATTTTGGTTTTTGGTCCATCGCTCTCGAACGAAAGAAACCACAGCAATAC
TAAAGCCATAGGTCGTGAGGTGTGCGTATGTTCCTTCTCCTGCGGCGGTC
ATCAGAGGCCTCGAGGAATCGATGGGCTTCCAAAACGAAGTTAGCAGGTC
GTCTAATCATGGCTGACTCTGACGTGGGGTTTCAAACTCCTTGACCCAAA
AAACAAATACGGATTTCAGATCGGTGCAGGCTATGAACCATAAAAAAAAC
ACTTTTTCCAATAGTCTGGGTCTATCGTAAAAAGTTATTCGAAATTGCTG
TCTAAAATAGCTGTTTCTGATCACACACATGATGGGCGATGTCGGACCAG
TATTCAAAACAGCCAAAATAAATACTTCGAAGTATCGACTTCTGACACAT
CAGATGTAGCCTTTCGCAAGCTTTTTTGTTTAAGAAAAACGTTCTTGAGG
CCCCCCCTTGAGTCCCGAACCCGCATCATGATCACACACACAAACATAAA
AATAAATAAGAGCCAGGGAGTGAAACTGTTGTCCGAGGCTGTCCGTGCGT
CTGTCTGATGCCGATTTTTCGGCCACCTTTTATGGTCAAACTAGACCAAT
ATCGAAGCACTTTACGAATCCTCGGGTGTGTACGACAGAGCTAATGTAGA
CCGAGCCTTCTCACCCGCTTCCCGCTCGTCTCGTGCTGAGTTTGTCGAGA
CAGCAGCGGTGTTGTGTGTTCATTTCTTCGCCCAAATCCACTCTATCTCC
AAAAAATGAAGGGAGGCATGTATGCCAGGTACCCTGTAGAGGGACCAGTG
TCACAGAGCACATCGCACAACGCTGCTGCTTCGCTGGTGTGTACTGCTGC
TGTGCTGCTGGGTGAATGGCTGGGAGAGACAGGGGTAGAAAGGGGGAGAG
AGGGAGAGAGTGTTGCTGTTTGTGCCTGCGACGAGTGAACCCGACTCTGC
TGCTACTATACAACAGGCGGCAGGCAGGACAACAACGCACGCCAGTACAG
CAGTCTTTAACGAAGTACTGCTGAAATTGTAGTCCAGCACACAGCACAAC
AGCTTTCCCAGTTGCTGCCCCAGCAGCAAGAGACACCACGCTTCGGTTCA
GGGGGTTGGCGGTTGACGGTGACGAAACGTGGAAGACGGCAGTCACAGAG
CTTCCCTCTCTCGCCTGGTCGTATTTTTTTAGTCAACCGCTGAAGGTATT
TTTCCTTTTTTTCTCGAACATCACGGCGATCTCCTCCTTGTCTTTCGTGT
GATACACACAGCCTACTGCAGGTACTTTTTTGGGATGGGTTGGAAAAAAG
CCATTACTTCAACCTTTGTAGTATTTCATCCGAGAGATGAACATATGTAC
AGGCTGGTATGCCATGATACCGTTGCAGCCGTACTGTGAAGGCAATGAGC
CTATCGCCGCTCTGCGTGAGACTGTGTGTGTGTGTTGTCATCCCTTTCAT
TGGACGCCACTCTACACCTTCCGGGTAGGTAGACGCTCCAACCGGGGTCA
CACAGTAGGAAGTCAACACAGAAGTTTTTTTTTTTCTCCACTTCCCACTG
CGGTACTTGCCTTCATTTTTTTTCGCGAGAAAGGGTACAGCCATCCCGTT
CCCTCGTCGACAGTTCGAATTTTGTTTTCTCACGAATTAATCGCTTTTCA
CCCTCACGCATGACATGAGAAAACCCCTGGATCGTGTTACTGCACGAGGA
TTATCAACTGCATTACCGGGACGAGGCTGAAAAATTTTATTTCGGCAGAA
GGTTTCGGGTGCGCACCGGCATGATCGACGTTCTGCATACTGCTTGGTGC
TCTTTCGGTCTTGCTCACAACCTTTAAGTCGAAAAATGCCAGCGAGGTAT
AATCCTGTCACTTGCATTACAATACTGGGCAAGTGACGAACGTGGGCAAC
CCACCCCCATTTCAGACAAAAAGGGGTGGTGGAAAAAGTGTATGGGCTCT
ATGTCCATCCCAAACCATGCCAGATATATTCCTGACTACACGGCAACACG
CCCACGGCCGTGCAAGCATGGGCATTTGCCAACTTTCCGGCATGTCTGTG
GGCCAATTTTGGCCGTGGGCAAGGTCGGCTCTACAGGACACCGCTTTTTT
GTCCGACAACGTGGGTATTAAGCTACCTTCGTTATTTCCCCTTTTGTTCC
TCACCCCCTCTTGTCCGGAACCAATTATATTGTGATCTCCGCCCTTCCAC
CGCTCATGACTCACCCTCGACGTCACCACATGGCACAACATCAATCACCT
CTCTCGACGGCTTGGATAGTTCTTCCGCACACAAACGGGGCCCCCTCAGT
TTTGGGCGTCCACCTCACGGCACGACAACCTGCCAAAGACAACAGCGGTG
ATCTACCTCATTTTTTTTTTTTTTCATAGAATAACCAGTTGCAGACCCCA
ACGGAATCCGCTAGTCGCGACCAAGCATGACAATTTCCCACGAGAATGTT
GAAGCGAAAACGATTGCTGCAGCGCTGGTCTGGACCAAGAGTTTGCCTCT
GCTGCTGCTGATGTTTCAGAACACATACCCCAGGGTCCCCGAAGATCAGT
AAATAGTGCCGGGTACCCCAAACACTTGTTCTACAGAATATGCACCTACA
GTACGTGCCACAACCGAACTCACACGCACACACAGGAACGTGCGCGCAAT
TAAATGCCAAGGCAATTGGCTCTTTACACACATGCGAACATAGAAGTATA
CTGCTTGGATTCCAACTCTCTACTCATGCACCTTTTCACAGTAGTGCACC
ACGAACAACTGTATCACACGTATGTATTTTTGGTGCTTTTTGATATCAAC
GCAGGCACTTCGCATCTTTAATACCTCTGCAAATGCACGTACCGTAATCC
GACCCTTCTCAAAATTCCGGCGAAAAAACAAAAAAATGATCGTGATGTAT
GTCGTTGAAGACAGTCTCGATGTTGTCCTTGAGCTGATGTGTTGCCAATA
TCTACCCCCATCTCCTTCACCGTGCTGGGTTTACTCAGCTTATGACTTCG
CCCTGGGCCACCCCTCGCACCGTCACTGTGTGACTGGCGTTGCGGAGCGC
ATGTTAGGTAGTGCTCGCCGGCTTACGTCCGCGTGCTGTTTTTGGAGTGT
CCGCATGTTCTATGCTGGCACATGAAGTGATACTGCTGTTTTTGGCGCAT
CCTCAATCGCTCTCTGTTGCTGTTGCTAGTCTTTGTTTTGTGACCCTAAC
TCACACAAACCTGCAATATACACACAAGAACACTTCGTTTATGACTGTTC
AAGTTTGACTGACGTTGCGACATACCTGGGATGATGGTGGATGAAGCGCT
GACCGGCGTACTCTCTGTATTTTGCTTGGACATGAGGTGCTGTATGGCAC
AACTGCTCCTCCGTGCATGGCGGGTGGGCATTGATTAGACCTGAGTGAAA
AAAGAACTCATATGCTTTGTTCTGATGGTCGACCCCACCGTAGGGTAAGG
CTCGCGAGGGTTAACTGACGGACTATTTAATTTTGTGATGGTGATGGTGA
CAACGAGAGTAGTGTAGCAGATCGATGGAGCATCTTACATCAAAGTAGCG
TTTGCACCGGTCCCACTGGTTGAAAGCTTACGGCAAAGATAGACGAACAT
TTACGTCATAATTCTAGCTTCGCTTACAGCCTTTTTCTGTCTGGCTACCA
TTCCTTACTTTTTCCATGTGTCGTCCTCGCTTGGTTGTCTTACCTATCAA
ACTTTTCCACGTCACGCCAATAATTTTTTCTCATATCCTCCGTCAAAAAC
TCTTTCCCCTCTGTACGCAAGACAAGAGCTCTACTCTTGGCTTTTTTGCC
AAACGGGCACCCCTGCTCATCTGTTCCCCCTCCTTCTTGCTGCTCGTGCG
CCTCTCTCGGAAAGGGTGCATTGGGCCATGTAATGTGGTTTCATCCCTGC
CACTTCTCCCACATCCCCGCACATCCCCGATTGTTCTTGACGTTTCACCA
TCGTTCTTTTATCCACCGGGCTCTTCTAGCATATAATGAATAGGCCCGTT
TTCGGTGTCGTCCGATGGTTTTGCATACTTTGTCGGCAACGGTGTCCAGT
CTTTTTTCTTTTATCCGACCTCCCTTCTGTTTCCTTTTTCTTGCGGCCCT
GTCAAATCATGGCTGAAAGTCGTTCTCCTGGCACTCTGCTTGCAGCACTT
GATTTGCTTTATCATCTTCCTCATATTTTGTCCTTGTTGTTGATACACGT
CTTGAGCCCAGTTGCCATGCGAGAAGCATCCCGCGAAACGTGAAACAAGA
CAAATCAAACCCGCTTCTCCACCGCGCACATGCATCCACACCAAAATTAC
TCAGTAACAGGCGTTCGTACGGTCGTTCGCCTTTATAGTCACGCCAGATT
TGGGTTTCCAATTATGTTGCATTGTGTATCAGGGTACTACATCTGGCAGC
GAGTTAAAAACAAAGTGGCAAGTATCCTTGTGTGGGAGGGGCCCTACCTC
TGCTGCAGCTGCTGCTAGATAAGTGATACGGTACACGGTAACAAGAATCG
ATGCGGTCAAGATCTCGTGACACGAAACACTTTGATTGAATGCCCGTTGC
TGCTTGTTTGCAAATTTCGTGGCCTTTACCGACAAAGCAGAAGAAGCAGC
GCAGGCACCCTTCCGCGCACTCTCACTCTCCCCTTCTGGTGCTTTGCATG
TTTCAAAGAAGAATCACGAAGGCGGATATCGACGTACCACATTACGCCCT
GTACTTCATGGAAGGCAACCGATGGCGTTTTTTCTTCTGCGCGAGTTTCA
AGATTTTGGATGGTCTATATTTTGTACTTCGTATAGAAGGAGATGACGTC
GTTAAACAGAATCTCAAAAATACTCCGTATGTTGGACTGCACCCTGGCCA
ACAGCTTACCCATGATGTGTTTTGTATATCTTTAATGATTTTCTATGTCT
CTCTCACTTTCTGTCTTTCTTGAACCCTCTCTCTCCAAACCTCGGCATAG
AACGGCGTCGCTCATGGCGGCGGTTTCTCCGGATGAAGAACCCGTGAGCG
AGGAGCACAGGCAAGATCGAGCCCAACGCGCGCTGCGTGTGGCTGTCGTC
GCCGGCTTCATTGGGAATTCCCAGCGCGTGCAAGAATCGTGTCTTGTTTT
GTGCAACGCGTGCCGTGAAGGCGTCCCGTTGGAGTGTCGCCTCGGCAAAG
GGGTCCCGGCCACCCTCCTTGCTATGTTTCTCCCGCACGCAAGTCAAGCG
CAGCTGCCAGAGGCCCCACCCACGAGAGTGTTGCAACCTCGCAGGGTGCG
GAAGGTGGAGTTTACTCAGATTGGTGACGTATTTTTCAGCATGGACTTCG
CGGGCGTGGACATGAGTAAAGTGCAATGGCCTGAAGGCACCAAAGAGATA
CGCCTGCTTCAGTTCGACCGAACGGTGGACGACGTGACGTGGCCAGTGAA
TTTAGATCGGCTTTCATTCTGCGTCCTCGACTACAAGACCAATTTCTGTA
CGGATGGGAGCTCCTTCAATCATCCGCTCAGTAACGTGATATTTCCCGGT
GGGCTTCGAGAGATTTTTCTCGGCGAGTTATTCGACCAGCCGATCGACGA
CGTTGCGTGGCCGCAGGGGCTCGAAAGAATGTCGCTGCCTGGCTTCAATC
AGCCCATTGATGATGTGCGGTGGCCACCGGCATTGAAATCTTTGGAATTC
ATGCCACCGAAAGAGATCCAACTCCGGAAAAACCCAAACATACGCGCAGC
CCAGCTGGACATTCATCATGAGCTTGGATACAATTGCCACTTTACCAACT
TACCGGCGAGCCTTGAGACTCTGTGGCTGTCGGATGCCTTTTCCCAGAAC
CTGGATGAGATCAACTGGCCGCCCGGGCTCGTAACCTTAGGGCTCGGTAT
CGGGTGTGAACCGCACGTTACAGATGACATTTCATGGCCCTCAAGTCTTC
GGCACATCTACTCTATGCACGAGATCGACGAAGCCCCGCAAGGCTGTGTG
GTTACCACAGTGACGGACTACGACACGGAGAGCCAGTCATACGAGATGGA
AATGGAAGATGCCTGGGTACACGGCGATGCGCCCGACGAAGGGTCGTGTA
GTGACGTGTACGAGGACGACGATTGCCCATTTACTGGATTCGCCGCCGAC
TCCGACTACGAGGGTTACGACAGTCCCATTATGTGAGGTGATTTTCTACG
AATTAAACGTATCTTGGTACGGTGGTGGATGTTGCGATGTAGGGTACCAC
CTCTTAGCGCTAGTAGGCTGTGGTGCTGAAGATGTTACAATGTAAGGGTA
CCATTTGGAGCTGAAAAGGCTGTGGGGTGGATGTGACAATGTAGGGTACC
ACCATTTAGCGCTAGTAGGCTGTGGCGCTGAGAATACGACGAAGTGTTTT
GGACAGAAGTGGTGTTAGCCCCATCGCTAAGTCGGCGGCGGGAGTGGAGA
CTTGAGAAATCGGCGTTTGCGGCGGTTCGTCGAGGTTTGTTATGAGATAC
GCTCTTTCGGTCACGTACTTGACACCACGGTTACCTCTCGTTTGAAATTT
GTTGTTTCCTCTTCCTCACTGTGTGCGTTCCTTGGGCGGGCGGGATTAGG
GTCTATTATTTGAGCCTCTCTTTCGACACGCCTAGGTCGGATGTTACTTT
TTTATTGTTGGTTGTCGAGGTTACAACAGTCGACTCGCAATTTCACTAGA
GCTCGGCAAAGGTTTCCTATTCGTCGTGAAACCACGACACGTAGTTCTCC
GTTCTTGGAAAATCGTATTGATACACGTAGCTCGAGGATGATGGTGGCGC
TTCCACCCGTTGAAGTGAAGCTTGTTCATGATATTGACCGACTAACAACT
AAATGGACGAATTATTGAGGCGGGTTGGGGGGAATTGTGATAACAAATGT
TGGAGACACAAACGGCGTTAAGGGCTGCTTCTTCTACCATGTGTATCAAG
CGGTACATTACTGAAGGCTTGTCCCTAGCTCAGGTTTCCTTGTAAGGATG
CCATGCGTGCACCCCATTAGCATGTGCAACGAAAGGGATGTCATATTAAT
AACAGCAATAATAGTGTGTGACGCTGTGACTATCTGGCTCGGCGGCTTGA
CAGCCATATGAAACTGCATGGGCATAATGGGTTGGGTGTCTTTGATAAGG
TTCGTCTCGAACCTTGCCAAGGGTTCAACGATTTGATCCCGCTGTGGTTT
GCCCAACAAAATTTTGACTTTGTTTGGGGAACACGCAAAACACAAGGAAT
ACATATATTCAGCATGTTACTTTTTCAGTGATCGTTAAACGTTTTTGCAG
GTGCGATGCAGTGGTTCTTCAGTGCTTGCTGGGCGTGTATCATGTTGTTC
TGTTCTTTCCATGTTTTGGTATTGCAGTTTTTCTTTTCGTTAATCTTGCC
GTTCAATGTCCTTTGCATTGTTGGAGATCGAGATCGAATTTGGAAAAAAG
ATCGCGGTATCGATCCTGATCCGGACGGAGTATCGGGAATTTTAATCGCG
ATGGCCTATACTCTTTTTAACCCCTTTGGGACTAGGCTGCTCACGCAGGT
GGCTAGTCGAGTAGTCTGTTGTTGTTTTTTTGGTCGGGCAAAAGGGTTCC
GTTTCGAGCAATCTCGCCGCGCATTGCCTCAAAAAAAAAAGTGAGCTCCT
GCAAATCGCCTCGAGAATTGCAGCAGCACAGCAGCCATGGCACGAGCTAA
AAATACGCAGGGGCCACGGCAAATGCCCGCGATAGGTTCAATGAGTTAGG
TTACATAGTAGAAGGATAGCCCGGCCGCTATTACGAGCCGACAGAGAGGT
AGCATGCTAGATCCCTGGTTCCGGTGTGTTTGCCCATGCTCTCTATTTCA
AGTATCATTCAATTACCCAGAAATAATGCCCGATTTTTCTCGGTTGAAGG
TTTTCCTGTA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig797:71149..84558+ >mRNA_P-littoralis_Contig797.31.1 ID=mRNA_P-littoralis_Contig797.31.1|Name=mRNA_P-littoralis_Contig797.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1173bp|location=Sequence derived from alignment at P-littoralis_Contig797:71149..84558+ (Pylaiella littoralis U1_48) ATGGCGGCGGTTTCTCCGGATGAAGAACCCGTGAGCGAGGAGCACAGGCA AGATCGAGCCCAACGCGCGCTGCGTGTGGCTGTCGTCGCCGGCTTCATTG GGAATTCCCAGCGCGTGCAAGAATCGTGTCTTGTTTTGTGCAACGCGTGC CGTGAAGGCGTCCCGTTGGAGTGTCGCCTCGGCAAAGGGGTCCCGGCCAC CCTCCTTGCTATGTTTCTCCCGCACGCAAGTCAAGCGCAGCTGCCAGAGG CCCCACCCACGAGAGTGTTGCAACCTCGCAGGGTGCGGAAGGTGGAGTTT ACTCAGATTGGTGACGTATTTTTCAGCATGGACTTCGCGGGCGTGGACAT GAGTAAAGTGCAATGGCCTGAAGGCACCAAAGAGATACGCCTGCTTCAGT TCGACCGAACGGTGGACGACGTGACGTGGCCAGTGAATTTAGATCGGCTT TCATTCTGCGTCCTCGACTACAAGACCAATTTCTGTACGGATGGGAGCTC CTTCAATCATCCGCTCAGTAACGTGATATTTCCCGGTGGGCTTCGAGAGA TTTTTCTCGGCGAGTTATTCGACCAGCCGATCGACGACGTTGCGTGGCCG CAGGGGCTCGAAAGAATGTCGCTGCCTGGCTTCAATCAGCCCATTGATGA TGTGCGGTGGCCACCGGCATTGAAATCTTTGGAATTCATGCCACCGAAAG AGATCCAACTCCGGAAAAACCCAAACATACGCGCAGCCCAGCTGGACATT CATCATGAGCTTGGATACAATTGCCACTTTACCAACTTACCGGCGAGCCT TGAGACTCTGTGGCTGTCGGATGCCTTTTCCCAGAACCTGGATGAGATCA ACTGGCCGCCCGGGCTCGTAACCTTAGGGCTCGGTATCGGGTGTGAACCG CACGTTACAGATGACATTTCATGGCCCTCAAGTCTTCGGCACATCTACTC TATGCACGAGATCGACGAAGCCCCGCAAGGCTGTGTGGTTACCACAGTGA CGGACTACGACACGGAGAGCCAGTCATACGAGATGGAAATGGAAGATGCC TGGGTACACGGCGATGCGCCCGACGAAGGGTCGTGTAGTGACGTGTACGA GGACGACGATTGCCCATTTACTGGATTCGCCGCCGACTCCGACTACGAGG GTTACGACAGTCCCATTATGTGA back to top
|