prot_P-littoralis_Contig797.28.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig797.28.1
Unique Nameprot_P-littoralis_Contig797.28.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length135
Homology
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BLAST of mRNA_P-littoralis_Contig797.28.1 vs. uniprot
Match: A0A6H5KM55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM55_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.530e-11
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   79 PAGMYRPQGNEPPIHGADPRQRCISCGEFGHIHQFCPARTKIHPP 123
            P  MYRPQGNEPPIH  DPR+RC  CGE GH H FCP+R  +  P
Sbjct:  319 PPHMYRPQGNEPPIHPNDPRKRCEDCGELGHNHLFCPSRVDVGRP 363
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BLAST of mRNA_P-littoralis_Contig797.28.1 vs. uniprot
Match: A0A6H5JNY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY3_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.610e-10
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:   82 MYRPQGNEPPIHGADPRQRCISCGEFGHIHQFCPARTKIHPP 123
            MYRPQGNEPPIH  DPR+RC +CGE GH + F P+R  +  P
Sbjct:    1 MYRPQGNEPPIHPNDPRKRCENCGELGHNYLFLPSRVDVGRP 42
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig797.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KM55_9PHAE1.530e-1164.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNY3_9PHAE2.610e-1061.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..63
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 100..115
score: 8.663751
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 93..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig797contigP-littoralis_Contig797:63614..64018 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig797.28.1mRNA_P-littoralis_Contig797.28.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig797 63613..64018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig797.28.1 ID=prot_P-littoralis_Contig797.28.1|Name=mRNA_P-littoralis_Contig797.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=135bp
QERAARGLRTAATWISPTASVGWGRKGARVLQQQHNNGGGGHQVPERYGA
GSSGPRWADAKTLPAYQAPDGGYNYDRYPAGMYRPQGNEPPIHGADPRQR
CISCGEFGHIHQFCPARTKIHPPDPGIVRQPTSNT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf