mRNA_P-littoralis_Contig796.40.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: A0A6H5JIR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR5_9PHAE) HSP 1 Score: 126 bits (317), Expect = 6.070e-33 Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 ELYNFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFVEVV 264
ELYNF VEERK A AIK+ YPS +YLI++ R +VLYY+ GW+ASR WTHQRR NLSPDW R+V HNTYQSS+ A A +P++ F EVV
Sbjct: 234 ELYNFLVEERKRANAIKVLYPSTQYLISQSRGQVLYYVCGWMASRAWTHQRRRNLSPDWYRIVEHNTYQSSEMAKARDPMIGQFAEVV 321
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: A0A6H5KGF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF3_9PHAE) HSP 1 Score: 107 bits (267), Expect = 4.650e-28 Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 1
Query: 16 FVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDF 252
+ +ERK+++A++L YPS+++ I KP +VLYYIAGW AS+ WTH RRHNLS DWVRVV+HNT +S EAI + +LRDF
Sbjct: 50 YAKERKDSVAVELSYPSERHQITKPCGQVLYYIAGWAASKAWTHHRRHNLSQDWVRVVQHNTRRSRGEAICTDSMLRDF 128
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: A0A6H5JQL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQL1_9PHAE) HSP 1 Score: 109 bits (273), Expect = 5.750e-28 Identity = 52/83 (62.65%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 1 ELYNFF-VEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLR 246
ELYN V+ERK+++A++L YPS++Y I K R +VLYYIAGW AS+ WTH+RRHNLS DWVRVV+HNT +SS EAI + +LR
Sbjct: 133 ELYNKVNVKERKDSVAVELSYPSERYQITKSRGQVLYYIAGWAASKAWTHKRRHNLSQDWVRVVQHNTRRSSGEAICTDSMLR 215
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: A0A6H5JX42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX42_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.380e-26 Identity = 49/85 (57.65%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 1 ELYNFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFV 255
ELY +V+ERK+++A++L YPS++Y I++PR +VL+ IAGW S+ THQ RHNLS DWVRVV+HNT +SS+EA+ +LRDFV
Sbjct: 13 ELYKVYVKERKDSVAVELSYPSERYQISRPRGQVLHDIAGWATSKALTHQARHNLSQDWVRVVQHNTRRSSREAMFTNVMLRDFV 97
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 4.230e-20 Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 1
Query: 61 PSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFV 255
PS++Y I++PR +VLYYIAGW AS+ THQ RHNLS DWVRVV+HNT +SS+EAI +LRDFV
Sbjct: 172 PSERYQISRPRGQVLYYIAGWAASKALTHQARHNLSQDWVRVVQHNTRRSSREAIFTNVMLRDFV 236
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: A0A6H5KKY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 8.850e-17 Identity = 33/56 (58.93%), Postives = 46/56 (82.14%), Query Frame = 1
Query: 1 ELYNFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLS 168
ELY +V++RK+++A++L YPS +Y I +PR +VLYY+AGW AS+ WTHQR HNLS
Sbjct: 3 ELYKVYVKKRKDSVAVELSYPSVRYQITQPRGQVLYYVAGWAASKAWTHQRSHNLS 58
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: D7FVM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM7_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 4.280e-15 Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = 1
Query: 1 ELYNFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSP-DWVRVVRHNTYQSSQEAIAHEPVLRDFV 255
ELY FV ++K A IKL YP +K + KPRA+VLYYI+GWL S+VWTH RR + +WV V N S+ A+ + L V
Sbjct: 170 ELYGVFVRKKKEANLIKLSYPDKKTRVTKPRAKVLYYISGWLLSKVWTHVRRQKIEEREWVSFVDLNKSASAGAAVEKDKELEHLV 255
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: D7G5R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R0_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 2.440e-13 Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 1 ELYNFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSP-DWVRVVRHNTYQSSQEAIAHEPVLRDFV 255
ELY FV ++K A IKL YP K + KPRA+VLYYI+GWL S+ W H RR + +WV V N S A+ + L V
Sbjct: 112 ELYGVFVRKKKEANLIKLSYPDNKTRVTKPRAKVLYYISGWLLSKDWAHVRRQKIEEREWVSFVDLNKSASEGAAVEKDKELEHLV 197
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: A0A6H5K3B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B5_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 5.240e-9 Identity = 24/40 (60.00%), Postives = 35/40 (87.50%), Query Frame = 1
Query: 1 ELYNFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAG 120
ELY +V+ERKN++A++L YPS++Y I++PR +VLYYIAG
Sbjct: 3 ELYEVYVKERKNSVAVELSYPSERYQISRPRGQVLYYIAG 42
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Match: A0A6H5K7M3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M3_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 3.320e-8 Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 31 KNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSP-DWVRVVRHNTYQSSQEAIAHEPVLRDFVEVV 264
++A I YP + ++ PR R+LYYIAGW+ S++ TH RRHN+ +W+ +V + Y S + A +E LR E V
Sbjct: 136 RDANVITPTYPRTQVALSIPRRRLLYYIAGWVLSKIVTHVRRHNIQEIEWMWIVDRHKYPSKRAAEENEMELRGVTEEV 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig796.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig796.40.1 >prot_P-littoralis_Contig796.40.1 ID=prot_P-littoralis_Contig796.40.1|Name=mRNA_P-littoralis_Contig796.40.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=88bp ELYNFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQback to top mRNA from alignment at P-littoralis_Contig796:121720..121984+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig796.40.1 ID=mRNA_P-littoralis_Contig796.40.1|Name=mRNA_P-littoralis_Contig796.40.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=265bp|location=Sequence derived from alignment at P-littoralis_Contig796:121720..121984+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig796:121720..121984+ >mRNA_P-littoralis_Contig796.40.1 ID=mRNA_P-littoralis_Contig796.40.1|Name=mRNA_P-littoralis_Contig796.40.1|organism=Pylaiella littoralis U1_48|type=CDS|length=264bp|location=Sequence derived from alignment at P-littoralis_Contig796:121720..121984+ (Pylaiella littoralis U1_48)back to top |