prot_P-littoralis_Contig796.7.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig796.7.3
Unique Nameprot_P-littoralis_Contig796.7.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length575
Homology
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: A0A6H5KWU3_9PHAE (RNB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU3_9PHAE)

HSP 1 Score: 520 bits (1340), Expect = 1.060e-177
Identity = 302/450 (67.11%), Postives = 338/450 (75.11%), Query Frame = 0
Query:  133 QFP------RASRTARSSLLAAGTATAITTMSAAADQIGPGSIVVFESDIKGRPPALGLVTGSGAGKKKTTYSVQPAASTLVGXXXNPASTTVASRQVRYVVPGGSRYQAEDLSVFEEKQEEVDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRLGGDERRSICR--KRAVPMFPAEVAHGVLSLR 574
            QFP      RA+RT RS+        A TTMSAA DQIGPGS+VVF+SD++GRPPALGLVT S  GKKK TY+VQP    +     +   TTVA+RQVRYVVPGGS YQA+DL+ FE+  E +D GLIEE WDMMLEESTA +        D         +DDPRGMAELLFGV +P+PQQCY AFRLLEGRDGTL+FKRRRDGTYECRSREAV +AR +L+ EDA KAKKA+F+A LQAGL+EGGGYRKTPLVV DFDEEQQEML GLEILA QSVARTNFAS T+AEEALGRELLT LGR+P+ +NAFHLCV LGLMKHHENLY REAGIDKTFS++AM QARAM+ESPP DPEAS+RRDLTHLKVYAIDSEDTNEVDDGLSVE  P G                 EG+P          RR+     + A PMFPAEVAHGVLSLR
Sbjct:   79 QFPTEHQRHRATRTDRSA--------AATTMSAA-DQIGPGSVVVFDSDVRGRPPALGLVTESSVGKKKLTYTVQP----VEAASGSSTKTTVAARQVRYVVPGGSGYQAKDLAAFEDSPE-IDEGLIEEAWDMMLEESTAGS--------DXXXXXXXXXNDDPRGMAELLFGVGDPSPQQCYHAFRLLEGRDGTLYFKRRRDGTYECRSREAVEVARRQLSQEDAVKAKKADFVASLQAGLNEGGGYRKTPLVVGDFDEEQQEMLSGLEILAAQSVARTNFASRTTAEEALGRELLTLLGRSPNPSNAFHLCVQLGLMKHHENLYMREAGIDKTFSEKAMTQARAMMESPPPDPEASIRRDLTHLKVYAIDSEDTNEVDDGLSVEALPDGAGERVWVHIADVSRWVPEGSPLYEEAR---RRRTTIYLPEGAEPMFPAEVAHGVLSLR 503          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: D8LLK7_ECTSI (COG0557: Exoribonuclease R n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK7_ECTSI)

HSP 1 Score: 517 bits (1331), Expect = 6.160e-172
Identity = 288/419 (68.74%), Postives = 322/419 (76.85%), Query Frame = 0
Query:  160 AADQIGPGSIVVFESDIKGRPPALGLVTGSGAGKKKTTYSVQPAASTLVGXXXNPASTTVASRQVRYVVPGGSRYQAEDLSVFEEKQEEVDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRLGGDERRS----ICRKRAVPMFPAEVAHGVLSLR 574
            AADQIGPGS+VVF+SD++GRPPALGLVT S  GKKK TY+VQP    +     +   TTVA+RQVRY+VPGGS YQA DL+ FE+  E +D GLIEE WDMMLEESTA +                  +DDPRGMAELLFGV +P+PQQCY AFRLLEGRDGTL+FKRRRDGTYECRSREAV +AR +L+ EDA KAKKA+F+A LQAGL+EGGGYRKTPLVVEDFDEEQQEML GLEILA QSVARTNFAS T+AEEALGRELLT LGR+P+ +NAFHLCV LGLMKHHENLY REAGIDKTFS+EAM QARAM++SPP DPEAS+RRDLTHLKVYAIDSEDTNEVDDGLSVE  P G                 EG+P     L  + RR        + A PMFPAEVAHGVLSLR
Sbjct:    3 AADQIGPGSVVVFDSDVRGRPPALGLVTESSVGKKKLTYTVQP----VEAASGSSTKTTVAARQVRYIVPGGSGYQAADLAAFEDSPE-IDEGLIEEAWDMMLEESTAGSDXXXXX------XXXXXXNDDPRGMAELLFGVGDPSPQQCYHAFRLLEGRDGTLYFKRRRDGTYECRSREAVEVARRQLSQEDAVKAKKADFVASLQAGLNEGGGYRKTPLVVEDFDEEQQEMLSGLEILAAQSVARTNFASRTTAEEALGRELLTLLGRSPNPSNAFHLCVQLGLMKHHENLYMREAGIDKTFSEEAMAQARAMMKSPPPDPEASIRRDLTHLKVYAIDSEDTNEVDDGLSVEALPDGAGERVWVHIADVSRWVPEGSP-----LYEEARRKRTTIYLPEGAEPMFPAEVAHGVLSLR 405          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: K9RQP0_SYNP3 (Exoribonuclease R n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RQP0_SYNP3)

HSP 1 Score: 143 bits (360), Expect = 1.660e-32
Identity = 126/371 (33.96%), Postives = 175/371 (47.17%), Query Frame = 0
Query:  213 NPASTTVASRQVRYVVPGGSRYQAEDLSVFEEKQEE-VDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRLGGDERRSICRKRA---------VPMFPAEVAHGVLSL 573
            N  + T+  RQ+ Y V G  RYQ +++  F++  E  +D   +E  W+++LEE+ A +                     P  +A LLF  +  TP QCY A  LL   +  ++FK++ +  YE R    V   +H+L  E   +  KA+F+A L   L +       P     F  E  E    L  LA QS  + N AS          ELLT L R  ++  AF L V L L KHHENL    + I   F  E +D AR  + +PP D +A +R+DLTHLKVY ID E T E+DDG+S+E  P G+E          R      +P+    LG D      R+RA         +PMFP E+A G +SL
Sbjct:   35 NHQAHTLHPRQITYTVTG-ERYQTQEIPQFQKAVEPFLDPESLEVAWEILLEENRAVS---------------------PESLALLLFSGQ--TPLQCYAAHYLLS--EDKIYFKQKAE-LYEARPTSQVAEIKHQLEKERQRQQTKAQFLAKLNQALAQET-ISWEPAERNKF--EPLERFAALGDLATQS--QINAAS----------ELLTQLKRPTTALAAFQLLVDLSLWKHHENLALHRSQIPTAFKPEVVDMARHCISNPPPDLDAPIRQDLTHLKVYTIDDESTQEIDDGISLETLPNGQE----------RLWIHIADPSRWLLLG-DGLEQEARRRATTVYLPTGMIPMFPPELATGPMSL 352          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: A0A0G4EU84_VITBC (RNB domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EU84_VITBC)

HSP 1 Score: 134 bits (336), Expect = 3.350e-29
Identity = 135/432 (31.25%), Postives = 194/432 (44.91%), Query Frame = 0
Query:  162 DQIGPGSIVVFESDIKGRPPALGLVTGSGAGKKKTTYSVQPAASTLVGXXXNPASTTVASRQVRYVVPGGSRYQAED-----LSVFEEKQE----EVDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTL---EDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRLGGDERRSICRKRAV--------PMFPAEVAHGVLSL 573
            D +G G++V +E    G    LG+V  +  GKK  ++ V  A   L G      + +V  + +RYVVPG S   A D     L+ F E+      + D   +E  W+M+ EE                  G S T  D    A L+   +  T +  Y AF  L    G +FF+  RDG +E R    V +AR        E     + A+++AD  AG   G      P     FD   ++  RGL    V    R +  + T+  +  G ELL+ LGR  ++A AF + V LG+   HENL      + + FS   +D A ++V  PPADP+A++RRDLTHL+VY ID   T EVDDG+S+E    GR+          R      + +  T  GG       R+++         PMFP  VA  ++SL
Sbjct:   92 DDVGVGAVVDYERG--GGEGMLGVVAATD-GKK--SWKVVDA---LTGR-----TLSVPHKHIRYVVPGISMGAASDGRLNELAAFMERARSRGCDADLPTVELAWEMLREE------------------GDSFTVSD---FARLVHD-DASTAEAAYGAFLTLHSDMGKVFFRPTRDGHFEARDPSVVDVAREAFARRQHEQQEARQFAQWVADKLAG---GERIDFDPDATSPFDAVDRDAWRGL----VGVACRLDDKTYTTQHDKQGEELLSLLGRPSTAAEAFDVLVRLGVFHKHENLMKHRLQLGEPFSRSVLDAAASLVADPPADPDAAIRRDLTHLRVYTIDEPSTVEVDDGISIEPTDDGRD----------RLWIHIADVSRWTHRGGVLDAEAARRQSTLYLPEATYPMFPMSVAATLMSL 471          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: A0A355DP83_9CYAN (RNB domain-containing ribonuclease n=1 Tax=Cyanobacteria bacterium UBA11162 TaxID=2055781 RepID=A0A355DP83_9CYAN)

HSP 1 Score: 131 bits (329), Expect = 1.640e-28
Identity = 117/368 (31.79%), Postives = 172/368 (46.74%), Query Frame = 0
Query:  218 TVASRQVRYVVPGGSRYQAEDLSVFEEKQEE-VDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATR--LGGDERRSICRKRA---------VPMFPAEVAHGVLSL 573
            T+ ++QV Y V  G  Y+  D+  F ++ +  +D   +E  W+ ++EE  A                      DP  MA LLF   E +P QCY A+ LL   +  L+FK++ D  YE RS   V   +H+L +    + ++ EF A ++  L   GG++       ++ +  +  L  LE  A+Q    T  A+          E L AL R  +   A  L V LG+   HENL+ R + I   FS + ++ A+   E  P DP++  R DLT LKVY ID E T E+DDGLS E+ P G++         W       + A  TR    GDE     R+R+         +PMFPAE+A G +SL
Sbjct:   40 TINAKQVSYEV-NGETYKPSDIPRFRKQVDPFIDPESLEVAWEFLVEEGLAV---------------------DPAEMAMLLF--SEKSPAQCYAAYYLLT--EDKLYFKQKGD-RYEPRSTNQVAEIKHQLEVARERENQQKEFWARVEQAL---GGFQV------EWQQSDRHRLEALERFAIQGDEATGRAAAV--------ETLAALKRPENPQGAIDLLVDLGVWSRHENLFLRRSSIQVNFSTKVLEVAKERTEVAPPDPDSE-RLDLTRLKVYTIDDESTKEIDDGLSWELLPDGKQR-------LWV------HIADPTRWLTPGDELDLDARRRSTTLYLPTGMIPMFPAELATGPMSL 349          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: A0A0M1JQR4_9CYAN (Ribonuclease n=2 Tax=Planktothricoides TaxID=132607 RepID=A0A0M1JQR4_9CYAN)

HSP 1 Score: 130 bits (328), Expect = 2.150e-28
Identity = 117/370 (31.62%), Postives = 169/370 (45.68%), Query Frame = 0
Query:  216 STTVASRQVRYVVPGGSRYQAEDLSVFEEKQEE-VDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRL--GGDERRSICRKRA---------VPMFPAEVAHGVLSL 573
            S ++  +QV Y +     Y+  DL+ F ++ E  +D   +E  W++++E+S A +                     P  MA LLF   + TP QCY A+ LL      LFFK++ D  YE R    V   +H+  +E+  +    EF++ +   L         P+   + D  + E +    +   ++  R N            +E+L  L R  +   AF L V LGL   HENL+ R   I   FS + ++ A   + SPPADP+ + R DLT +KVY ID E T E+DDGLSVE    GRE         W       + A  TRL   GDE     R+R+         VPMFPAE+A G +SL
Sbjct:   38 SQSIRPQQVSYEIAKDG-YKPSDLANFRKEVEPLIDPDSVEVAWEILVEDSEAVS---------------------PAEMALLLF--SDQTPAQCYAAYSLLS--QDKLFFKQKGD-RYEPRPASQVAELKHQKEVEETRQRDWTEFLSRVSQSL------AGEPVEWSNSDRIRIEAIEKYAVFGEEAKERMN-----------AKEILAVLQRPETPEGAFDLLVDLGLWTEHENLFLRRTQIPINFSTKVLEVAHRCLISPPADPDENNRLDLTQMKVYTIDDESTQEIDDGLSVEYLEDGRER-------LWV------HIADPTRLMSPGDELDLEARRRSTTVYLPTGMVPMFPAELATGPMSL 350          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: A0A6H1TW57_9CYAN (VacB/RNase II family 3'-5' exoribonuclease n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TW57_9CYAN)

HSP 1 Score: 129 bits (325), Expect = 5.290e-28
Identity = 118/370 (31.89%), Postives = 170/370 (45.95%), Query Frame = 0
Query:  216 STTVASRQVRYVVPGGSRYQAEDLSVFEEKQEE-VDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATR--LGGDERRSICRKRA---------VPMFPAEVAHGVLSL 573
            S ++  RQ+ Y V G  +Y+  D+  F +  E  +D   +E  W++++EE              G GV       +P  +A+ LF   E TP  CY A+ LL   +  L+FK++ D  YE R    V   +H+  +E   + +  EF+A ++  L             E  +    + +R      ++++ R       + + A  +E L+AL R  SS  AF L V LGL   HENL+ R   +   FS + ++ A   + SPP DP+A  R DLTHLKVY ID E T E+DDGLSVE    GR          W       + A  TR    GDE     R+R          VPMFP E+A G +SL
Sbjct:   38 SQSLPPRQISYEVTG-EQYKPTDIPRFRQDAEPYIDPSSLEVAWEILVEE--------------GQGV-------NPPELAQFLF--SEQTPVACYAAYLLLS--EDKLYFKQKGD-RYEPRPVSQVNDLKHQQEVERQKQQEWEEFVARVERSL-----------AGEQAEWSNSDRIR------IEALERYAAQGEDAKDRATAKETLSALERPDSSQGAFDLLVDLGLWSEHENLFVRRTQLPTYFSTKVLEVAHRCLTSPPPDPDADNRLDLTHLKVYTIDDESTEEIDDGLSVESLEDGRRR-------LWV------HIADPTRWLTPGDELDLEARRRCTTVYLPTGMVPMFPPELATGPMSL 350          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: Q10Y88_TRIEI (Exoribonuclease II n=4 Tax=Oscillatoriales TaxID=1150 RepID=Q10Y88_TRIEI)

HSP 1 Score: 128 bits (322), Expect = 1.280e-27
Identity = 121/373 (32.44%), Postives = 174/373 (46.65%), Query Frame = 0
Query:  213 NPASTTVASRQVRYVVPGGSRYQAEDLSVF-EEKQEEVDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRL--GGDERRSICRKRA---------VPMFPAEVAHGVLSL 573
            N  S ++  +Q+ Y V GG  YQ+ ++  F +E +  +D   +E  W++++EE+ A                      +P  MA LLF   E TP QCY A+ LL   D  L+FK++ D  YE RS   V   +H+  ++   K +   F+  +              L  E  + EQ +  R    L +     T+   T+   +A+  E L  L    +S  AF L V LG+   HENLY R + I K FS + ++ A++ ++S P DPE + R DLTHLKVY ID E T E+DDGLS+E    G+          W       + A  TRL   GDE     R+R          VPMFP E+A G +SL
Sbjct:   35 NGKSNSIPPKQISYEV-GGESYQSSEIPQFIQEVKTYLDPSSLEVAWELLVEEAEAV---------------------NPEEMALLLF--SEQTPIQCYAAYILLS--DDKLYFKQKGD-RYEPRSVAQVAEIKHQQEVQKQRKEELENFLLRVH-----------NRLAGEKVEWEQSDYNR----LDIIEKFATHGEETSHRSQAM--ETLATLKVPETSEAAFKLLVDLGIWSEHENLYLRRSQIPKCFSTKVLEVAKSCLQSLPPDPETN-RLDLTHLKVYTIDDESTQEIDDGLSIEFLEDGQHR-------IWV------HIADPTRLLIPGDELDLEARRRTTTLYLPTGMVPMFPPELATGPMSL 349          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: A0A2W7B9B0_9CYAN (RNB domain-containing ribonuclease n=1 Tax=Snowella sp. TaxID=2164131 RepID=A0A2W7B9B0_9CYAN)

HSP 1 Score: 127 bits (320), Expect = 2.220e-27
Identity = 119/370 (32.16%), Postives = 174/370 (47.03%), Query Frame = 0
Query:  216 STTVASRQVRYVVPGGSRYQAEDLSVFEEK-QEEVDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRL--GGDERRSICRKRA---------VPMFPAEVAHGVLSL 573
            S  +  ++V Y + GG  YQ +D++ F EK Q  +D   +E  W++++E++ A                       P  MA+LLF   E +P  CY A  LL   +  +FFK + D  YE RS   V   +H++ +E   + +K  F+A L   +            VE  D ++         L ++S+ R       ++  A  ++LL  + R P+  +AF L V LGL K+HENL+ R +     F  + +D  ++ + SPP D +   R DLTHLKVY ID E T E+DDGLSVEI P GRE         W       + A  TRL    DE     RKR+         + MFP E+A G +SL
Sbjct:   38 SHKIRLQRVEYEIDGGP-YQPKDIAPFLEKVQPYLDPSSLEVAWEILVEDNAAVT---------------------PIEMAQLLF--SEKSPVLCYAAHSLLA--EDKIFFKNKGDN-YEPRSLNQVQEIQHQIAVEKQRQNEKEGFLARLHQAI--------AGETVEWTDSDR---------LRLESLERYVLQPELNSRNA--QDLLNLVDRPPTPESAFELLVKLGLWKYHENLFLRRSAYPLKFPQKVLDVFQSYLHSPPPDLDRD-RLDLTHLKVYTIDDESTQEIDDGLSVEILPDGRER-------LWI------HIADPTRLMIPNDELDLEARKRSTTIYLPTGMISMFPPELATGPMSL 347          
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Match: A0A3M1L7S2_9CYAN (RNB domain-containing ribonuclease n=1 Tax=Cyanobacteria bacterium J083 TaxID=2420336 RepID=A0A3M1L7S2_9CYAN)

HSP 1 Score: 127 bits (320), Expect = 2.300e-27
Identity = 111/368 (30.16%), Postives = 169/368 (45.92%), Query Frame = 0
Query:  222 RQVRYVVPGGSRYQAEDLSVFEEKQEE-VDGGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFGVEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTLEDAAKAKKAEFIADLQAGLD----EGGGYRKTPLVVEDFDEEQQEMLRGLEILAVQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHENLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDSEDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRL--GGDERRSICRKRA---------VPMFPAEVAHGVLSL 573
            ++V Y V GGS YQ  D+  F  + E  +D   +   W++++E+  +                       P  MAELLF   + +P  CY A++LL   +  ++FK++ D  YE RS   V   +H+L ++   K +KAEF+  LQA L     E   Y ++                      ++S+ +       +   AL  ++L ++GR P+   AF L V +G    HENL+ R +     F  + ++   + +++PPADP+   R DLT LKVY ID E T E+DDGLS+E        G G     W       + A  TRL   GD      R+R+         +PMFPAE+A G +SL
Sbjct:   44 QRVEYQVTGGS-YQPADIPDFINQVEPYLDPSSLAVAWEILVEDKQSVT---------------------PAAMAELLF--SQQSPPLCYAAYKLLS--EDKIYFKKKGD-VYEPRSPSQVEEIKHQLEIQAQKKKEKAEFLLHLQAALQGDKVEWSAYERS---------------------GIESLEKFVLQPELNHRHAL--DILASIGREPNPQAAFELLVEIGWWTKHENLFLRRSSYPVNFPPKVLNVVDSYLQTPPADPDEDNRLDLTRLKVYTIDDESTEEIDDGLSIEYL------GEGKKIKIWI------HIADPTRLISPGDSLDLEARRRSTTMYLPTGMIPMFPAELATGPMSL 349          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig796.7.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWU3_9PHAE1.060e-17767.11RNB domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLK7_ECTSI6.160e-17268.74COG0557: Exoribonuclease R n=1 Tax=Ectocarpus sili... [more]
K9RQP0_SYNP31.660e-3233.96Exoribonuclease R n=1 Tax=Synechococcus sp. (strai... [more]
A0A0G4EU84_VITBC3.350e-2931.25RNB domain-containing protein n=2 Tax=Vitrella bra... [more]
A0A355DP83_9CYAN1.640e-2831.79RNB domain-containing ribonuclease n=1 Tax=Cyanoba... [more]
A0A0M1JQR4_9CYAN2.150e-2831.62Ribonuclease n=2 Tax=Planktothricoides TaxID=13260... [more]
A0A6H1TW57_9CYAN5.290e-2831.89VacB/RNase II family 3'-5' exoribonuclease n=4 Tax... [more]
Q10Y88_TRIEI1.280e-2732.44Exoribonuclease II n=4 Tax=Oscillatoriales TaxID=1... [more]
A0A2W7B9B0_9CYAN2.220e-2732.16RNB domain-containing ribonuclease n=1 Tax=Snowell... [more]
A0A3M1L7S2_9CYAN2.300e-2730.16RNB domain-containing ribonuclease n=1 Tax=Cyanoba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..127
NoneNo IPR availablePANTHERPTHR23355:SF42EXORIBONUCLEASE II, MITOCHONDRIALcoord: 269..518
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 269..518
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 442..518

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig796contigP-littoralis_Contig796:26112..34188 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig796.7.3mRNA_P-littoralis_Contig796.7.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig796 11827..34210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig796.7.3 ID=prot_P-littoralis_Contig796.7.3|Name=mRNA_P-littoralis_Contig796.7.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=575bp
MHQSADDTGRRIADCSSLFSCLTSGISMVLAFASAPAVVSALVAFAGNGV
HVSNAFMILSGTGRQAGSRLVGGNQHGSSHTGNPITARAHLFACSWAPSQ
QLLQQKQEQQQQQHQHHRQSALSSRLHLQRGLQFPRASRTARSSLLAAGT
ATAITTMSAAADQIGPGSIVVFESDIKGRPPALGLVTGSGAGKKKTTYSV
QPAASTLVGGGGNPASTTVASRQVRYVVPGGSRYQAEDLSVFEEKQEEVD
GGLIEEVWDMMLEESTAAATAGLDGSGDGGGVGSSSTSDDPRGMAELLFG
VEEPTPQQCYQAFRLLEGRDGTLFFKRRRDGTYECRSREAVGLARHKLTL
EDAAKAKKAEFIADLQAGLDEGGGYRKTPLVVEDFDEEQQEMLRGLEILA
VQSVARTNFASTTSAEEALGRELLTALGRAPSSANAFHLCVHLGLMKHHE
NLYAREAGIDKTFSDEAMDQARAMVESPPADPEASLRRDLTHLKVYAIDS
EDTNEVDDGLSVEICPTGREPGSGSTSPTWRTGGAEGNPATATRLGGDER
RSICRKRAVPMFPAEVAHGVLSLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold