mRNA_P-littoralis_Contig792.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE) HSP 1 Score: 110 bits (275), Expect = 4.310e-28 Identity = 50/59 (84.75%), Postives = 52/59 (88.14%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKV 177
VLGVLQVLGRGNCFADV+Q SLMS AEKSFHRFCDCFSS LWHQWV LPEG+ LKKV
Sbjct: 101 VLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKV 159
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 110 bits (275), Expect = 2.730e-27 Identity = 50/59 (84.75%), Postives = 52/59 (88.14%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKV 177
VLGVLQVLGRGNCFADV+Q SLMS AEKSFHRFCDCFSS LWHQWV LPEG+ LKKV
Sbjct: 113 VLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKV 171
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 102 bits (255), Expect = 1.380e-25 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVE 180
VLGVLQ LGRGNCFADV+ FSLMS + AE+SFHRFC CF++ LW W+RLPEG+DL++VE
Sbjct: 6 VLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVE 65
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 101 bits (252), Expect = 9.230e-24 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVE 180
VLGVLQVLGRGNCFADV+ FSLMS + AE+SFHRFC CF++ LW W+RLPEG+ L++VE
Sbjct: 211 VLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVE 270
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5KJD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD5_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 1.410e-19 Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVE 180
VLG L+VL G CF DV+ FSLMS + AE SFH FC+ FS LW WV+LP GD+LKKVE
Sbjct: 59 VLGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCENFSEGLWDTWVKLPRGDELKKVE 118
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5KGV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV3_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 7.530e-18 Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVE 180
V+G L+VL G CF DV+ FSLMS + AE SFH FC+ FS LW WV+LP GD+ KKVE
Sbjct: 138 VMGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKKVE 197
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 5.570e-11 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKV 177
VL LQ+L RGN FAD+ S +S +FHRFC F++ L+ ++V LP G+DL+KV
Sbjct: 84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKV 142
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 5.740e-11 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKV 177
VL LQ+L RGN FAD+ S +S +FHRFC F++ L+ ++V LP G+DL+KV
Sbjct: 175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKV 233
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 7.440e-11 Identity = 24/38 (63.16%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 67 MSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVE 180
MS + AE+SFHRFC CF++ LW W+RLPEG+DL++VE
Sbjct: 1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVE 38
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Match: A0A6H5KTA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA5_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 4.400e-10 Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 1 VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEG 159
VL LQ+LGRGNCF D+ Q SLMS A +FH+FC F+ L+ + + LP G
Sbjct: 4 VLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTG 56 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig792.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig792.2.1 >prot_P-littoralis_Contig792.2.1 ID=prot_P-littoralis_Contig792.2.1|Name=mRNA_P-littoralis_Contig792.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=60bp VLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLback to top mRNA from alignment at P-littoralis_Contig792:8258..8437+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig792.2.1 ID=mRNA_P-littoralis_Contig792.2.1|Name=mRNA_P-littoralis_Contig792.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=180bp|location=Sequence derived from alignment at P-littoralis_Contig792:8258..8437+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig792:8258..8437+ >mRNA_P-littoralis_Contig792.2.1 ID=mRNA_P-littoralis_Contig792.2.1|Name=mRNA_P-littoralis_Contig792.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=180bp|location=Sequence derived from alignment at P-littoralis_Contig792:8258..8437+ (Pylaiella littoralis U1_48)back to top |