prot_P-littoralis_Contig792.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig792.8.1
Unique Nameprot_P-littoralis_Contig792.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length278
Homology
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BLAST of mRNA_P-littoralis_Contig792.8.1 vs. uniprot
Match: Q8QNM9_ESV1K (EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM9_ESV1K)

HSP 1 Score: 63.5 bits (153), Expect = 1.090e-7
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 0 
Query:    2 ANIGIADFVGDVVDIGKKIPEAIENLEEMIINLLNGMKGKLFDVVNGAVSGTVNGVNKSVNTLPDGLEN 70
            ANI I DFVGDVVD+ +KIPEA++NL+ +++ L+N +K     VVN  +  ++ GV  SVN L   L++
Sbjct:  201 ANIPIGDFVGDVVDVFQKIPEAMDNLKGLLVMLINKIKNDTIGVVNTGIRESIQGVETSVNFLSGKLDD 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig792.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNM9_ESV1K1.090e-746.38EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.20Apolipoproteincoord: 11..142
e-value: 7.9E-6
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig792contigP-littoralis_Contig792:50545..51378 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig792.8.1mRNA_P-littoralis_Contig792.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig792 50436..51865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig792.8.1 ID=prot_P-littoralis_Contig792.8.1|Name=mRNA_P-littoralis_Contig792.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=278bp
MANIGIADFVGDVVDIGKKIPEAIENLEEMIINLLNGMKGKLFDVVNGAV
SGTVNGVNKSVNTLPDGLENGIRGIVSGINNAMDVAERGVGGIVTGVNNS
MNSVESVVNGVSNGMEGSVYRIVGSVNSVVSKISSIKNKEIKVSLWGVKP
FSFLGDTPTVRTLNIPTLNIKDMHAKAQLPKRQGTKHPGDQAEAPHDPRT
GGPGSGRFQHASYPGLRIFFGKDCLPEVIGREHLRDGNGAPIRRGCNTVV
NRHHRGRVDVNIHQREPDFGEYRGEAW*
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