mRNA_P-littoralis_Contig791.9.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig791.9.1
Unique NamemRNA_P-littoralis_Contig791.9.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF)

HSP 1 Score: 202 bits (515), Expect = 1.130e-59
Identity = 113/253 (44.66%), Postives = 146/253 (57.71%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYDNHLHRVTDCLEFFAPRFPQMCKKIETKGGNFI---GFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAY 747
            YP RW DLQ  FGR  + LS IFNEV+D  Y++H H + D L+          + I  KG       GFID   R   RP      Q  +Y GH   H L +QSV   +G++  ++GP  GRRHD+ +L  SGL  +L  LQ  N   Y +YGD AY +  ++   FRG  LT  Q+ +N+ + KLRVAVEW FGK+ Q F F+DF KN+K+ LQ V KYY +A LLTN HTC+  S TG  F++  PSLE Y
Sbjct:  146 YPNRWCDLQSLFGRSESELSLIFNEVIDDIYESH-HHLIDALDLVWLDPQTFSQAIHAKGAPLDQCWGFIDGTPRPIARP---IRSQRIMYSGHKRVHCLKFQSVQAPNGLIAHLFGPIEGRRHDAFMLGESGLADKLRPLQRPNGEPYVIYGDPAYGLTRNILAPFRGAQLTHDQQEFNRRMSKLRVAVEWGFGKICQQFAFLDFKKNMKVLLQPVGKYYVVAALLTNCHTCLYNSQTGRYFELYPPSLEDY 394          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: UPI00106D38F2 (uncharacterized protein LOC114539259 n=4 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D38F2)

HSP 1 Score: 188 bits (477), Expect = 1.960e-54
Identity = 108/259 (41.70%), Postives = 146/259 (56.37%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYDNHLHRVTDCLEF-FAP-RFPQMCKKIETKGG---NFIGFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAAL---QEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAYF 750
            YP R+ D+   FGR    LS I N VVD+ YD+H HRV+   E  F+P         I  KG    N +GFID   R   RPG    +Q  +Y+GH   H + +QSV   +GM+  ++GP  GRRHDS +L++SGL  +L      +EG      +YGD AYP+  H+   FR   LT   K +NK + K+R+AVEW FG +V  F F+DF KNLKI L  V K Y +  +L NA TC+ G+ T   F ++ P+L+ YF
Sbjct:  104 YPCRYSDMIPLFGRAVPELSMITNVVVDYIYDHHGHRVSHWNEMLFSPDNLKDYASSIFLKGAALNNCVGFIDGTVRAICRPG---KLQRAVYNGHKRVHAIKFQSVALPNGMIGHLYGPMEGRRHDSFMLAQSGLLNQLQTFCFTEEGQPLC--LYGDPAYPLRVHLQAPFRNAVLTQPMKEFNKSMSKVRIAVEWLFGDIVNYFKFMDFKKNLKIGLSCVGKMYIVCAILRNALTCLYGNQTSEYFGLSPPTLQEYF 357          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: UPI00077A7035 (uncharacterized protein LOC107333236 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7035)

HSP 1 Score: 184 bits (468), Expect = 9.210e-54
Identity = 102/253 (40.32%), Postives = 144/253 (56.92%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYDNHLHRVTDCLEFFAPRFPQMCKKIETKGGNFI---GFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAY 747
            YP RW DL+  FGR  + LS IF+EV+D  +D     + D L+          + I  KG       GFID   R   RP      Q+ +Y GH   H + +QSV   +G++  ++GP  G+RHD+ +L  SGL  +L   Q  N   Y +YGD AY +  ++   +RG  LTD Q+ +N ++ K+R  VEW FGK+ Q+F F+DF KNLK+ LQ + KYY +AV+L N HTC+ GS TG  F++  P+LE Y
Sbjct:   50 YPSRWCDLEAIFGRSESELSLIFHEVLDDIHDR-FSDLLDSLDLIWLDPGLFSQVIHWKGAPLTQCWGFIDGTPRPIARP---TRNQQIMYSGHKRTHCIKFQSVQAPNGLIAHMFGPIEGKRHDAFMLGVSGLADKLRRFQRPNGEPYVIYGDPAYGLSRNILAPYRGVRLTDDQQEFNSQMSKMRCCVEWGFGKISQLFAFLDFKKNLKVLLQPIGKYYLVAVILINCHTCLYGSQTGAYFNLDPPTLETY 298          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: UPI00106B81BB (uncharacterized protein LOC114518718 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B81BB)

HSP 1 Score: 181 bits (459), Expect = 7.230e-53
Identity = 102/254 (40.16%), Postives = 141/254 (55.51%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYDNHLHRVTDC-LEFFAPRFPQMCKKIETKGGNFI---GFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAY 747
            YP RW DL   FGR  + LS IFN+++D   D   + +    L +F P        I  KG       GFID   R   RP      Q+ ++ GH   H + +QSV   +G++  ++GP  GRRHD+ +L  S L  +L  +++ N   Y +YGD AY +  ++   FRG  LT  ++ +NK + KLRV+VEW FGK+ Q F F+DF KN KI LQ + KYY +  LLTN HTC+ GS+T   F +  PSLE Y
Sbjct:   13 YPNRWCDLVSIFGRSESELSLIFNKILDDICDRFSYLLDSLDLVWFDPEL--FSNPIHNKGAPLTQCWGFIDGTVRPIPRP---IRNQQIMFSGHKRTHCIKFQSVHAPNGLIANMFGPVEGRRHDAFILGVSNLADKLCRIRQPNGEPYIIYGDPAYGVTDNILAPFRGVFLTADEQEFNKRMSKLRVSVEWGFGKIAQYFAFLDFKKNQKILLQPIGKYYLVGTLLTNCHTCLYGSLTSSYFGVQPPSLETY 261          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: A0A6S7FVW6_PARCT (DDE Tnp4 domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FVW6_PARCT)

HSP 1 Score: 183 bits (464), Expect = 1.580e-52
Identity = 98/256 (38.28%), Postives = 142/256 (55.47%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYDNHLHRVTDCLE-FFAPRFPQM-CKKIETKGG---NFIGFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAYF 750
            YP R+ D+   FGR  + L  IFNEV+D+ Y+ H HR+    + F +P+  Q+    I  KG    N  GF+D   R+  RP      Q  + +GH   H + +QSVV  +G++  + GP  G+RHDS++L  SGL   L  +   N     +YGD AYP+  H+   FR   LT A   +N+E+ ++RV+VEW FG + + F FVDF + +K+ L  V K Y +A LL NAHTC+  +I    F +  PS+  YF
Sbjct:  104 YPCRYSDMVSRFGRNPSELCLIFNEVLDFLYERHHHRLQSWNQPFLSPQILQIYADAIHNKGAPLDNCFGFVDGTVRQIPRP---KYHQRVMCNGHKRVHSIKFQSVVLPNGLIGNLAGPYEGKRHDSMMLQESGLLTNLQQIAFYNNNPLSIYGDPAYPLGVHLQAPFRERELTPAMAEFNREMSRVRVSVEWMFGNITKYFSFVDFKRQMKLHLSPVGKIYTVAALLQNAHTCLYENIVSHFFYLKPPSIHEYF 356          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: A0A6P8HEE0_ACTTE (uncharacterized protein LOC116291725 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HEE0_ACTTE)

HSP 1 Score: 182 bits (462), Expect = 3.480e-52
Identity = 107/255 (41.96%), Postives = 141/255 (55.29%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYDN--HLHRVTDCLEFFAPRFPQMCKKIETKGGNFI---GFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAY 747
            YP RW DL   FGR  + LS IFN+V+D  YD   HL    D +      F Q+   I  KG       GFID   R   RP    A Q  +Y GH   H L +QSV   +G++  ++GP  GRRHD+ +L  SGL  +L   Q+ +   Y +YGD AY I  ++   FRG  L   Q+ +N  + K+RV VEW FGK+ Q+F F+DF +NLK+ LQ  AKYY +A +L N HTC+ GS T   F +  P+LE Y
Sbjct:  109 YPNRWCDLVPIFGRPESELSLIFNKVLDDIYDRFKHLLESLDLIWLDPQLFSQV---IYDKGAPLEQCWGFIDGTPRPIARP---TANQRIMYSGHKRTHCLKFQSVQAPNGLIAHMYGPIEGRRHDAFMLGESGLLNKLQRFQKPSGEPYVIYGDPAYGITQNIISPFRGARLPPDQQQFNSLMSKVRVTVEWGFGKITQLFAFLDFKRNLKVLLQPTAKYYLVACVLVNCHTCLYGSQTSKFFGLDPPTLERY 357          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: A0A6J8AX30_MYTCO (DDE Tnp4 domain-containing protein n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AX30_MYTCO)

HSP 1 Score: 180 bits (457), Expect = 1.320e-51
Identity = 100/256 (39.06%), Postives = 142/256 (55.47%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYDNHLHRVTDCLEFFAPR--FPQMCKKIETKGG---NFIGFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQ-YRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAY 747
            YP R  DL+  FGR  T +S I N V+++ YD H H + D    +       +    I  +     N  GFI    R   RP      Q  L++GH   H + +QS+V  +G++  ++GP  GRRHD+ LL  SG+ G L       T   Y +YGD AYP+ +H+ + FRG  ++ AQ  +NK++  +R  VEW FGK++ +F F+D+ KNLK+ LQ V KYY +  +L N HTC+ GS TG  FD+  PSLE Y
Sbjct:   91 YPSRLSDLKSVFGRSVTAMSIIINTVLNFVYDAHNHLLHDLNSNWLSHRHLQEYADAIAARDAPLLNCWGFIYGTVRPLCRP---TTNQRILFNGHKRVHAIKFQSIVAPNGLVANMYGPIEGRRHDAGLLRESGICGELQTHMTTPTGDIYVIYGDPAYPMTTHIIKTFRGGVISAAQARFNKKISAVRTCVEWTFGKILTLFAFLDYKKNLKLYLQPVGKYYLVGTILVNCHTCLYGSETGHYFDIDPPSLENY 343          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: UPI00077AC7F2 (uncharacterized protein LOC107350804 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AC7F2)

HSP 1 Score: 180 bits (456), Expect = 3.410e-51
Identity = 105/255 (41.18%), Postives = 142/255 (55.69%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYD--NHLHRVTDCLEFFAPRFPQMCKKIETKGGNFI---GFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAY 747
            YP RW DL   FGR+   LS IFN+V+D  Y+  NHL    D +      F Q    +E KG       GFID   R   RP      Q  ++ GH   H L +QSV   +G++  ++GP  GRRHD+ +L  SGL  +L  LQ      Y +YGD AY +  ++   FRG  LT+ ++ +N ++ K+R  VEW FGK+ Q F F+DF KNL++ LQ V KYY +A +L N HTC+ GS T   F++  PSLE Y
Sbjct:  118 YPSRWCDLAPVFGRDEPQLSLIFNKVMDDIYERFNHLLTSLDLVWLDPEMFSQA---VEAKGAPLHQCWGFIDGTPRPIARP---IRNQRIMFSGHKRTHCLKFQSVQAPNGIIAHMFGPIEGRRHDAFMLGISGLADKLERLQTPTGEPYVIYGDPAYGLTRNILAPFRGVQLTNDEQLFNTQMSKVRTCVEWGFGKICQNFAFLDFKKNLRVLLQPVGKYYLVASILVNCHTCLYGSQTSTYFNLEPPSLERY 366          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: UPI00106A72DF (uncharacterized protein LOC114526587 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A72DF)

HSP 1 Score: 175 bits (444), Expect = 8.400e-51
Identity = 103/248 (41.53%), Postives = 138/248 (55.65%), Query Frame = 1
Query:   34 FGREYT*LSRIFNEVVDWAYDNHLHRVTDCLEF-FAP-RFPQMCKKIETKGG---NFIGFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAAL---QEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAYF 750
            FGR    LS I N VVD+ YD+H HRV+   E  F+P         I  KG    N +GFID   R   RPG    +Q  +Y+GH   H + +QSV   +GM+  ++GP  GRRHDS +L++SGL  +L      +EG      +YGD AYP+  H+   FR   LT   K   K + K+R+AVEW FG +V  F F+DF KNLKI L  V K Y +  +L NA TC+ G+ T   F ++ P+L+ YF
Sbjct:    5 FGRAVPELSMITNVVVDYIYDHHGHRVSHWNEMLFSPDNLKDYASSIFLKGAALNNCVGFIDGTVRAICRPG---KLQRAVYNGHKRVHAIKFQSVALPNGMIGHLYGPMEGRRHDSFMLAQSGLLNQLQTFCFTEEGQPLC--LYGDPAYPLRVHLQAPFRNAVLTQPMKELYKSMSKVRIAVEWLFGDIVNYFKFMDFKKNLKIGLSCVGKMYIVCAILRNALTCLYGNQTSEYFGLSPPTLQEYF 247          
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Match: UPI001CF223A5 (uncharacterized protein LOC122949353 isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF223A5)

HSP 1 Score: 179 bits (453), Expect = 1.990e-50
Identity = 102/253 (40.32%), Postives = 136/253 (53.75%), Query Frame = 1
Query:    1 YPGRWQDLQREFGREYT*LSRIFNEVVDWAYDNHLHRVTDCLEFFAPRFPQMCKKIETKGGNFIG---FIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQSVVFAHGMM-EIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAY 747
            YP RW DL   FGR  + LS IFN+++D  YD   H + D L+            +  KG    G   FID   R   RP      Q  +Y GH   H L +QSV   +GM+  ++GP  GRRHD+ +L  SGL+ +L    + N   Y +YGD AY I  ++   FR   LTD ++ +N  + K+R  VEW F K+ Q F ++DF KNLKI LQ V KYY +A +L N HTC  GS T   F++  PS+E Y
Sbjct:  149 YPNRWCDLVPVFGRTVSELSLIFNKIMDDIYDR-FHHLVDNLDLVWLDPEAFADAVYEKGAPLTGCWGFIDGTPRPIARP---VRNQRIMYSGHKRTHCLKFQSVQAPNGMIAHMFGPIEGRRHDAFMLGVSGLSAKLRRFVQHNGEPYVIYGDPAYGITQNIISPFRQAHLTDDEQEFNTRMSKVRTCVEWGFAKICQNFAYLDFKKNLKILLQPVGKYYLVACILINCHTCFYGSQTSTYFNLEPPSVETY 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig791.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000A2A66BF1.130e-5944.66protein ALP1-like isoform X1 n=2 Tax=Exaiptasia di... [more]
UPI00106D38F21.960e-5441.70uncharacterized protein LOC114539259 n=4 Tax=Dendr... [more]
UPI00077A70359.210e-5440.32uncharacterized protein LOC107333236 n=1 Tax=Acrop... [more]
UPI00106B81BB7.230e-5340.16uncharacterized protein LOC114518718 n=1 Tax=Dendr... [more]
A0A6S7FVW6_PARCT1.580e-5238.28DDE Tnp4 domain-containing protein n=3 Tax=Paramur... [more]
A0A6P8HEE0_ACTTE3.480e-5241.96uncharacterized protein LOC116291725 n=1 Tax=Actin... [more]
A0A6J8AX30_MYTCO1.320e-5139.06DDE Tnp4 domain-containing protein n=2 Tax=Mytilus... [more]
UPI00077AC7F23.410e-5141.18uncharacterized protein LOC107350804 n=1 Tax=Acrop... [more]
UPI00106A72DF8.400e-5141.53uncharacterized protein LOC114526587 n=1 Tax=Dendr... [more]
UPI001CF223A51.990e-5040.32uncharacterized protein LOC122949353 isoform X1 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig791contigP-littoralis_Contig791:22525..23796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7668.SPU_016560-tr
PFAMsDDE_Tnp_4
Model size759
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.31e-39
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota,3A38W@33154|Opisthokonta,3BS4I@33208|Metazoa,3D9UV@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size606
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791621.8249273-UTR-P-littoralis_Contig791:22524..226771680791621.8249273-UTR-P-littoralis_Contig791:22524..22677Pylaiella littoralis U1_48UTRP-littoralis_Contig791 22525..22677 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791621.8439295-CDS-P-littoralis_Contig791:22677..227021680791621.8439295-CDS-P-littoralis_Contig791:22677..22702Pylaiella littoralis U1_48CDSP-littoralis_Contig791 22678..22702 +
1680791621.8539903-CDS-P-littoralis_Contig791:23215..237961680791621.8539903-CDS-P-littoralis_Contig791:23215..23796Pylaiella littoralis U1_48CDSP-littoralis_Contig791 23216..23796 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig791.9.1prot_P-littoralis_Contig791.9.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig791 22678..23796 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig791.9.1

>prot_P-littoralis_Contig791.9.1 ID=prot_P-littoralis_Contig791.9.1|Name=mRNA_P-littoralis_Contig791.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=202bp
MCKKIETKGGNFIGFIDEAFRRNTRPGGDPAVQEQLYDGHHCAHGLAWQS
VVFAHGMMEIWGPETGRRHDSLLLSRSGLNGRLAALQEGNTTQYRVYGDA
AYPILSHVDRGFRGEGLTDAQKAYNKELYKLRVAVEWQFGKVVQIFPFVD
FAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFCFDMTAPSLEAYFA
F*
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mRNA from alignment at P-littoralis_Contig791:22525..23796+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig791.9.1 ID=mRNA_P-littoralis_Contig791.9.1|Name=mRNA_P-littoralis_Contig791.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1272bp|location=Sequence derived from alignment at P-littoralis_Contig791:22525..23796+ (Pylaiella littoralis U1_48)
TATCCTGGACGCTGGCAGGACCTGCAAAGGGAGTTCGGCCGAGAGTACAC CTAGTTGAGTCGAATTTTCAACGAGGTGGTCGACTGGGCGTACGACAACC ACCTGCACAGGGTGACTGACTGCCTGGAGTTCTTCGCTCCACGCTTCCCT CAGATGTGCAAGAAGATAGAAACGAAAGGTAACCATTTTAACGGCGTCGT ACTCGGTGTTCTCGTGAAGCAGAAAGCCAGGGTTGTGCCGCTGCCGCCGG TTGATAATTGCCCGCCTGAGCCGAGGCCCCCTTTTTTATGTTTGGCATAC AGACACTAGTACGATGTAAACACAAAGCCACGTGAAGATGATACACAACA GAGCAGCAGCAGCCACGTTAGCTACAGCGGTTTTAACCTTGCCACAGCTG GTGGTTTTGCGCGCACTGCTGGTTGTGCAATGAGGAGATTTCGTTGCGCT CTCTGCCTGTCTCTCTCTTTCTCTCTTTATCTGTGTGTGTTGTGGGCGCA CGGTAGCAGCAGCACACACAGAAGTGCAGCGTTTTGGACACAGAGCCCCA AATAACCAAACGGACCTGAGTCATGGACGTAAAATTCATCAAGGAAAACA GGTCACACATATCAGAGCCTCTTGTATGCGCTGCGTCGCTCCTTTTTTCG GTTTCGTTTTCTTCGTACATCAGGTGGAATGGTATGCGAAGGCGGTAACT TCATCGGGTTCATCGACGAGGCATTCAGGAGGAACACTCGCCCAGGGGGG GATCCGGCAGTGCAGGAGCAATTGTACGACGGTCACCACTGCGCCCACGG CCTTGCTTGGCAATCAGTTGTCTTTGCTCACGGAATGATGGAAATTTGGG GACCGGAGACAGGGCGGCGACACGACTCCCTTCTTCTGTCGAGGAGCGGA CTGAACGGGAGACTCGCCGCTCTGCAAGAAGGCAACACTACGCAGTACAG GGTGTACGGCGATGCTGCATACCCCATCTTGTCTCACGTCGACCGGGGTT TCCGCGGAGAGGGTCTCACAGATGCGCAGAAGGCCTACAACAAGGAGCTT TATAAGCTCAGGGTGGCGGTGGAGTGGCAGTTCGGCAAGGTCGTGCAGAT TTTCCCGTTTGTCGACTTCGCGAAAAACCTGAAGATCAGGCTGCAGGCGG TCGCGAAGTACTACGCCTTGGCTGTACTGCTCACCAACGCGCACACCTGC ATCTCCGGGAGCATCACCGGCTTCTGCTTCGACATGACCGCGCCGTCGCT AGAGGCGTACTTTGCGTTCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig791:22525..23796+

>mRNA_P-littoralis_Contig791.9.1 ID=mRNA_P-littoralis_Contig791.9.1|Name=mRNA_P-littoralis_Contig791.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=606bp|location=Sequence derived from alignment at P-littoralis_Contig791:22525..23796+ (Pylaiella littoralis U1_48)
ATGTGCAAGAAGATAGAAACGAAAGGCGGTAACTTCATCGGGTTCATCGA
CGAGGCATTCAGGAGGAACACTCGCCCAGGGGGGGATCCGGCAGTGCAGG
AGCAATTGTACGACGGTCACCACTGCGCCCACGGCCTTGCTTGGCAATCA
GTTGTCTTTGCTCACGGAATGATGGAAATTTGGGGACCGGAGACAGGGCG
GCGACACGACTCCCTTCTTCTGTCGAGGAGCGGACTGAACGGGAGACTCG
CCGCTCTGCAAGAAGGCAACACTACGCAGTACAGGGTGTACGGCGATGCT
GCATACCCCATCTTGTCTCACGTCGACCGGGGTTTCCGCGGAGAGGGTCT
CACAGATGCGCAGAAGGCCTACAACAAGGAGCTTTATAAGCTCAGGGTGG
CGGTGGAGTGGCAGTTCGGCAAGGTCGTGCAGATTTTCCCGTTTGTCGAC
TTCGCGAAAAACCTGAAGATCAGGCTGCAGGCGGTCGCGAAGTACTACGC
CTTGGCTGTACTGCTCACCAACGCGCACACCTGCATCTCCGGGAGCATCA
CCGGCTTCTGCTTCGACATGACCGCGCCGTCGCTAGAGGCGTACTTTGCG
TTCTAG
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