prot_P-littoralis_Contig791.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig791.2.1
Unique Nameprot_P-littoralis_Contig791.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length108
Homology
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BLAST of mRNA_P-littoralis_Contig791.2.1 vs. uniprot
Match: Q8QN61_ESV1K (EsV-1-229 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN61_ESV1K)

HSP 1 Score: 115 bits (288), Expect = 1.250e-29
Identity = 63/108 (58.33%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   29 RVRRQQTYDCFRDHGAEELSPVQALGKLSAV------------------------------GLVTTDSQMGAKKQITHYVDGHVLNPPVTIWQRSYISGISAKDLGHK 106
            R+RRQ+ YDCF D G EELSPVQALGKLSAV                              GLVTTDSQMGAKK ++H+ DGHVLNPPVT WQRSYISGI AK LG K
Sbjct:   26 RIRRQRVYDCFGDQGPEELSPVQALGKLSAVAMLTTVRVGDPGEDASMAQARPYLSEVNKRGLVTTDSQMGAKKHLSHHFDGHVLNPPVTQWQRSYISGILAKGLGGK 133
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig791.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QN61_ESV1K1.250e-2958.33EsV-1-229 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig791contigP-littoralis_Contig791:4848..5171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig791.2.1mRNA_P-littoralis_Contig791.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig791 4590..5171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig791.2.1 ID=prot_P-littoralis_Contig791.2.1|Name=mRNA_P-littoralis_Contig791.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=108bp
MSSPPGSPPGTPPSQRGGQPPPVRRSSNRVRRQQTYDCFRDHGAEELSPV
QALGKLSAVGLVTTDSQMGAKKQITHYVDGHVLNPPVTIWQRSYISGISA
KDLGHKG*
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