mRNA_P-littoralis_Contig790.16.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig790.16.2
Unique Name	mRNA_P-littoralis_Contig790.16.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 4.920e-120
Identity = 179/290 (61.72%), Postives = 220/290 (75.86%), Query Frame = 1

Query:  145 MKFSWESVMMMTVLQLSVFVTHASTCPGGISGHSGNDVVCCPLGCGQCGGIGCTYSGVDAGLGSESCCGSYIKSNGKLCSETGEAPCILGDTDDDVDTNDESTHEGGEYAKEFSGDGTYYTPTTEGNCAFFTSVPGMYDGMIPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCPGEDLSFVSPSANPWYLKVQPRGTKTPVKSLTINGQTADRTADNHFIRENTGEGWSGTQTLKITTVAGETETVDVS 1014
            MK SWES +++ VL L V V    TC  GI G  GN VVCCPLGCG+C G GCT  G + GLG++SCCG+ IK++G+LCSETG APCI+    D+   +   ++ GG+Y +E+SG+GTYY  TT G C+FF  VP MYDGMIPVAL+A QYG+S MCGAC+EG ASG G+G  P+PSTFKA+++D+CPEC +GDLDF + GDGRWDI WKFV+CPGE+ SFVSPSANP+Y KVQPRGT TPV SLT++GQ+A RT DNHF   N G  WSG QT+  TTV+G TET +VS
Sbjct:    1 MKLSWESALLLPVLLLPV-VVQGDTCTNGIEGIDGNGVVCCPLGCGRCAGEGCTAFGSENGLGADSCCGNAIKASGRLCSETGSAPCII----DEEGPSPTPSYSGGQYGEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVS 285

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 6.300e-58
Identity = 103/186 (55.38%), Postives = 128/186 (68.82%), Query Frame = 1

Query:  460 GGEYAKEFSGDGTYYTPTTEGNCAFFTSVPGMYDGMIPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCPGEDLSFVSPSANPWYLKVQPRGTKTPVKSLTINGQTADRTADNHFIREN-TGEGWSGTQTLKITTVAGETETVDVS 1014
            GG Y   F GDGTYYT  + GNC FF   P +Y GM PVAL+A+QYG+S MCG+C+EGE +G G G  P+  TFK ++ D+CPECHEGDLDF    DGRWDI W+FV+CPGE++SF      P+Y K+QPRGT TPV+SLTI G+ A RT DNHF  E+ +G  W   Q +  TTV G  E  ++S
Sbjct:  345 GGVYGTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMS 529

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 3.480e-57
Identity = 105/187 (56.15%), Postives = 130/187 (69.52%), Query Frame = 1

Query:  460 GGEYAKEFSGDGTYYTPTTEGNCAFFTSVPGMYDGMIPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCP-GEDLSFVSPSANPWYLKVQPRGTKTPVKSLTINGQTADRTADNHFIREN-TGEGWSGTQTLKITTVAGETETVDVS 1014
            GGEY   F+G+GTYYT T+ GNC FF   P +YDGM PVAL+  QYG+S MCGAC+EGE +G G+G+ PV  TFK ++ D+CPEC EGDLDF    DGRWDI WKFV CP GE++SF       +Y K+QPRGT TPV+SLTI G+ A RT DNHF  E+ +G+ W   Q +  TTV G  E  ++S
Sbjct:  308 GGEYGITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTTVGGVVEETEMS 493

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 197 bits (501), Expect = 2.850e-53
Identity = 92/186 (49.46%), Postives = 126/186 (67.74%), Query Frame = 1

Query:  463 GEYAKEFSGDGTYYTPTTEGNCAFFTSVPGMYDGMIPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCPGEDLSFVSPSANPWYLKVQPRGTKTPVKSLTINGQTADRTADNHFIRENTGEGWSGTQTLKITTVAGETETVDVSFS 1020
            G+Y + F GDGTYY  TT GNCA  + +PGMY GM+PVA++ +QY  S+ CGAC+     G+G+GA PV  TFKAYV D+CPEC  GD+D    GDGRW + W+F+ CPGE + F+   +N +YLK+QPRG KTPV   ++NGQ   +T DN +I +N G G+    T+++ TV  E  TV +++S
Sbjct:   18 GDYRRTFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQN-GGGFRYPLTVQMRTVLNEWITVKLAYS 202

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 5.280e-53
Identity = 98/175 (56.00%), Postives = 119/175 (68.00%), Query Frame = 1

Query:  469 YAKEFSGDGTYY--TPTTEGNCAFFTSVPGMYDGMIPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCPG-EDLSFVSPSANPWYLKVQPRGTKTPVKSLTINGQTADRTADNHFIRENTGEGWSGTQTLKITTV 984
            Y ++FSGD TYY  TP  +GNCA  + +P MYDGMIPVAL+  QY +S MCGACIEGE  GEG G  PV   FKAYV+D+CPEC  GDLDF   GDGRWDISW FV C G  D +F+   +N +Y K+QPRG ++PV+ L ING  A+R+ DN FI E  G  + G Q +   TV
Sbjct:   37 YDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILE--GGPFDGEQEVHTKTV 209

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 195 bits (495), Expect = 2.010e-52
Identity = 90/185 (48.65%), Postives = 127/185 (68.65%), Query Frame = 1

Query:  466 EYAKEFSGDGTYYTPTTEGNCAFFTSVPGMYDGMIPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCPGEDLSFVSPSANPWYLKVQPRGTKTPVKSLTINGQTADRTADNHFIRENTGEGWSGTQTLKITTVAGETETVDVSFS 1020
            +Y + F G+GTYY  TT GNCA  + +P MY+GM+PVA++ +QY NS  CGAC++    G+G+GA P+  TFKAYV D+CPEC  GD+D    GDGRW + WKF+ CPGE + F+   +N +YLK+QPRG KTPV +L++ GQ   +T DN +I +N G G+    T+++ TV  E  TV +++S
Sbjct:   24 DYYRVFHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQN-GGGFRFPITVQMRTVLNEWITVQLAYS 207

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 157 bits (398), Expect = 3.640e-40
Identity = 74/150 (49.33%), Postives = 92/150 (61.33%), Query Frame = 1

Query:  484 SGDGTYYTPTTEGNCAFFTSVPGMYDGMIPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCP--GEDLSFVSPSANPWYLKVQPRGTKTPVKSLTINGQTADRTADNHFI 927
            +G+GTY+ PTT GNCA    +P  Y G++ VA+S + Y  S  CGAC+    SG+GAGA P+  TF AYV D+CPEC  GDLD    GDGRW +SW  V CP  G    F+   +NP YLKVQ RG   P  S+++ G    RT DN FI
Sbjct:   49 AGEGTYFGPTTRGNCAL-DPLPAQYGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFI 197

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: A0A7S4IRK7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRK7_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 1.690e-29
Identity = 72/181 (39.78%), Postives = 104/181 (57.46%), Query Frame = 1

Query:  484 SGDGTYYTPTTEGNCAFFTSVPGMYDG---MIPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCPGE--DLSFVSPSANPWYLKVQPRGTKTPVKSLTI---NGQ---TADRTADNHFIRENTGEGWSGTQTLKITTVAGE 993
            SG+GTYY P++ G+C    ++P +         VA+++ QY  S  CG CI+    G G+GA P+  TF  YVSD CPEC  GDLD    GDGRW+I W  V CPG   DL ++   +N ++LKVQ R  + PV  L +   +GQ   T   T+DN F  +++    SG+ T+++ +V G+
Sbjct:   20 SGEGTYYGPSSSGSCTLDFNLPPVAQTSEIFSTVAMNSPQYYGSLTCGMCIQMTGEGVGSGADPIDGTFIVYVSDLCPECASGDLDVAQSGDGRWEIEWTAVDCPGNYGDLQYLGQGSNDFFLKVQVRNHRVPVSQLYLLDADGQSRITMTPTSDNFFTYQSSSS-LSGSYTVQVESVDGQ 199

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: A0A2C9LCA8_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LCA8_BIOGL)

HSP 1 Score: 121 bits (304), Expect = 3.370e-27
Identity = 67/184 (36.41%), Postives = 95/184 (51.63%), Query Frame = 1

Query:  469 YAKEFSGDGTYYTPTTEGNCAFFTSVP-GMYDGMIP--VALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCP--GEDLSFVSPSANPWYLKVQPRGTKTPVKSLTI--NG--QTADRTADNHFIRENTGEGWSGTQTLKITTVAGE 993
            + K + GDGTYY  T +G C     +P    D  I   VAL+  Q+ NS  CG CI+   SG G G  P+      YV D CP CHEGD+DF L GDGRW+I+ + V CP     + +    +N WY+K+Q R  + P+  + I  NG  QT   + D +++    G    G   +++T   G+
Sbjct:   32 FTKSYKGDGTYYGETVDGTCQIARPLPMAASDPKISALVALNRPQFLNSMTCGMCIKVVGSGHGLGNNPIVGEHIVYVKDMCPVCHEGDVDFALDGDGRWNITMQAVQCPVGSSTIQYAFQGSNAWYIKLQIRNARIPITGVQIEKNGAWQTLTHSIDGYWLLSGGGAIADGPIKVRMTAANGQ 215

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BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Match: A0A2T7NDP7_POMCA (Expansin-like EG45 domain-containing protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NDP7_POMCA)

HSP 1 Score: 119 bits (299), Expect = 1.280e-26
Identity = 70/190 (36.84%), Postives = 99/190 (52.11%), Query Frame = 1

Query:  469 YAKEFSGDGTYYTPTTEGN-CAFFTSVPGMYDGM-IPVALSASQYGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLVGDGRWDISWKFVSCP--GEDLSFVSPSANPWYLKVQPRGTKTPVKSLTING----QTADRTADNHFIRENTGEGWSGTQTLKITTVAGETETVDVS 1014
            Y   F GDGTYY  +  G  C++    P    G   PVAL++ Q+ NS MCG+C     +G G+G +P+  TF  +V + CPECH GDLD  + GDGRWDI+ + V CP    ++ F    +NP+Y+K+Q R  + PV  + I           T D  F+    G   SG   +++T V G   T  +S
Sbjct:   29 YKSTFKGDGTYYGSSGGGGTCSYGVQNPPAASGTKYPVALNSPQFMNSVMCGSCWRVTGAGTGSGHSPITGTFTVFVDNLCPECHAGDLDLGVSGDGRWDITIQAVQCPVGSGNVQFKFQGSNPYYVKLQVRNARLPVHVMEIEQGGSFHAMTHTGDGFFLYN--GGPISGAFRVRLTAVNGAQITDTIS 216

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig790.16.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRN1_ECTSI	4.920e-120	61.72	Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5KBW3_9PHAE	6.300e-58	55.38	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
D8LGP4_ECTSI	3.480e-57	56.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
F2Z7J0_9FLOR	2.850e-53	49.46	Uncharacterized protein n=1 Tax=Gracilariopsis and...	[more]
D8LHU1_ECTSI	5.280e-53	56.00	Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A2V3ISL2_9FLOR	2.010e-52	48.65	Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=...	[more]
A0A1X6NJE1_PORUM	3.640e-40	49.33	Uncharacterized protein (Fragment) n=1 Tax=Porphyr...	[more]
A0A7S4IRK7_9EUKA	1.690e-29	39.78	Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ...	[more]
A0A2C9LCA8_BIOGL	3.370e-27	36.41	Uncharacterized protein n=2 Tax=Biomphalaria glabr...	[more]
A0A2T7NDP7_POMCA	1.280e-26	36.84	Expansin-like EG45 domain-containing protein n=1 T...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig790	contig	P-littoralis_Contig790:101540..106776 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D8LRN1
Model size	2817
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K20628
Hectar predicted targeting category	signal peptide
Exons	5
Evalue	9.76e-129
EggNOG OGs	2D16Q@1\|root,2SGXE@2759\|Eukaryota
Cds size	882
BRITE	ko00000

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig790.16.2	prot_P-littoralis_Contig790.16.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig790 103331..106026 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791621.3950374-UTR-P-littoralis_Contig790:101539..103330	1680791621.3950374-UTR-P-littoralis_Contig790:101539..103330	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig790 101540..103330 -
1680791621.458852-UTR-P-littoralis_Contig790:106026..106053	1680791621.458852-UTR-P-littoralis_Contig790:106026..106053	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig790 106027..106053 -
1680791621.473536-UTR-P-littoralis_Contig790:106659..106776	1680791621.473536-UTR-P-littoralis_Contig790:106659..106776	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig790 106660..106776 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791621.4090195-CDS-P-littoralis_Contig790:103330..103655	1680791621.4090195-CDS-P-littoralis_Contig790:103330..103655	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig790 103331..103655 -
1680791621.4229722-CDS-P-littoralis_Contig790:103839..103966	1680791621.4229722-CDS-P-littoralis_Contig790:103839..103966	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig790 103840..103966 -
1680791621.4384134-CDS-P-littoralis_Contig790:104378..104741	1680791621.4384134-CDS-P-littoralis_Contig790:104378..104741	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig790 104379..104741 -
1680791621.4483721-CDS-P-littoralis_Contig790:105959..106026	1680791621.4483721-CDS-P-littoralis_Contig790:105959..106026	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig790 105960..106026 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig790:101540..106776-
coding sequence from alignment at P-littoralis_Contig790:101540..106776-

protein sequence of mRNA_P-littoralis_Contig790.16.2

>prot_P-littoralis_Contig790.16.2 ID=prot_P-littoralis_Contig790.16.2|Name=mRNA_P-littoralis_Contig790.16.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=294bp
MKFSWESVMMMTVLQLSVFVTHASTCPGGISGHSGNDVVCCPLGCGQCGG
IGCTYSGVDAGLGSESCCGSYIKSNGKLCSETGEAPCILGDTDDDVDTND
ESTHEGGEYAKEFSGDGTYYTPTTEGNCAFFTSVPGMYDGMIPVALSASQ
YGNSEMCGACIEGEASGEGAGATPVPSTFKAYVSDQCPECHEGDLDFMLV
GDGRWDISWKFVSCPGEDLSFVSPSANPWYLKVQPRGTKTPVKSLTINGQ
TADRTADNHFIRENTGEGWSGTQTLKITTVAGETETVDVSFSS*

mRNA from alignment at P-littoralis_Contig790:101540..106776-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig790.16.2 ID=mRNA_P-littoralis_Contig790.16.2|Name=mRNA_P-littoralis_Contig790.16.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5237bp|location=Sequence derived from alignment at P-littoralis_Contig790:101540..106776- (Pylaiella littoralis U1_48)
TTCACACTTCATCCCCCTCCCTCTCCTCCCCCTTCCGTCCCATCAACTAA
TTTCTTCTTCTCTGGCATAGCGTATTCGAGCATTCCACCTCTCAGCTGCT
CGGAAACCAACTTTCATGTGAGTCAGGCATGACATCACTACAGCAGCAGT
GTTCCGCTCCTCTGGTCTACTTTCACTCGTGAGGCTGATGAAGCAGTTTG
TGCACATTGCCCAACGTGTGCTGTGTAGCCGTGGACACCTGTCCAGTCAC
TCCTTTGCAGTAGTCGTACGATTGAGAGATGAGCATCAAAGGTGGATGCT
CCGACGTAGTTTGGCACGCGTAGTTTGACGCACAGAACCCGTTGGCAGCG
CAGGTGAAAAAAATTGAATTTGCTGACCTCGACATCGCTGCTCGCGTATG
ATACGATAATCCCTCAAGTTTTGCAACGCGTCTTTTGAGAGCAGAAGTCC
GGAACTCTACAGCAGTAACTTTTATCCTCGGGAACTACACCATGGCGGAT
CGAATCGTACATCACATGTGAAGACGAAAGTAGCCAAGCAATGGAGTTTT
CTTCCCTGGGACAGGTAACCACCGGCTCACAACGGCAGGGCCCACAACAT
GTAATGGTATGCCCGCCATCACCGCGCCTTATCCTTTGACGCCTCCTTCG
TTGCCGCTATCATCCGGGAAATACTGGTGCCGTATCTTCACCCTTCACCT
TTTGTCCCGTGCGTATGAAACAGATACTTTTTCACCCCGGCCAGGTCAAG
ATGAAGTTCTCGTGGGAATCCGTGATGATGATGACGGTGCTGCAGCTGTC
GGTTTTCGTGACACATGGTGAGTTCCTCTCGAACGTGGTCTGGGCTATGT
TCGAGGTATCGCCGGAGCTCGTGCATCCGGTGTGTACTTCGCACTACTTC
ATTGCATGTTTTCTATGAAAATGAAACCTGTGTCAACTCTTGTGTCCAGC
CGCGTTTAACAAAGTTCGGTCTGTCCGATCTCAAATGAGCGTTGATTTAT
CCGTCACGACCAACCACAACAGCAGGAAATGTCCTTATTTCTCCCGTGAA
ATGGATAATATCAACAGCTACGATGCTGCGATGAAGTTTACAGCAGCTGG
TGCAGCAACACATCCAGAGGTGTGCTCCAGTTCCGAGCACCAAATTCAGT
TACGCTCCAGTGCGTTTGAGACACGAGTTGCAGCGAAGACTACAATTATT
TCCAACTTCAAATTAACGAGTCGATCAACGGACATGTGGATTGCGTACCG
GCGTCCAACAGCGAACAGAAGAAATGAAGCGTATTCCGTATTATAGATAC
GCAAGAACACCGCGTTATTCCATACGGCGAGAGAAACTAACGAGCAGTCC
CGACAACAAAAACCGAGGTGGTATGGAACGTGAAGGTAGATGGAAATCCC
CGTTCGCTGCTCCCTTGTTTCCTCAAAATACAAGTAAAAGTAGTTCGAAA
TGGAGAACGTGCACCCTGTACAAGTAACAGAGTCATACGACAAGCCTTAA
AGTTGCTGGTAGGCGGGTTGCCTCTGAGTTTCCAGTAAAACGAATAGTGC
AAGAGTTTTGTGGCTGTTCAGACTTATCGACGTGACGCATATTTCCTCAC
GCACACCGTTCACCTGAGCACACGTTCATCTTCTAATCTATCTCCACTCG
TAAGAAATCCACAGACACATCATACGTATGTGTTCTATAGATCGTTCGTT
TGTTGTCTTTTTTCATTTTCCTGGTAAAAGAGACGTGTTACTCTTGTCGG
CTGGCCGCAATCGTCCGAAACTACTTGAAACATAACGATGAACAGGCAGA
GAAGTGTCCCGGCTTCGCTGAGATGAGTATTTCCCCGCTGCCGTTCGGTC
ACTTATTTCATGAGAGCTCCACGTTTCACTGGGTCGTTTGTGTGCATGGC
ATCAGCTTTGTGCTCATGTAAAATCCCAGCAGCCCGTCCTCGCGAAGGGA
AGAAACACGAGACAACATGTAACTCCCACACGTCTCCAACCCAACCCTGT
CTGTTGCATGCGCTCCCTTGACTTCATGAAAACAGCCAGCACGTGCCCCG
GCGGCATCTCGGGCCACAGCGGCAACGACGTCGTCTGCTGCCCGCTCGGC
TGCGGCCAGTGCGGCGGTATCGGATGCACCTATTCCGGTGTCGACGCCGG
CCTCGGCAGTGAATCCTGCTGCGGCAGTTACATCAAGTCCAACGGGAAAC
TGTGCAGCGAAACCGGGGAAGCACCGTGCATTCTCGGCGATACCGACGAC
GACGTCGACACGAACGACGAGTCCACGCACGAAGGCGGAGAGTACGCAAA
GGAGTTCAGCGGAGACGGCACGTACTACACACCTACGACCGAGGGTAACT
GCGCCTTCTTTACCAGTGTACCTGGCATGTACGACGGCATGATTCCAGGT
GAGACAAGTTTGTCTATGAACCCTCACCTCGCCAGTTGTCTAATACGCAC
TGTAGGAGAGTTGCCAAACCTCGGCCCTCTCTCGTATGTCGATGTCGATA
CACCGCGCGATACGAGGTATTTGTTTACCGATTAGGATGTTAATTTTTAA
ATTAGTCACCAACTTTTTGTGTTGTTCCGTGGCAAACTGTTTCCCTCATC
TGCTGCCCTAAAAAAATGTAACCGCAGGACCGCGTTGTCCCTTTCAATGT
ATTCATTATAAACACTCCCCTGCCTCTAAAAAAAACGTCACCACTAGATT
GTGTTTTTCCTTGGCAAATTGAGTGCATTGCCTGCCGCACTGACGGTTCC
TCTCCTGCCCCCTCCGTCCTGTCTTGGTTCTTCTCGAACATGACGCAAAA
ATGACCCCAGTTGCCTTGAGTGCGTCCCAGTACGGTAACTCCGAAATGTG
CGGCGCGTGTATCGAGGGGGAGGCCAGCGGCGAAGGCGCCGGCGCCACCC
CGGTCCCTTCAACTTTCAAGGCCTACGTTTCCGACCAGTAAGTACCATAG
GCAACGGTAGAAGTGTTGTAGTTGTATTTCCTGCTTCCGAAGAGCAGCAC
CACGAATTCGCGCTTTGCAGTGACGTCCCCACCTCAGCCCCCTCTGTCGT
ACAATCCTGTGTCCCGTATTGTATTGACATTGGTGCCCTCTCCCTCAATT
CCCTCTTGTGGTGTCGTCCAGGTGCCCCGAATGCCACGAGGGTGACCTAG
ACTTCATGTTGGTCGGCGACGGCCGGTGGGACATATCGTGGAAGTTCGTT
TCGTGCCCAGGAGAGGACCTTTCCTTCGTTTCACCCTCCGCGAACCCGTG
GTACCTGAAGGTGCAGCCTCGCGGAACGAAGACGCCCGTGAAGAGCCTCA
CCATCAACGGACAGACGGCAGACAGGACAGCGGATAACCACTTCATCAGG
GAGAACACCGGAGAAGGCTGGTCCGGGACGCAAACCCTGAAAATCACAAC
CGTTGCGGGTGAAACCGAGACCGTAGACGTCTCGTTCTCGTCGTAGTAGG
ATGTGTCGACGACGCCCACTTACTATTTTCAAGATTGTTTGCACCCCCCC
CTCCTCAACAGTGCTCGCGAAGACGAAAGGGAGGTAAATTGCTTGTGATC
GCGTTTTTAGTATGTCAGGAGTGGTCGTCAGAGCGGAAAGGATGGCACAG
CAATTTATGAGTTGCACGTACGTTTCAAGGGAGACGTTTTCAAGTTCGTT
CATGCTGGATCATCAAAGGATATGCCGATTTTGCATTTAATTGAGTCCTG
CCGTGTATTTCGACTAATTTTTGCGCGCAAGCTTTATATATAGTTTTACT
TTGGAGACAGAGTCGATAGAAATGTTGTACATTTATCGGGTTGGAATTAA
TGCAACAGGCCCGAGTTTCAAATGGGTCGAGTTACCACATGTAGAGCCAT
TTTCAGGGCAAAAGGGAAGCAGGTTCCTCGGTGAAATATTAGTGTGGTCT
TGGCATCGGTTGGGATGCTCGGGTAGCACACCCTTCACTCACACACGTTT
ACACTTATGGTTGTGAGTGCGGCCCTTGGCATTTTCAATGACGACTTCGA
GGGGTCGTGATGTGCTTTTCTTCCTCGCCGCCCGTTGTACGCGTTTTCGA
AATGCAATGGGTACAGCCAAAGCTGGGAACGGAAGCAAGCTACTTTTTAG
TTGTTTCTTGCCTTTTGTTATAAACTTATCGGCAGACAGAGTTGTCGAAA
GCAGTTTTCCGAGGGAGATGTGTTGAGATATGACATCTCTCTTGTCTCGT
GTACCAACATGTGGCTTCAATGCTGGTGTTTTTTGTCGAAACGGTTGGCT
GGATTTTTTCCGGAACGGTGGGTTGGGTTGACATAGCCCAATTAAAGGGG
AATCATCTCCTGCTCCGCTCTCAGCGAAGATGCAGGAAGTAGAGCCCTCG
GTTTTTCGTCCGAAGGTGAAGTGGAGAGTTCTTGTATATACGTTGCTGTC
GAGTCATCAAGCCTGGTGGTTTGTACGAGATCTACGATTTTCCTCCCTCG
AACCCTATCTAGATTATTTATTTTTCGTGTCTGCAGGGTAAAGTAGTCAG
GTGTCTTGTTATGCCCGTTACATTATCGCCCAGCCGCGTGCTGGTCGTAG
TATTTTTGAGGCGACGCTCAATCAATTTTGTGTTCGGAAAAAAGCATGCC
CTCCGCGTGAAATCCAGACGAGAGCGAATCTTTTCCGACTGCCGTAGAAT
GAAGCACGCACTGGAAACAAGTGAAGCACGGGACTCCGGAGTAATTGTTA
TTAAATTTTACACAAGTTTCGTGGCATGAACAACTGTCTGCCTTCTACGC
CCTTACCTACTGCCGTGTGGACTAATGTTCCATGCAAACGTACAATTTCA
GCAAGCAGCTCAGCTCCAGCGTAGTCCACGAAGCTACTACTGCGGAATCT
CGGCTCCAGCGATACGTATTTGAGCCATAAACTCTATACCTTGGTCAAGC
ACGTTGGTTTCGAGGACATGATTGGAAGAAATAAAAATGTAACGTGAGAC
AAGAACGGGCGTGACCACCGTCGCGGCGAGGGAAATCCATCGCCGGGAGA
TACATTTTGGGTATCATGTTATGTTGTGCCTAATGTACTCGGGGATCGCC
CAAAAATGCCACACACTTGTGATTCGGTACAATATTCGATTTCCTCCTGG
TAAATCATTATTCCCCTGCAAAATCCCATTAATAGATATTTGTAGCGTTA
GCTCTTAACAAAGTCCATTGCCGCGGAGTCTTCTCATTTTTATTCGCAAA
TCACCCTCCCTTGGCCAGGGTCAACGAAGTTGGAACA

Coding sequence (CDS) from alignment at P-littoralis_Contig790:101540..106776-

>mRNA_P-littoralis_Contig790.16.2 ID=mRNA_P-littoralis_Contig790.16.2|Name=mRNA_P-littoralis_Contig790.16.2|organism=Pylaiella littoralis U1_48|type=CDS|length=882bp|location=Sequence derived from alignment at P-littoralis_Contig790:101540..106776- (Pylaiella littoralis U1_48)
ATGAAGTTCTCGTGGGAATCCGTGATGATGATGACGGTGCTGCAGCTGTC
GGTTTTCGTGACACATGCCAGCACGTGCCCCGGCGGCATCTCGGGCCACA
GCGGCAACGACGTCGTCTGCTGCCCGCTCGGCTGCGGCCAGTGCGGCGGT
ATCGGATGCACCTATTCCGGTGTCGACGCCGGCCTCGGCAGTGAATCCTG
CTGCGGCAGTTACATCAAGTCCAACGGGAAACTGTGCAGCGAAACCGGGG
AAGCACCGTGCATTCTCGGCGATACCGACGACGACGTCGACACGAACGAC
GAGTCCACGCACGAAGGCGGAGAGTACGCAAAGGAGTTCAGCGGAGACGG
CACGTACTACACACCTACGACCGAGGGTAACTGCGCCTTCTTTACCAGTG
TACCTGGCATGTACGACGGCATGATTCCAGTTGCCTTGAGTGCGTCCCAG
TACGGTAACTCCGAAATGTGCGGCGCGTGTATCGAGGGGGAGGCCAGCGG
CGAAGGCGCCGGCGCCACCCCGGTCCCTTCAACTTTCAAGGCCTACGTTT
CCGACCAGTGCCCCGAATGCCACGAGGGTGACCTAGACTTCATGTTGGTC
GGCGACGGCCGGTGGGACATATCGTGGAAGTTCGTTTCGTGCCCAGGAGA
GGACCTTTCCTTCGTTTCACCCTCCGCGAACCCGTGGTACCTGAAGGTGC
AGCCTCGCGGAACGAAGACGCCCGTGAAGAGCCTCACCATCAACGGACAG
ACGGCAGACAGGACAGCGGATAACCACTTCATCAGGGAGAACACCGGAGA
AGGCTGGTCCGGGACGCAAACCCTGAAAATCACAACCGTTGCGGGTGAAA
CCGAGACCGTAGACGTCTCGTTCTCGTCGTAG