mRNA_P-littoralis_Contig79.144.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 147 bits (371), Expect = 2.680e-39 Identity = 66/88 (75.00%), Postives = 80/88 (90.91%), Query Frame = 1
Query: 1 KAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVN 264
+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N
Sbjct: 566 EAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFIN 653
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 123 bits (309), Expect = 3.210e-33 Identity = 58/86 (67.44%), Postives = 68/86 (79.07%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVN 264
GY SADDSKLE LMDILRFF++WR +LE + T+GD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ D P ++N
Sbjct: 55 GYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFIN 138
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 122 bits (305), Expect = 2.540e-30 Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVN 264
YI SADDSKLEE+MDIL F++WR +LE + T+GD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ D P ++N
Sbjct: 445 SYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFIN 530
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 112 bits (280), Expect = 2.800e-30 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVS 234
GYI S DDSKL+ELMDIL FF++WR +LE + T+GD WK HFIT++ WTD RV ILG V MCRYL E DSRFK+S
Sbjct: 3 GYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYLIEKDSRFKIS 78
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 5.010e-22 Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFV 186
GYI SADDSKLEELMDILRFF++WR +LE + T+G WK +FIT++SWTDIRV ILG V
Sbjct: 42 GYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 4.890e-21 Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVS 189
GYI SAD SKL ELMDILRFF++WR +LE + T+GD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 3 GYIRSADRSKL-ELMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 2.550e-19 Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEK---TTVGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKV-SRPRDTPRYVNP 267
G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ S + R+++P
Sbjct: 83 GCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSP 174
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 6.730e-18 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 KAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 216
+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+
Sbjct: 490 RKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDE 559
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 4.730e-17 Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 4 AGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYS 150
AGYI SADDSKLEELMDILRF +WR +LE ++T+GD WK HFIT++S
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 53.5 bits (127), Expect = 2.980e-6 Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 13 ITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 216
ITS D L+ L++IL +F+ W +L D+ F+ + +W D+R++ILGFV+M RY+F DD
Sbjct: 511 ITSKDSPLLDRLLEILEWFDTWWQDLN-LFGGSDLALDDLFLPDQTWDDLRLTILGFVAMTRYVFGDD 577 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig79.144.1 >prot_P-littoralis_Contig79.144.1 ID=prot_P-littoralis_Contig79.144.1|Name=mRNA_P-littoralis_Contig79.144.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=89bp KAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSback to top mRNA from alignment at P-littoralis_Contig79:635389..635657- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig79.144.1 ID=mRNA_P-littoralis_Contig79.144.1|Name=mRNA_P-littoralis_Contig79.144.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=269bp|location=Sequence derived from alignment at P-littoralis_Contig79:635389..635657- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig79:635389..635657- >mRNA_P-littoralis_Contig79.144.1 ID=mRNA_P-littoralis_Contig79.144.1|Name=mRNA_P-littoralis_Contig79.144.1|organism=Pylaiella littoralis U1_48|type=CDS|length=267bp|location=Sequence derived from alignment at P-littoralis_Contig79:635389..635657- (Pylaiella littoralis U1_48)back to top |