mRNA_P-littoralis_Contig79.120.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: A0A6H5KHI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI7_9PHAE) HSP 1 Score: 234 bits (597), Expect = 5.270e-69 Identity = 128/201 (63.68%), Postives = 146/201 (72.64%), Query Frame = 1
Query: 58 SRRALFSKVLRLGAAGGGVILARPSRVVAAGP--------ASVALLRDKSGDTPGGGRGLPSVSYGGSELVLPPVGARTKRIFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTLLTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEGLPKLLAAAVLAPAYFAWSNGRLDKRAGRSGESG 636
+RR L S+ LGA G G LARP + P ++V + D G G G S S GGS LVLP V A TKRIFLARHGQTDLNKL VCQGR+LNPPLNEKGRSQARTLL LD ++CSPLRRARETAGIV+ESHPL F+VS DLNEVDFGGAEGLP++++AA+LAP+Y AWS+GRLDKRAG GESG
Sbjct: 28 TRRDLVSRARLLGAVGVGAALARPLQAAVGAPPPPAAPESSTVPVQDDAHGRLEDDGVGHMSTSSGGSGLVLPAVAAHTKRIFLARHGQTDLNKLGVCQGRKLNPPLNEKGRSQARTLLIGVELDGVLCSPLRRARETAGIVRESHPLATSFAVSEDLNEVDFGGAEGLPQMVSAAILAPSYLAWSHGRLDKRAGVLGESG 228
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: D7FIE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE0_ECTSI) HSP 1 Score: 227 bits (578), Expect = 2.340e-66 Identity = 127/204 (62.25%), Postives = 142/204 (69.61%), Query Frame = 1
Query: 58 SRRALFSKVLRLGAAGGGVILARPSRVVAAGP-----------ASVALLRDKSGDTPGGGRGLPSVSYGGSELVLPPVGARTKRIFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTLLTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEGLPKLLAAAVLAPAYFAWSNGRLDKRAGRSGESG 636
+RR L S+ LGA G G LARP + P +SV + D G G S GGS LVLP V A TKRIFLARHGQTDLNKL VCQGR+LNPPLNE GR QARTLL LDAI+CSPLRRARETAGIV+ESHPL F+VS DLNEVDFGGAEGLP++ +AA+LAP+Y AWS+GRLDKRAG GESG
Sbjct: 10 TRRELVSRARLLGAVGVGATLARPLQAAVGAPPPQSPPAAPGFSSVLVRDDAHARLEDDGVGHISTPSGGSGLVLPAVAASTKRIFLARHGQTDLNKLGVCQGRKLNPPLNENGRRQARTLLIDVELDAILCSPLRRARETAGIVRESHPLATSFAVSEDLNEVDFGGAEGLPQMASAAILAPSYLAWSHGRLDKRAGVLGESG 213
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: A0A7S4JH75_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JH75_GUITH) HSP 1 Score: 105 bits (263), Expect = 1.940e-21 Identity = 64/137 (46.72%), Postives = 82/137 (59.85%), Query Frame = 1
Query: 232 GSELVLPPVGARTKRIFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTL---LTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEGLPKLLAAAVLAPAYFAWSNGRLDKRAGRSGES 633
G L LP +GA+TKR+ L RHG+T+LN+L QGRR+NPPLN +GR QA+ L L A+ S L RA ETA V++ H AR SV ADL+EVDFG +EG + ++ Y W G + RA GES
Sbjct: 110 GRALGLPAIGAKTKRLILCRHGETELNRLGKIQGRRMNPPLNPRGRRQAQELAAALCGVRTSAVFSSELERAIETADEVEKFH-AGARRSVLADLDEVDFGSSEGKSLESSRLRISATYARWIMGDEEARATPEGES 245
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: A0A3D4IG50_9BACT (Histidine phosphatase family protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3D4IG50_9BACT) HSP 1 Score: 76.6 bits (187), Expect = 2.030e-12 Identity = 43/90 (47.78%), Postives = 56/90 (62.22%), Query Frame = 1
Query: 277 IFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTL---LTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEG 537
I+L RHG+TDLN+ + QGR +N PLNE G QA L L++ LDA+ CSPL RA +TA V SHP ++ DL E+ +G EG
Sbjct: 4 IYLTRHGETDLNRAGIVQGRGVNAPLNENGLIQAEALRERLSNVWLDAVYCSPLLRAVQTAETVVRSHPYLNPRKMT-DLEEISWGICEG 92
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: A0A4V1J5U7_9FUNG (Phosphoglycerate mutase (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J5U7_9FUNG) HSP 1 Score: 75.1 bits (183), Expect = 5.370e-12 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 277 IFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTL---LTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEG--LPKL 549
++L RHG+TDLNKL V QG ++ PLN+ GR QA+ L S +D ++ S LRRA+ETAG +Q HP +F+ L+E+ +G EG PKL
Sbjct: 1 LYLCRHGETDLNKLNVLQGSGVDAPLNDTGREQAQRLGNRFRSQPVDWLISSDLRRAKETAGAIQCHHPAV-KFTTYPGLSEICWGIWEGRSCPKL 95
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: A0A4V1IRZ1_9FUNG (Putative phosphoglycerate mutase (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1IRZ1_9FUNG) HSP 1 Score: 72.8 bits (177), Expect = 4.400e-11 Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 1
Query: 250 PPVGARTKRIFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTL---LTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEGLPKLLAAAVLAPAYFAWSNGRLDKRAGRSGES 633
P ++ KR++L RHG+T+LN V QGR ++ LNE GR QA L + +D V S L+RA++TA IV+++HP + L E+ +G EG +LA +W +G+ D ++ SGES
Sbjct: 8 PTPTSKVKRLYLCRHGETELNANGVLQGRGVDQYLNETGRKQAELLRDRFANVPIDVFVSSRLKRAKQTAEIVKQNHPDAPLVEIEG-LAEISWGDWEGEKVPALNGLLA----SWEDGKYDAKS-PSGES 132
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: UPI00083FC35C (histidine phosphatase family protein n=1 Tax=Rhodohalobacter halophilus TaxID=1812810 RepID=UPI00083FC35C) HSP 1 Score: 72.4 bits (176), Expect = 6.590e-11 Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1
Query: 271 KRIFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTL---LTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEGLPKLLAAAVLAPAYFAWSNGRLDK 609
K++F+ARHG+TD NK + QGR ++ PLNE G QAR L L D +V S L+R+ +TA ++S L R D E+DFG EG+P A L W +G +D+
Sbjct: 4 KKLFIARHGETDYNKQGLLQGRGIDAPLNETGWDQARKLAGYLQQYPTDHLVSSSLKRSWQTAEPFRDSTGLDIRKDEGLD--EMDFGIYEGVPYTEAVGDLVALKEIWESGNIDE 117
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: UPI001BB1F0BB (phosphoglycerate mutase family protein n=1 Tax=Aliifodinibius saliphilus TaxID=1920650 RepID=UPI001BB1F0BB) HSP 1 Score: 68.6 bits (166), Expect = 1.570e-9 Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 277 IFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTLLT---STILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEGLP 543
I+LARHGQT+ N+L QGR ++ LN+ G QAR + T + L + S L+R+ ETA +V + H L + ADL+E+DFG EG P
Sbjct: 6 IYLARHGQTEYNRLNQIQGRGIDASLNDTGHRQARAIATCFENIKLHQLFSSSLKRSFETAQVVGDIHDLKPKSY--ADLDEMDFGPLEGRP 95
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: A0A2E7EPW2_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7EPW2_9PLAN) HSP 1 Score: 68.6 bits (166), Expect = 1.600e-9 Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 250 PPVGARTKRIFLARHGQTDLNKLE--VCQGRRLNPPLNEKGRSQARTL---LTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEG 537
P G T +L RHG TD N + QG ++ PL+++G QAR L+ +LDAI CSPL+RARETA IV H L+ + V ++++EVD G EG
Sbjct: 3 PSPGPDTCFCYLLRHGATDNNLANPPLLQGNSVDGPLSDEGVVQARAASAELSEQLLDAIYCSPLKRARETAEIVAAPHELSPQ--VVSEISEVDVGSWEG 101
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Match: A0A349ANF8_9CHLR (Alpha-ribazole phosphatase n=2 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A349ANF8_9CHLR) HSP 1 Score: 68.2 bits (165), Expect = 1.710e-9 Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 274 RIFLARHGQTDLNKLEVCQGRRLNPPLNEKGRSQARTL---LTSTILDAIVCSPLRRARETAGIVQESHPLTARFSVSADLNEVDFGGAEG 537
+++L RHGQT+LNK+ QGR ++ PLNE G QA+ L L+S LD I SPL RA++TA I++ +H + + +L E+ FG EG
Sbjct: 3 KLYLIRHGQTELNKVRRFQGR-IDVPLNETGIGQAQKLALRLSSEPLDKIYTSPLSRAQQTAEIIRSNHQID--IMTNEELVEMSFGSLEG 90 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig79.120.1 >prot_P-littoralis_Contig79.120.1 ID=prot_P-littoralis_Contig79.120.1|Name=mRNA_P-littoralis_Contig79.120.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=215bp RSTDEEQPAPPSPPPSSRTSRRALFSKVLRLGAAGGGVILARPSRVVAAGback to top mRNA from alignment at P-littoralis_Contig79:532452..535810- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig79.120.1 ID=mRNA_P-littoralis_Contig79.120.1|Name=mRNA_P-littoralis_Contig79.120.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3359bp|location=Sequence derived from alignment at P-littoralis_Contig79:532452..535810- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig79:532452..535810- >mRNA_P-littoralis_Contig79.120.1 ID=mRNA_P-littoralis_Contig79.120.1|Name=mRNA_P-littoralis_Contig79.120.1|organism=Pylaiella littoralis U1_48|type=CDS|length=645bp|location=Sequence derived from alignment at P-littoralis_Contig79:532452..535810- (Pylaiella littoralis U1_48)back to top |