mRNA_P-littoralis_Contig79.113.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig79.113.1 vs. uniprot
Match: D7FTP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP2_ECTSI) HSP 1 Score: 607 bits (1565), Expect = 7.950e-207 Identity = 336/472 (71.19%), Postives = 381/472 (80.72%), Query Frame = 1
Query: 16 IISWAELDPGEEREDVFDKLGHRVVVENSSDEEGXXXXXXXXXXXXXXTEIAALRRRRAYIIAQLHNVGQSIRETEAEVLVGQCLPEIPKRDLAPKDTVDESQTGSFLHAVDWRTGSDDGPGPKPLTDRAAERAGALLTLFDNDGDGCLSFDEFRAYLIRLGRDKGKLGERLTTNREFWLNYAMDQAGPAPASDIGGTVSFDGMSLTQSGFIGHRRMVERERPLELDLLAMGLDLLPECLQRWLKAKDAFDRIDAEGVSSAAARGESGDRTQEGCDGSIERGEAQLLLADAGEVMSKLRVEEELGLATMRAKLLLQLVEERRRRNRLANTQEFSRAAAFDSKRVYRSAWLSWFLSGRAKEEAETSWLEKGLIRMKMGLYRGFRTFCGMVGYPRRALESLAQQGLIS---------------------SNLLASCKGSDARATVRMAVGDAVDDGRGFSVSLNFLHKGNASTE 1368
+ WAEL+PGE R FD+LG+ ++ + XXXXXXXXXXXXXX IAALRRRRAYIIAQLHNVGQSIRETEAEVL G+C+PEI KRDLAP+DTVDES+TGSFLHAV+W G+DDGPGPKPLTDRA +RA ALL LFD DGDGCLSFDEFRAYL+RLGRDKGKLGERLTTNREFWL+Y DQAGP A+D+GG VSFDG LTQSGF+GHRRMVE + PLE+DLL MGLDLLPE LQRWL+ K+AFDRIDAEGVS+A RGE G +++ DGS++RGEAQLLLADAGEVMSKLRVEEEL LATM AKL+L++VEERR+RNRLA+TQ SR+A D++R+YR+AWLSWF+SGRAKEE ETSWLEK LIR+K LYRGFR +VG PRR LE L QQGLIS +NLLA KGSDARAT+R A+GDA DDG GFSVSLNFLHKGN E
Sbjct: 1 MAPWAELNPGEGR---FDQLGNSLLESSXXXXXXXXXXXXXXXXXXXXXXIAALRRRRAYIIAQLHNVGQSIRETEAEVLAGKCVPEISKRDLAPQDTVDESKTGSFLHAVNWSAGTDDGPGPKPLTDRAMDRARALLRLFDADGDGCLSFDEFRAYLVRLGRDKGKLGERLTTNREFWLSYVADQAGPPAAADVGGAVSFDGC-LTQSGFVGHRRMVEADHPLEVDLLTMGLDLLPESLQRWLRVKNAFDRIDAEGVSAATERGERGAKSRGDYDGSVDRGEAQLLLADAGEVMSKLRVEEELTLATMHAKLMLEVVEERRKRNRLAHTQALSRSAVNDAQRIYRTAWLSWFMSGRAKEERETSWLEKNLIRLKTRLYRGFRACYSLVGRPRRVLEELVQQGLISCTSLILNPTGRFDDVTLYGVAANLLAPFKGSDARATLRAAIGDAEDDGSGFSVSLNFLHKGNGVWE 468
BLAST of mRNA_P-littoralis_Contig79.113.1 vs. uniprot
Match: D7FTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP1_ECTSI) HSP 1 Score: 281 bits (719), Expect = 1.350e-83 Identity = 174/351 (49.57%), Postives = 205/351 (58.40%), Query Frame = 1
Query: 1711 QILESSRTILNDRLKVSLSAEGCFCGPLISRLMEETLAGMIGSAQQAAADSVEHDLDRVKRQARTQANAPGMPHPLVAPKRKIPGIV-----SGVGGGSSRACGGKNAPASSAXXXXXXXXXXXXXXXXSTSGRLRTDREKRFENSKAKRWLDRMWAFAAKLRGTKAFSLDLEAGSPLEFLDSSLARAYLPASWRSEEVFTTPGYAAAWFAAWKRSFLTQASSLGERAREHLQNRLRQEAAQEKAAAAADTDEGGRLAGLEAELARLGVSKALLAETMGEKEEETARRLRETKDEQMEEHADLEDALRACTKYLLGPRELRVQSGQNVLAVEMQGLDIFDALSTSTHGGGQ 2748
+ILES +L+DRLKVS+SAEGCFCGPL+S+L+EETLA MI + +QA ADS EHD+ RV+R+ARTQ NAPGM HPLV PKR++ G V +G+ GG S G K + +S T GRL T+R KRF+++K +WLDRMWAFAAKLRG KAF+LDLEA SPLEFL+SS ARA VSKALLAE MGEKEEET RRLRE KD+QMEE+A+LEDAL ACTKYLLGPRELR+QSG NVL E QGLDI DALS + H GG+
Sbjct: 4 EILESRTLVLDDRLKVSISAEGCFCGPLVSKLLEETLASMIDNVRQAVADSAEHDVGRVEREARTQKNAPGMRHPLVVPKRRVAGSVREGRGAGLPGGGSGGVGQKKSESSGGTSAEMAAIITP------TRGRLLTERGKRFQDTKTSKWLDRMWAFAAKLRGAKAFALDLEASSPLEFLESSWARAXXXXXXXXXXXXXXXXX----------------------------------------------XXXXXXXXXXXXXXXXXVSKALLAEAMGEKEEETVRRLREAKDKQMEEYAELEDALLACTKYLLGPRELRIQSGHNVLVAEFQGLDILDALSAARHPGGE 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig79.113.1 >prot_P-littoralis_Contig79.113.1 ID=prot_P-littoralis_Contig79.113.1|Name=mRNA_P-littoralis_Contig79.113.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=938bp SPKTPIISWAELDPGEEREDVFDKLGHRVVVENSSDEEGGRGEDEDGAPDback to top mRNA from alignment at P-littoralis_Contig79:505289..521580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig79.113.1 ID=mRNA_P-littoralis_Contig79.113.1|Name=mRNA_P-littoralis_Contig79.113.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=16292bp|location=Sequence derived from alignment at P-littoralis_Contig79:505289..521580- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig79:505289..521580- >mRNA_P-littoralis_Contig79.113.1 ID=mRNA_P-littoralis_Contig79.113.1|Name=mRNA_P-littoralis_Contig79.113.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2814bp|location=Sequence derived from alignment at P-littoralis_Contig79:505289..521580- (Pylaiella littoralis U1_48)back to top |