mRNA_P-littoralis_Contig79.61.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig79.61.1
Unique NamemRNA_P-littoralis_Contig79.61.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: A0A6H5L2F5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2F5_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 1.060e-140
Identity = 274/361 (75.90%), Postives = 291/361 (80.61%), Query Frame = 1 
Query:  121 MSSNGRRYP--IGRGSVSVISLLVALPKLLFLPSLTGAFFAPAGVLSSAERFSPPSASSSSPRGARKLQTSXXXXXXXXXXXXXXXXXXXXXXXXXXSWVFALSGGATGDSTTPTEGGEPGDSADDDAPLVSAPSGGDAGGEGVVEG--GAEAGEPVLVNVAKLESSAATSTLWNVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGAAVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAWPALSGK 1191
            MS NGRR P  + RGS+S+I+LL ALPKLL LP+L GAFFAP GVLSS+    P      S          XXXXXXXXXXXXXXXXXXXXXXXXXX        G T       EGG       D APL S+PS   A G+G   G  GAEAGEP LV+VAKLES+AAT TLWNVPN+LTMARV+AIP+FATIFY SLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMT+CSAIILCREL ISALREWMAQLGLRETVKVGNAGKWKTATQM+AI+MLLLLEPGAAVTLVNPAT MPIAK LLY+STVLTVTSGSGYLKAAWPAL GK
Sbjct:    1 MSFNGRRSPGSVSRGSISIITLLFALPKLLLLPTLAGAFFAPIGVLSSSAARIP------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGGT------AEGGSA-----DGAPLSSSPSLSAAEGDGKGGGVQGAEAGEPALVDVAKLESAAAT-TLWNVPNILTMARVMAIPVFATIFYASLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMTVCSAIILCRELAISALREWMAQLGLRETVKVGNAGKWKTATQMMAITMLLLLEPGAAVTLVNPATAMPIAKSLLYVSTVLTVTSGSGYLKAAWPALMGK 343
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: A0A835ZDG0_9STRA (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDG0_9STRA)

HSP 1 Score: 257 bits (656), Expect = 4.040e-77
Identity = 121/192 (63.02%), Postives = 153/192 (79.69%), Query Frame = 1 
Query:  616 TSTLWNVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGAAVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAWPALSGK 1191
            T TLWNVPN+LT+AR++ +PI   +FY  +  RNIWC+A+FAGAA TDWLDG+ AR+  I +PFG+FLDPVADKL+V+ A+ILLSERLG WMT+C++IILCRE+ +SALREWMAQ+G R  VKVG AGK KTA QM+A++ LLLL+P AA  ++ P  +    K L+  S VLTVTSG+GYL+AAWPAL GK
Sbjct:   41 TPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAF-DAGKWLMIFSAVLTVTSGTGYLQAAWPALMGK 231
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: A0A7S2V0D2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D2_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.920e-62
Identity = 118/196 (60.20%), Postives = 149/196 (76.02%), Query Frame = 1 
Query:  625 LWNVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMT-ICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGA----AVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAWPALSGK*T 1197
            LWN+PN+LTM RVVAIPIFA +FY  +P RN   +AIFA A+ TDWLDGY+AR+  I +PFG+FLDPVADKL+V++AL+LL+   G W+  + +AIIL RE+ +SALREWMA  G R  V+VG AGK KTA QM+++ +LLL + GA     V+L++PA     A  LLY+STVLTVTSG GYL+AAWPALSGK T
Sbjct:   27 LWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQMVSLILLLLAQKGADCPLPVSLLHPA-----ALALLYLSTVLTVTSGWGYLQAAWPALSGKET 217
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: A0A7S2UZN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 9.390e-61
Identity = 118/196 (60.20%), Postives = 149/196 (76.02%), Query Frame = 1 
Query:  625 LWNVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMT-ICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGA----AVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAWPALSGK*T 1197
            LWN+PN+LTM RVVAIPIFA +FY  +P RN   +AIFA A+ TDWLDGY+AR+  I +PFG+FLDPVADKL+V++AL+LL+   G W+  + +AIIL RE+ +SALREWMA  G R  V+VG AGK KTA QM+++ +LLL + GA     V+L++PA     A  LLY+STVLTVTSG GYL+AAWPALSGK T
Sbjct:  140 LWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQMVSLILLLLAQKGADCPLPVSLLHPA-----ALALLYLSTVLTVTSGWGYLQAAWPALSGKET 330
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: W7TJV8_9STRA (Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJV8_9STRA)

HSP 1 Score: 215 bits (547), Expect = 7.950e-60
Identity = 106/191 (55.50%), Postives = 143/191 (74.87%), Query Frame = 1 
Query:  622 TLWNVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLG-PWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGAAVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAWPALSGK 1191
            +LWN+PN+LT+ RV++IP+   I+YTS   RN  CS +F  AA TDWLDGY+ARR  + +P G+FLDPVADKL+V+TAL+L+++RL  P +T+ +AII+CRE+G+SALREWMA  G R+TV VG  GK+KTATQM+A+S+LL ++P  A         + +  GLL  S VLTV S  GY++AAWPAL+GK
Sbjct:  155 SLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGK 345
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: A0A831W802_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A831W802_9GAMM)

HSP 1 Score: 190 bits (483), Expect = 9.420e-53
Identity = 100/190 (52.63%), Postives = 136/190 (71.58%), Query Frame = 1 
Query:  625 LWNVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILL-SERLGPWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGAAVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAWPALSGK 1191
            +W++PN+LT +R++ IP+F  +FY   P  +   + +F  AAFTDWLDG++ARR G+V+P G+FLDPVADKL+V+TAL+LL ++   PWM I +A+I+ RE+ ISALREWMA+LG R TV V   GK+KTATQM AI++L+   P     L    TY  I + LLYI+ VLT+ S   YL+AAWP+LS K
Sbjct:    1 MWSIPNLLTFSRIIMIPVFIGLFYLPAPWNHQVAALVFMIAAFTDWLDGFLARRMGLVSPLGAFLDPVADKLMVATALVLLVADNPSPWMAISAAVIIGREITISALREWMAELGSRTTVAVSLIGKFKTATQMGAITLLIYRHP-----LFGLPTYR-IGEILLYIAVVLTLWSMMVYLRAAWPSLSDK 184
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: A0A370DFG8_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=6 Tax=Bacteria TaxID=2 RepID=A0A370DFG8_9GAMM)

HSP 1 Score: 184 bits (466), Expect = 2.750e-50
Identity = 98/190 (51.58%), Postives = 134/190 (70.53%), Query Frame = 1 
Query:  625 LWNVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSE-RLGPWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGAAVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAWPALSGK 1191
            +WN+PN+LT+ R+V IP+F  IFY  +    I C+A+FA AA TDWLDG++ARR G V+PFG+FLDPVADKL+V+ AL+LL +    PW+ + +AII+ RE+ ISALREWMA LG R  V V   GK+KTA QM+AI +LL+++       ++   ++     LLYIS +LT+ S   YL+AAWP+L GK
Sbjct:    1 MWNIPNLLTLLRIVLIPVFVLIFYLPVEWARIGCAAVFALAAVTDWLDGFLARRWGQVSPFGAFLDPVADKLMVAVALLLLVQSEPTPWLALPAAIIIGREITISALREWMAALGARAQVAVSVIGKFKTAAQMLAI-LLLIIQQDLWGLPIHTVGFV-----LLYISAILTLWSMVIYLRAAWPSLMGK 184
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: A0A7S4U8V2_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U8V2_GUITH)

HSP 1 Score: 184 bits (466), Expect = 3.220e-50
Identity = 98/186 (52.69%), Postives = 127/186 (68.28%), Query Frame = 1 
Query:  625 LWNVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLS---ERLGPWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGAAVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAW 1173
            LWN+PNVLTMARV+ IP+      +S P RN+  S IFA A+ TD +DGY+ARR  I + FG+FLDPVADKL+V+TAL+ LS    R+G  + + SAI +CRE+ +SALREWMAQ G R  V+VGN GKWKTA QM AI+ LL + P    + +    +  I   LL++ST+L V SG+ Y  AAW
Sbjct:   14 LWNLPNVLTMARVLMIPLMVAFLVSSYPGRNVVASVIFAVASLTDLVDGYLARRWKISSNFGAFLDPVADKLMVATALVFLSAGYSRVGGGVAVASAITICREIAVSALREWMAQEGKRAEVQVGNLGKWKTAIQMFAITGLLFVMPTGGASGLGILFWTSIL--LLWVSTLLAVISGADYFSAAW 197
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: UPI001A9F60D6 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=unclassified Pseudomonas TaxID=196821 RepID=UPI001A9F60D6)

HSP 1 Score: 182 bits (462), Expect = 7.880e-50
Identity = 97/186 (52.15%), Postives = 128/186 (68.82%), Query Frame = 1 
Query:  631 NVPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSE-RLGPWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLEPGAAVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAAWPALS 1185
            N+PN+LT+ RV+ IPIF  +FY+S P  ++  SA+FA AA TDWLDGY+ARR G  TPFG+FLDPVADKL+V+TAL+LL E     W+T+ + II+ RE+ +SALREWMA+LG R  V V N GKWKTA QM+A+ +LL   P           ++ +   LL ++ VLT+ S   YL AAWP L+
Sbjct:    2 NIPNLLTLLRVLLIPIFILLFYSSFPASHLVASAVFALAAATDWLDGYLARRLGQSTPFGAFLDPVADKLMVATALVLLVEAHANLWLTLPAVIIIGREIVVSALREWMAELGARAHVAVSNLGKWKTAAQMLALIILLANSP-------TMGFWVVVGYVLLIVAAVLTLWSMLHYLLAAWPHLN 180
[Close]
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Match: A0A7S2EJE7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJE7_TRICV)

HSP 1 Score: 183 bits (465), Expect = 1.030e-49
Identity = 103/195 (52.82%), Postives = 136/195 (69.74%), Query Frame = 1 
Query:  628 WN-VPNVLTMARVVAIPIFATIFYTSLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQMIAISMLLLLE-PGAAVTLVNPATYMPIA------KGLLYISTVLTVTSGSGYLKAAWPALSG 1188
            W+ VPNVLT  R  AIP+   +FYT+    ++   +IFA A+FTDWLDGY+ARR  I + FG+FLDPVADKL+VSTALILL+ R GP + + +++IL RE+ +SALREWMAQ GLR++VKVG  GK KTA  M+A+++LLL+  PG     V  A +  +A        LLY+S ++TVTSGS Y +AA P L G
Sbjct:   35 WHRVPNVLTYLRCFAIPLLVGLFYTTSEWGHVQTGSIFAVASFTDWLDGYLARRWDITSAFGAFLDPVADKLMVSTALILLAGRHGPAVAVPASVILAREIAVSALREWMAQRGLRDSVKVGFQGKVKTAATMVALTLLLLVPVPG-----VEGAKFAALAGLQQPGMALLYLSALVTVTSGSVYFRAAAPVLMG 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2F5_9PHAE1.060e-14075.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDG0_9STRA4.040e-7763.02CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A7S2V0D2_9STRA2.920e-6260.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UZN3_9STRA9.390e-6160.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TJV8_9STRA7.950e-6055.50Cdp-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A831W802_9GAMM9.420e-5352.63CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A370DFG8_9GAMM2.750e-5051.58CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A7S4U8V2_GUITH3.220e-5052.69Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
UPI001A9F60D67.880e-5052.15CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A7S2EJE7_TRICV1.030e-4952.82Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig79contigP-littoralis_Contig79:217421..230641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FID2
PFAMsCDP-OH_P_transf
Model size2213
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017,RC02795
KEGG koko:K00995
KEGG ReactionR01801
KEGG Pathwayko00564,ko01100,map00564,map01100
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006996,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009657,GO:0009668,GO:0009941,GO:0009987,GO:0010027,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030145,GO:0031967,GO:0031975,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0046872,GO:0046914,GO:0061024,GO:0071704,GO:0071840,GO:0090407,GO:1901576
Exons7
Evalue8.07e-145
EggNOG OGsCOG0558@1|root,KOG1617@2759|Eukaryota
Ec32 ortholog descriptionCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Ec32 orthologEc-11_001460.1
EC2.7.8.5
Descriptioncardiolipin synthase activity
Cds size1074
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig79.61.1prot_P-littoralis_Contig79.61.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig79 217541..229622 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791617.021571-UTR-P-littoralis_Contig79:217420..2175401680791617.021571-UTR-P-littoralis_Contig79:217420..217540Pylaiella littoralis U1_48UTRP-littoralis_Contig79 217421..217540 +
1680791617.1314456-UTR-P-littoralis_Contig79:229622..2306411680791617.1314456-UTR-P-littoralis_Contig79:229622..230641Pylaiella littoralis U1_48UTRP-littoralis_Contig79 229623..230641 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791617.035073-CDS-P-littoralis_Contig79:217540..2176171680791617.035073-CDS-P-littoralis_Contig79:217540..217617Pylaiella littoralis U1_48CDSP-littoralis_Contig79 217541..217617 +
1680791617.0467274-CDS-P-littoralis_Contig79:224149..2242671680791617.0467274-CDS-P-littoralis_Contig79:224149..224267Pylaiella littoralis U1_48CDSP-littoralis_Contig79 224150..224267 +
1680791617.0599415-CDS-P-littoralis_Contig79:225047..2254071680791617.0599415-CDS-P-littoralis_Contig79:225047..225407Pylaiella littoralis U1_48CDSP-littoralis_Contig79 225048..225407 +
1680791617.0749316-CDS-P-littoralis_Contig79:226663..2268251680791617.0749316-CDS-P-littoralis_Contig79:226663..226825Pylaiella littoralis U1_48CDSP-littoralis_Contig79 226664..226825 +
1680791617.085371-CDS-P-littoralis_Contig79:227851..2279441680791617.085371-CDS-P-littoralis_Contig79:227851..227944Pylaiella littoralis U1_48CDSP-littoralis_Contig79 227852..227944 +
1680791617.096779-CDS-P-littoralis_Contig79:228824..2289141680791617.096779-CDS-P-littoralis_Contig79:228824..228914Pylaiella littoralis U1_48CDSP-littoralis_Contig79 228825..228914 +
1680791617.115283-CDS-P-littoralis_Contig79:229448..2296221680791617.115283-CDS-P-littoralis_Contig79:229448..229622Pylaiella littoralis U1_48CDSP-littoralis_Contig79 229449..229622 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig79.61.1

>prot_P-littoralis_Contig79.61.1 ID=prot_P-littoralis_Contig79.61.1|Name=mRNA_P-littoralis_Contig79.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=358bp
MSSNGRRYPIGRGSVSVISLLVALPKLLFLPSLTGAFFAPAGVLSSAERF
SPPSASSSSPRGARKLQTSSLQSGHHRQQAHHSSTSSTSTSRGGGSWVFA
LSGGATGDSTTPTEGGEPGDSADDDAPLVSAPSGGDAGGEGVVEGGAEAG
EPVLVNVAKLESSAATSTLWNVPNVLTMARVVAIPIFATIFYTSLPRRNI
WCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLS
ERLGPWMTICSAIILCRELGISALREWMAQLGLRETVKVGNAGKWKTATQ
MIAISMLLLLEPGAAVTLVNPATYMPIAKGLLYISTVLTVTSGSGYLKAA
WPALSGK*
back to top

mRNA from alignment at P-littoralis_Contig79:217421..230641+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig79.61.1 ID=mRNA_P-littoralis_Contig79.61.1|Name=mRNA_P-littoralis_Contig79.61.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=13221bp|location=Sequence derived from alignment at P-littoralis_Contig79:217421..230641+ (Pylaiella littoralis U1_48)
CTTCCGTTGTGCCACTGCGGAGCGCTGGCACATTGTGCCGCAGTGCGGTA
TCGGGAGGTCTGTGACGTCAAGGCCTCGAGCACCCCTGCTGCTGCTCCCC
CTATTCCCTGGCCTACGGTGATGAGCTCCAACGGCAGACGGTATCCTATT
GGTCGCGGCTCGGTCTCAGTGATCTCGCTGCTTGTCGCCCTCCCCAAGTA
AGTTTCTTCCCTGATCCACCGCAATTTACCCACTCACCCGACACCTTCAG
CAGGCAGAGATGGCTCTCCTCTAAGACATAACCGACGAAAGCCATAACCG
ACGAACGGTCGGCTATTGCTTCTCGCGAAGAGAGTAGCATCGTGACCCTA
GCGCGCCACGCTAGACTCGACTTACGTTTTCGGTCACCTCCGGTCAAAAG
CAGTAGAGTTGGGGAAGACGCTTGTTCGGGAAGGTGTTTCGGGAGGGAGC
ACTTGTCCGCTGCTTATGTGCGTGTGCCGAATACGTATGGTTCAACAGAA
GCAGCAGCAGCAGCAGCAGCAGCAACCGCACGGCGCCTTCACACTTCCAC
GGAGCGCACACCGCGGATTGCGGCTCACGTCAAAACGGTTTTGGCATCGT
GTGACCGCGGAGAGGGTCGAGTTGCCAGTCCCCACCCTTTGCAATCAGGT
CCTTTCCTTCTCGAGAAGTATCAGATTGATGTGATACTCAATGATGCCGA
ACACACAGCAGCGGTGCAGCAGCAGGAGTGTGGGTACAAGCATCATATGT
CGATGGTGTGTGTCATGGGATATCACATCATATTTATCTCATACTCCGGA
GTATTTATCATGCGGATGACAGACAACACACACACACCTGAGCGGCGGAC
CGCCCCGCTGTTGCTATGTTTCGGTGTCAACAGCAGCAGTACAGCAGTAG
TCACCTTTTCGGCGCTCTCCCGTCTGTTGCTTCGGGTGCTATCGTAGATT
CTAGATTCCGAATCATTCCTGCACGTTCGATTCGTTCTTGTGGACTTTCG
TGCCGAGGATTAGACGTGTGACTGACTCTAATCTACAGCGGGAGTCAACC
CCGCAGTATGTACCGCACAGCAGCACGGCAGGCAGTACACCAGTTGAGAA
TCGTGCACACGATTACAGCAGTACCTGGTACGATAGTATGGTCTGGTTTT
GCGGCCCGACTCACCAGTGCGAAATTTGAAGGTGGAACTTGGTACTGCTG
TTCTGTGCGATTTCAGAATTATGATTGATTGTCGTCGCGGCAACGTTGTG
TTGTTGACCAAGAAGGTGCAGCCCTCACGACCGCGTCATTTTATGGTACG
AGGTAAATGAGTGCTTGGCCCGCATACCCTCTTGCCCACTAGGCCGATAT
CCGATATCCAAAGCCCGATACTCCTCAGACGAAGCAGTTTACTCAGTCTT
TGCAGGGAGAAGGAGGACGTTAGAAACGAAACGAAATATCATCTCGCACC
ATCCCAATCAACGTAAAATAGATTTTCAAAAAAATTGTTGGAGGCCTGAC
ACCGGCTGCTATGCGGACGAAATCTTCGCCCATATGCCAATCATTAAGCA
TTTTCCAACGAGCATTTGGTTTCACGTGGTACGGCGCAAGATGCTTCGAA
ACAATGCGGAACATTTCGAGATCGCCCGATCTCGTTTTTTTTTTAAATCT
TTGGTGAATTTTTCCAAACCCGGCAGTCTTCAATATGTTGTTCGAGGCGG
CGAGATTGCGGTTACACCGCTACGCGTCAGTCCACAATACCAGCCACTGC
GCCATGGACCCTGAACATGTGCAGTTCCTGGAGGGCTTGAAGTAACCCCA
CAGTCAATGTGTTGAAATGTGTCAACACGTTGACCACTGGTTTTTGGCGG
ACACGCGCCAGGCATGCAAAAAAAACGTTTGAGCAGCGACTCTTGAAAAA
CGTCATACGCGGCACGTGCGTTGCTTGAACCGAGACCCAGCAGTCCACAA
CACACCAGACTACACCACAGCAGCAGCCGCGTTCTCACTCCCCACGTCAC
CGTTTGACGTGAAACTTTCTCGGCTGTCATCTTTATTCACTGCTGCTGCT
GTCCGTGGGTGGCGGATTGAGTTCGAGGTGGGCTCATGTACCCGGCAGAG
GGAACCATCGTTCGTTTGCGAACTACATACCAACCGACAGTAGTCAGGGC
TTTTTTTTTGTTTTACTTTATAAATACCACGTTCGGTTGCCTGAAAAACT
GATTCTACAGCAGCAGCAGTAGCAACAGCAGAAGAACTGAGGTCCGATAC
ACAGCGATGCTGATGCTCACGACTGCTGTGGATTGAATAACCCCCATCTA
CTACTCAACGTCCCACCGATGTAGAGCAGTAAAGGGAAGTGACAGCCAAG
AGGTTTTCGCGTTGAGAGGTGGTCTAGGGATCGAGAAGGTGAGTGTGGTG
TAGTCTGATCTGCAGGAGGACAGCAGCAGTAGCTTGAACCTCTGCATGAT
AAACGGCTTGTCTCTTGGGAACACACTCACCACGTTGATTCATACAATCA
AAGAGACAGCCGCTTCTGAAATACGAAAATAGGCGCTTTTGCTTGTCTGG
CATGCTCCAACACATCAAGCGGCCAAGGCATATTACTGCAGTGACTCTTA
GGTTGTTCCAAACCCTTCGCGATGACGAGATCATTATGTTCAGGTTTCTG
GCGCGCAAGTGCTCGATAATGTCGTTGGTACGGCCACAGACCACCTCGAA
AAAATAATAAAGAGTAGAAGACGGGGGATAACGAGGAAATCAAGATTTAT
TCTCCGTACCACCCGGTGCGGAATCTTTCATGTGCGAAACAAATCTCCTC
CGAAACGCTCCTTGGCATTGTGGAGAAGATTAGCGTTCTCAAAAAAACTC
CCGTCCGCGTAGCAACCGGTGAGAAATGAGAGCGATTTTGTTCAACCATC
GTTTACTATCGCCCGTACTTTCAGCGAGACGCTCTCTGTCGTGCATCAGC
TGGAAATCTTGTTAGAAAACTCTTTTTTTTTTGTGCTATGTTCGCCAACG
CGAGCGGGTAAATCTAAAATTTATCGAGACGTGGTCTGCAGGTCCGGTGC
CGGGATAATATCTTACTTGTGAGGCGTGAGCGAGAGCAGTGCAAAGCTCG
CTCATATCTGCTGCACCAACATCAGCACACGAGGTTCTGAATCTTTCTTT
GTGTCGCGCGGTATAACAACTAGTTTGTTTGAGTCTTGGGATCTTTGACT
CCGCTACCACTTCCTATGCACAGTAGGTAGCGCAGCTAGCTGCTACTGCT
GCTGCTGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCCAGTC
AACGCTCGCTAATACAAGTACGCGCGCTTACATTGACGTGGGAGTTCAGA
TCTACTGTTGTCGGCTTGGTCGCGCTTGGCGGATGCGTAGTCGTAGGGTT
CGCGATATCACATGTCGCAGCTCACCAAGCGGTGTATATTTTCAATTATG
AGCGTCAACCATGAAGGAAGCAAAAGCGGGGTGTTTTTTCTACGATATTT
TGACGACAGATTCTTGTACGGCATACGACGCCTGAATTCACTGCTGTCAC
TACCTGAATCACCCCGCAAAACCTTAAAAGCGCAAACGCCGTTCTCGACC
ATCGCGGAACGCCAAAATGCGGGTGTACTTTGTGCGTCCATGCACGCTAG
ACACGCCTGCCGAATGTCGTTTTCCGTTCCACAGCGCCGCCGATTGTCGT
TCCGTTCCACGGCGGCACTCGAGAAAACCCTCGGCAGGTCATCTCGTCCG
TTACACATCACATATCATGATGTTCCCGAATCACATCATACGTGCATACT
TCGCAGCAGCATGTATACAGCAGTAGTTCAATATCCCGTCGGTGTCAAAC
CGGTGTCAAAGCCAGTGGTCTTCCGACGACCAAAGGATGGGGAACCTCTC
GCTAGCACACCTGTGAACTCACGCGCTTGGGGTGTATATCAAAACTTGCG
GCGGTGGCTTAGGATATTGTGGGTGTATGTACGTACGAGTTGTCTGTGTT
GGCTTGTGTGCCTCGAAGATGTGCCCTCAGGGGCACAGGAGTATCACTGA
AGCAGTAGTAGGTTGAAGAGATCGGGCCTGCCTCGTCCAGCAAAAGCTGT
GCACACACCTATCTGTGAAGAGACTCGTGGCTGCTTTTGACTGACTCTTC
TCTCCCCTCGCTCCATCCACACAAGATGCATATCATATCATGCTACAGTA
CTGCTGTTCTTGGTAAGTAAAAACCCGTGCAGCCGCATGTTTGTTTCTGC
GTGCTTTCGCTCTTCCGTGGTCGTTTCTTCTGCATGAAACATCGGCCTCC
ACGTTTTGTCGCTACGCAGCTTGTCAGCTCGAATGCCGTTTTCGACCATC
ATCGGGGCACGCCTCAACGGTAAAATCGCGGGTGTATCCGTGCGTCCACG
CACGTTCGACGTTCCCGCAGAATATGCGTCGAATCCAGGGCGAGCCATTC
GAGGAAGCCCTCAACGGGGTCATCTCGCCCAGTCGCCACAGATATCATCA
CCATCATCATGGATGTTCGAATCATGCATGCGTCGTTCAATATCCCGTTC
GGCAATATATGCATTTCTTCCAGATTCCCCGGAACCTCTCGCTTACATAC
ATGGGTACCCGTCAACTCACACGCCTGGGCATACTGCTGTTTAGGATTTT
ATCTGGTACGTGTGCATGTGTGTACAGCAGCAGTATGCGAACAAGAAAAC
ACCCTCCCGCGTGCTTTTTGCGTCAAGGAACCACCCACCATGACCAACCC
ACAGCAAGCACCGGTAGTAATCGTGTGATAGCTGATTAGGACCATATATA
TATACCGGCATTTACTTCGAAGTATATATTTTTACATAATATACCCCCAC
ACACACACATGCCCTAGAAACGCACCACCACTCACGCCAGCAGTTGCTCA
CCGGGGTCCCGCCGTGCGAACATCATACCAGTACATGACTGCTGTGGTTT
CGTTGATTTTGAACGAACGAACGAGAAGGATCGACACGATCGGTCTGCTT
CGTCTAGAGACCACCCGCACCAACCCTACGCGGAAGTATGTGGCAGTGTG
GGTGTTGAGCTGTAGCCTCGCAAACCTCGTTGTTGTTCTTGTCGTCCTCC
GAACACGACACCACCTGTATACCTCTCCACACACCCACGGGACAACTCCG
CTCGATTCAAGATCTGCGTCTTCGCTGCCAGACACTCCCCCTGCATATCG
CAGCGGCACCAGTAGTAGATTTTGACTGCAGTACCCACGAGTAGTAGCAG
CTAGCAGTGGAAATGCCGGAAGAAAGAAAGTTTCCGTGCGTTGTGGTTGC
TCGCCCAGCTCTTCGTTCCGCGAGAGTGACTGAGAAGGATAAGATTCATA
TGAGCCCGGGGCCCACCCCCAGTCTCTTGTATGCTTGGCATAATACGAGA
CCACACGTACATGTCGCAAATGATGCGTATGGCTTTGGATCTTGAGAGGA
GTTCGGATAGGCGTCGGCGGCCATGCTGTTCTTGCTTTGGTATTGTTCGT
GCGCTGAAGCATGCACGCTCGCACACACGGGCAGCAGCAGAAGAAGCAGG
AGCAAGCCACGGGCTTTCAAGGCTCACGGGGGTGTGGCATGCGTGTGTGC
GTGTCAGGTGTGTGCCGGGCAATCGCGGCTGAAACGCACAGATCGGAGCA
ACTATGAAGAATACCGGGCATTTGAATGTTTCGTTGCTTGCTGCTTCGAT
TGAGGGTTGCAGCTTCCGGGTGGGCGCGACGTGCTGCCGGACGACTGCGC
CAGAGTACAGGGAGGGCCTCAAGAGATCGAAAAGAAAGACAGCAGTATTT
AATAAACCTACACCAGCACTACTGACTGTAGCTGCACTGCTGTCGTACAG
GGCTATGATACTCGTACAACAGTACAGAGTTCTGTTTCATCCATGTTCGG
GGTGTCGACGCCCTGCCACGCGCAAGACGTCGACAAGCTTGGAAAACGGC
GCAAGCGCAGGGAACTGGAATGTCTCGCACAGATGTACCGCAGGGAACTG
GAATGTCTCGCACAGATGTACCGGTATGACATCATACATACAACACGGGG
AAGTCAAGCTTGTTCACCTTGTCCGCTGCCTGTAGATTTTTCTATGATTC
GAACAACCACTTTTAATTTTAATTTTTCTCAAAATAATGTAAATACAATT
AAAATTGTAAAAAAGACACTCACGCTTTTCTTCTAGCGAGATTGTACACA
TGCAGCTTCGTTGTGAGGTGCTTTCCGAAGTTCTCACTCCTGGGGCTAGG
CGCCGCTGAGACACTGGGGTCGAGGTCGTGACCCCTGGGGCGAGCCAGGT
GCAGCTCGTTAGCTGCATCCAGCAAGCAGCACTCGTGTAGCCGTGAAGCG
GCGCCAGCTCGCGTCGGTCCCCGTGTGGAGAGACCAGTCGATGGAATGAG
CAGGGTCGATTGAGCTCCCGGTAAATCGGCGGGTTACCGTACCCTACCCG
CACCCATCACATGCGCAGATGGCCAATCAACAATCGCTCAATTTTGAGGC
AGGCTACTGCTCCAGCTGTGCCGAAGGGTGTTTGCCTCGCTACCATACTC
ATACGCGTTGGATTTCTATTCTACACGCGTCGGAGTAGCCGAACGATCCA
CCAATATAAATTTTACCCGGCCGTGTCTCTTTCTTTCGTGTGTGTGTGTT
TGTGTGTGTGCGTACTTGCCTCTTGTCTTTGGTTTCTGTGTTTCATGGGG
GGGGGGGTTCCTTGTTGTCGTGGAGACAGGCTCCTGTTTTTGCCTAGTCT
CACGGGAGCATTTTTTGCACCGGCAGGGGTGCTGTCCTCGGCCGAGAGGT
TCTCTCCTCCGTCGGCATCTTCTTCTTCTCCAAGGGGAGCACGAAAGGCA
AGAATTTGGCGGGATGACGCTGAGCGTGGTTTGTCGATCCGCCTCGGTTG
TTGCAGGTTGTCATTCGTTTGTCTGGCGTGAATGTGTGTGTGTGTGTGTG
TGTACCCCAGGGGTGGTGGCATGGTTTGTGTGAGACACATGTGTATATAG
CACTCGCACACGACTCCGGTGAACGGCTAGCTCTCTCCTCAAGAACCCAA
GCACCCTATCCCCCCATCCCCCCATTTTGTCACCACAATCTTCCCTCCTC
GTCGCCAAAACCCGGAACGTACAGTGTTGACGCCACGCTTTTGCCCTGCG
ATACGACCAACAAAATTTTTATTTGTCGAACTTGGCGTAGCGCCTAAAGG
TAGCTCTGAACGGGTCTAGGCCAGGCCCTTGGGGAAGGAAGACCGCGAAG
GAGTATACATGGCGTCATACGGGGCCAATGTGGTGGGGGGGGGGGGGGGT
GATTGAAATTTTCGATTTCGTTCGGTCGAGACTAGGAGTTAGCTGCCCCT
GAGTTTTGACCTTGCTCTTGGTCGGGCGAAGTAAAAAAGTTCGATGACCT
CAAAGAGCGCACTTGTAGGGCGGTGACCTGTAGTGTGCCTTTTGCGAGCG
TACCTGGCGCAACAGCGGCTTTGTTTTGAGGCGGAAACGATCGGTGGGTT
GATTGGACCGGTCGCCGTGGATGGGTACCGGCGGAAGAGCGGTTGTTGTG
CTGCAAGTTTTACTTTCCTTGGCTCGTGACAACCAAGTCATCCCCCCCCC
CTCCCCTCGCCTCCGCTACCACGACAGCTACAAACTTCTTCGTTGCAAAG
CGGCCATCATCGTCAACAAGCTCACCACAGCAGCACCAGCAGCACCAGCA
CCAGCCGCGGCGGCGGCAGCTGGGTTTTCGCTTTATCCGGGGGCGCCACC
GGCGACAGCACGACTCCAACCGAGGGGGGTGAGCCAGGGGATTCCGCAGA
TGACGACGCCCCGCTGGTGTCAGCTCCGTCGGGGGGCGACGCCGGTGGCG
AGGGGGTGGTGGAGGGCGGGGCGGAGGCGGGGGAGCCCGTGCTTGTGAAC
GTGGCGAAGCTGGAGTCATCGGCAGCGACATCGACGCTGTGGAATGTGCC
CAACGTGCTGACCATGGCCAGGGTTGTGGCCATTCCGGTGAGGGAGATAA
TCAAAGACACAGACGACAGACGGACAGACAGACAGACAGACAGACAGAGT
CAGCCAGGTTTCTTTCATTGTACACGCATACCTTCCCAGTGTTTACGTGT
TCTTCCAATCACACGGCTCGGCCTAACAAAAGTCCACACGGAAAACAAAT
GATGCTAGAACGGCAGGGTCGAGTGCACTTCATAACCACGTGTGGTTTGA
AAATTCTACTTTGCTGCAAGCAATCGTACCATCATATGGCGCACAAAATG
GTTGAAACGGGAATGCCGGTCTAAATCACGGGCTGACGCAGCTTTGGATG
CGCGCTAATTTTATCGTCGACCGTGTGTCGAAATCTGAATGTTGTGAGGG
GGGGGGGGGGGGGGGGGGGGGCAAAATTCGCTGATACTGACCATCGTGGT
CAAGGGACAGAAACAACCACACAACTGTTAGACGCCGAGGGAGAACGAGT
CCCATGTGACGCTGAAGAATCAGGAGTTTTCGTTGAAATCAATCCAGGGT
GTCCGGGTGTTGGATGCATGGCGCTTTATCTTCGCCCCGTCGTGAGAGGG
AGTGTCTTGCAGCCGAAGGTGCATCCGTTCCGCCCTTGGCCTCGAGCGCG
CCACTGCTACATACTTCGAAGTACGTACGTGTGGTAGGATAGCCCATCTT
CAGGGAGCGAACTTTTCTTTTCTTTTTCGAGCGGTGGTTTGTCCGTGTGT
CTTTCGGCAAAACCTAAACGCCACGCCTTCATTCCAATCTTTTTTTTGTA
AAATCTCTCCGTTATGAGTGACAAAAAAAAAGGGGGTCTATCTGCATCTG
TCTTGGACGGTCGTTCGTCGGAGTGTGTGCATACCCTCACGACATGAAAG
CAGGTCACATCATATCCTTGCCAAATTTGTGTTCATTTAGCGCGCGTTGA
AAGAAAAAAAAAACCTCCTGTGTTGACTTCCTACTTGTGTGACCCCGATT
GGAGCGTCTACCTACCCGAAAGGTGTAGAGTGGCGCTCAATTAAAGGGAT
GACAACACAACACACACACACACTGCTCTCAACTATTTTTGTTGGGGGTT
GGCATTTCTTTCAGTCGGTCTCCTGCCTTGACAAGAAGCGCGCGGGACCA
CTCGACCAATCACGATACGATAGCTACGGTTTTTGCCATGCAAACGTTGT
CGTCGCGTTGTCTCTCAACTTCTCCTCGCGGTTAACCCCCCTCATTTCCC
CCCCTGATCTCCCTATCTCCTCTTTCTCTCAACCCGCTCCCAGATTTTTG
CAACCATTTTTTACACCTCGCTTCCCCGGCGCAACATCTGGTGCTCGGCA
ATATTTGCCGGAGCGGCGTTTACAGACTGGCTCGACGGGTACATCGCGCG
CAGGCAGGGCATCGTCACGCCGTTCGGCTCCTTTCTCGACCCCGTCGCTG
ACAAGGTACACTCTAATGTATTCTAACGAAGTTTTCTTTCTTTTTTTTCT
CTCGGATATGATGCACTTATTTTTTGCTTTTCGTCGTCGGAATGTTTTTT
TTCGTGTTGTCGAGGGGGGGCTGGGGGGGGGGTGACTTGTCTTGTTTTCT
GTGATTGATGACGTTGTTTGTTTGTGCACCGCTGTATCCGCACGGGAAGA
AGCGGGTTCGCAAAACGCGCACGTGCCTCGTACACGCACACGTTCACGCT
CACACACTTACACACACACACACACATGCATGCACGCACGCACCCACGCA
CACCGTACAGCAATCGCTATGGAGCCGTGAAAGTCATGTCCATCCGGGCA
ATGCGGTTCTATCCATCGCAATGAAGTATTGTATTTTCCCAATGAATGGG
GGCAGACGCTCTTGTGTGTTGTAGGGGGGGGCGTTCGTCTGGCGTGTGTG
CAAACAGGAGACAAATTTGTTGTTGTTTTTCGGGCTTTTGCGCTCACCCC
CTGACTGGTTGTGCGTTACGTATGATAGCACGCACACACAACGCGCACAC
GGACATGGGTATGGCTGCTGTTGTAGCGGGTTCCTATCGGATGGACATTT
GAGCAACAGCCCTTCTTCCTCCTCCTCCGCAACATGGAAGAAGGAAGCAT
GTGGGCACTTGCTTCGCCTTGACCTTGTGCGGCGCTGAACGGTACCGTGC
AGCAGTGGTGTGCTCCTCCTTCCGCAGGGCTATCGAAATTGAAGAGCTTC
GGCGCCCTCCTTGCTTTCCCCGCCGCGTGCATCCTGTTGCTTGCCACGAA
AAACTTTCGTTTCGTTTTGTTGCTCAGAAAGTCGGTTTGTTTTGCGTGGC
GGCGCTGACGTGAAAGCTTCTGGGCCTCACGGCGGAGATACGGCATTTTC
TCAACCTGTGGATATAGAGTGCGAACATACCACCGCAGCCAATTGTCTCG
CGCCATTGAACGTGTGTTTGTGCATCTACCGGTGTCCACCCGTATTATTT
TTTTTCCCTTGTCTTTGCCGACCCTTCGAAGCTCTTGGTGTCAACGGCGT
TGATACTCCTCTCGGAGCGGCTAGGCCCTTGGATGACGATCTGCTCCGCC
ATCATCCTCTGCAGAGAACTCGGGGTGAGCTATCGTACAGAGTCGCAGGG
TTGCTCGTCCCGTCGACTCCAAATCTGTTTGCATGTTTGTTTCCAGGGTG
GGCGTCTGCCGTGTTGGGGGTTTGGCGGGGGCTAGGAGGATGCGTGTAAC
ACCAGGCGTTGGCGTTTTTCATTCGTGTGTGTTCATTGTGGTAGGTGTTG
GCCCTTCTCTATGCGCTCCCGGCAATTATACGTGCTTAACGTTCCAGTGC
AGGTACGTACGTGGCGTGCGTTGTCGACGGGCGCCTCTTGAAGTGTGGTT
TGTGTGAGGCTGTTCATTGATTTGTCGTTGAAGGTTCTCCCTGGTTTATT
CCGCTCTGCAATACATCAGCACCGTGCAACGCAGAAGCAGGAACCTTGTT
CCCTGCCGAGCTCCCGTTTCCTGGGGTTATTTTCTTGCCGGCTGCTATGT
CCGATCAACGTGCGCCTGTCGGGTGCTTCACCTTGACCTTCGTGAGGCCA
CTTGGTTGATTTGACGGGCCTTGTCTAAATTGCCCTATGGGGGGAGGTGA
TGTGTGTCAGTTTGGGAGAAATATTTCGTTTTTTGTGCCCCTTGTTTTTG
CCGTAAAATCCCCCTCTTAAGTATGACATGGAGCAGCGAAATCACGTCGC
ACCACGCCAGATACTTGTCCTCAAGACTGCGCATGCTTGTCTCGCATGCT
TTCGGATATGCATGTCCCCTCTCGATTTCTTTTTTCTTACCCACGGGCCG
TTTCTGTTTCGGCGGGGGTACGATACTCGCATGATTCCACAAGTGCTCTA
CAGAAGCAGGTAAACGTATGTCACATGCTTGCTGGCTGGATGACGCATCT
TTCCCTCTTTTTTTTTGGTCGCTGTGTTATTTCATTTCATTTTCGGATTT
TCAGATCAGCGCTCTCCGTGAGTGGATGGCGCAGCTGGGGTTGAGAGAGA
CTGTCAAGGTCGGGAACGCCGGAAAGTGGAAAACCGCTACACAGGTACTA
GAAGCACATCATTTACTGTGCTCGCTTTTTTTACGACCCTTTTCTATCTT
TCTCGTGGACGCCACCGCTCTTATGATATCCTTGAGTGCGGCGTGCCGTT
GGCGGCGATTGAAACCTTGACCGTGTTCTTGCTGAGCGCCAGCCACCGCG
ATGGTGACCGTGGAGATATTTTTCACGAGCTTTGCTTCACCTGCTCGTTT
TTGGTTGACGAATGTCGTACAATTTCCCCATGGCTGCTTTTTCCCGCACC
GTTCTTTGGATGGACTTGTTCCTTGGGGCGACGCGTGTCGAGCTGTACTT
TTCTTTGATTTTGTTTTTTTTTCTTTCCAGGTATTTGAGCCTGTTTTACC
AGGGGTAACGTCCCGCCCATGTCTTGTGAAAACCTTTGTTGCACGCATCG
TGATGCCACGCTGCGATAGCTTTTTTATCATTTCTTAAAAGGTGGAAACG
AAACACCCGTGCCGCGTTCTTCCTGTGTGTATGTGTGTGTGTTTGTTTGT
GCTCTCTTCGTGCCTTTCTGATGCACAGATGATCGCCATAAGCATGCTGC
TGCTCTTGGAGCCCGGCGCCGCCGTCACGCTCGTCAACCCCGCCACCTAC
ATGCCGATCGCCAAGGGCTTGCTCTACATCTCGACAGTCTTGACGGTGAC
CTCCGGGAGCGGCTACCTCAAGGCAGCGTGGCCGGCGCTGTCGGGCAAAT
AGACCTAGAAAACAAAGTGCTCGTATTTTTGTGTTTTATGTGTGTGTGCG
CGTGTACGTGCGTGCTTGTGTGTGCGGGTGGTGGGTGTTTTATGTGCCAG
ATATAGCATGTGTGGGTGACTGCTGTGCTGTCGGTTTTAGCGGTCGCTTC
TGTTTCTCCGGCTACTGTATCACACTGCCGTAGTCCGCCGCAAAAGTAAG
AGCAGAGACTGGAGGCGGCGATCATCAGCAGGAGGATCAATTGTGCTCAA
CCTACGCGTACCTGTGCGTGAGATGTATTAGTCGTACATACTTCGAAAGA
ACAAAGCTGTAGTGGTCGGCCTGTGTTTTGTCAATCGGTCCTCGCAACGG
GTACGCAGATGTACGTACAGCAGCAGTATAGTAGTAATAATACGCCTCGG
GAGGAGAGGCAAGCACAAACACACACACCCGGGTCCAAAACGTGTGGAGC
TTTTCTGTTTTTTTTCTTCTTTTTTTCTTGGATGTGACCTAGGGGAGGGA
GAAAGCAAGAGTCACGCTGCGTGCAATGTTGAGTGCTCTACTATTGCTGT
GGGCGCGGGCGGTGGAGCTTTGAATCAGAGAGACAAAAAAATATACGCGG
TCCCGGGGAAAGCGGGCATCATAGCAAAACATCAAGGAGGGGCGGTCATC
CTCTCGTCCGAGACGGTGGGAGGGCGTCTTTTTCTCCCTGTTGAGAGTTC
ACCCCTGAGTGGTTCAGCGGGTGACCACAAAACTCTCGGTCAGCTGGGTT
GGGGGTTCCATTGTTGGGACAGCTTCGATTTTTTTTCTCGCATGGCTTTA
TTTCATCATGAGCAGTGGAAATAAACGACTCTATAGAGAGAAGAGACAGT
CGCGCCCTCATCTCCTCTCGTGCTTCTCTGTTGTAGAAATGAAAGCTGTG
AAAAGTACGGAGAGCACGTGAAAAATATGTGTATCCTATTTTTTTAGCCC
AGCTACAGGTTGGTCTACGCAAGAAACACCAAATTTAGTCAACACACCGT
CCCGAACGCAATAAACCACCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig79:217421..230641+

>mRNA_P-littoralis_Contig79.61.1 ID=mRNA_P-littoralis_Contig79.61.1|Name=mRNA_P-littoralis_Contig79.61.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1074bp|location=Sequence derived from alignment at P-littoralis_Contig79:217421..230641+ (Pylaiella littoralis U1_48)
ATGAGCTCCAACGGCAGACGGTATCCTATTGGTCGCGGCTCGGTCTCAGT
GATCTCGCTGCTTGTCGCCCTCCCCAAGCTCCTGTTTTTGCCTAGTCTCA
CGGGAGCATTTTTTGCACCGGCAGGGGTGCTGTCCTCGGCCGAGAGGTTC
TCTCCTCCGTCGGCATCTTCTTCTTCTCCAAGGGGAGCACGAAAGCTACA
AACTTCTTCGTTGCAAAGCGGCCATCATCGTCAACAAGCTCACCACAGCA
GCACCAGCAGCACCAGCACCAGCCGCGGCGGCGGCAGCTGGGTTTTCGCT
TTATCCGGGGGCGCCACCGGCGACAGCACGACTCCAACCGAGGGGGGTGA
GCCAGGGGATTCCGCAGATGACGACGCCCCGCTGGTGTCAGCTCCGTCGG
GGGGCGACGCCGGTGGCGAGGGGGTGGTGGAGGGCGGGGCGGAGGCGGGG
GAGCCCGTGCTTGTGAACGTGGCGAAGCTGGAGTCATCGGCAGCGACATC
GACGCTGTGGAATGTGCCCAACGTGCTGACCATGGCCAGGGTTGTGGCCA
TTCCGATTTTTGCAACCATTTTTTACACCTCGCTTCCCCGGCGCAACATC
TGGTGCTCGGCAATATTTGCCGGAGCGGCGTTTACAGACTGGCTCGACGG
GTACATCGCGCGCAGGCAGGGCATCGTCACGCCGTTCGGCTCCTTTCTCG
ACCCCGTCGCTGACAAGCTCTTGGTGTCAACGGCGTTGATACTCCTCTCG
GAGCGGCTAGGCCCTTGGATGACGATCTGCTCCGCCATCATCCTCTGCAG
AGAACTCGGGATCAGCGCTCTCCGTGAGTGGATGGCGCAGCTGGGGTTGA
GAGAGACTGTCAAGGTCGGGAACGCCGGAAAGTGGAAAACCGCTACACAG
ATGATCGCCATAAGCATGCTGCTGCTCTTGGAGCCCGGCGCCGCCGTCAC
GCTCGTCAACCCCGCCACCTACATGCCGATCGCCAAGGGCTTGCTCTACA
TCTCGACAGTCTTGACGGTGACCTCCGGGAGCGGCTACCTCAAGGCAGCG
TGGCCGGCGCTGTCGGGCAAATAG
back to top