prot_P-littoralis_Contig79.54.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig79.54.1
Unique Name	prot_P-littoralis_Contig79.54.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	354

Homology

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BLAST of mRNA_P-littoralis_Contig79.54.1 vs. uniprot
Match: A0A6H5KZV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZV2_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 2.510e-25
Identity = 89/217 (41.01%), Postives = 111/217 (51.15%), Query Frame = 0

Query:   78 MRLEKTRRGERLEILSLEQACKAEEISTLHAQEITADLDAKSQVLEGLAADAAEDAXXXXXXXTTSVAPFKNQQVAD--------GSDGHNTC-----SRVEGSATLLAALNEMPSHEGKRKQLSSMLQHTEHQTRSEIAEAARPAAELR----------------------------------RSARKRDAERLDLEHETTALRNGLGELAEENEI 247
            M+LE+ RR ERLE+      CKA E++ L AQE  ADLDAKSQ+LE LA D AEDA       +       +Q            G+ G N       +R EG A L+AAL+E+P+HE KR+ L+S+LQ TE QTRSEIA+AAR AA  R                                  R A++RDAERL LE ET  LR  L E+  E E+
Sbjct:    1 MKLERIRRSERLEV------CKAVEVAMLQAQEEGADLDAKSQILENLAEDEAEDAAAGNHGASFPAPSGTHQDALSACSLPDTGGNIGSNEGKPKPPARCEGFADLVAALSEVPAHENKRQHLASILQQTEDQTRSEIADAARLAAGFRQDKSEFHSFIEYAPWLEISQTCVLLNRVPCGGTMRMAKQRDAERLPLERETAILRQELAEMTSEEEV 211

[Close]

BLAST of mRNA_P-littoralis_Contig79.54.1 vs. uniprot
Match: D7FID0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID0_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 7.320e-24
Identity = 84/189 (44.44%), Postives = 99/189 (52.38%), Query Frame = 0

Query:   58 SCWRRVDELEDEEASLNHQFMRLEKTRRGERLEILSLEQACKAEEISTLHAQEITADLDAKSQVLEGLAADAAEDAXXXXXXXTTSVAPFKNQQVADGSDGHNTCSRVEGSATLLAALNEMPSHEGKRKQLSSMLQHTEHQTRSEIAEAARPAAELRRSARKRDAERLDLEHETTALRNGLGELAEENE 246
            SCWRRV ELEDEEASLNH+ MRLEK RRGERLEIL LEQ C+A E++ L AQ+  A LDAKSQ+LE LA D AEDA       +   +   +      S   ++  RV              S+EGK                      A P    RR A++RDAERL LE ET  LR  L E+  E E
Sbjct:  357 SCWRRVGELEDEEASLNHRLMRLEKIRRGERLEILGLEQVCQAAEVAMLQAQDEGAHLDAKSQILENLAEDEAEDAAAGNHGASFPASSGTHHDALPASSLPDSGGRVG-------------SNEGK----------------------AEPPT--RRMAKQRDAERLPLERETAILRQELAEMTSEEE 508

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig79.54.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig79.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KZV2_9PHAE	2.510e-25	41.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FID0_ECTSI	7.320e-24	44.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 287..307
None	No IPR available	COILS	Coil	Coil	coord: 63..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..354

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig79	contig	P-littoralis_Contig79:203502..209861 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig79.54.1	mRNA_P-littoralis_Contig79.54.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig79 203351..209861 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig79.54.1 ID=prot_P-littoralis_Contig79.54.1|Name=mRNA_P-littoralis_Contig79.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=354bp
MDMVEFHLSYASSSQNNDEQQQQQQSDQNSAGSGAKTTPAVASSLSQRIE
LLDSETRSCWRRVDELEDEEASLNHQFMRLEKTRRGERLEILSLEQACKA
EEISTLHAQEITADLDAKSQVLEGLAADAAEDAAAAAAEDTTSVAPFKNQ
QVADGSDGHNTCSRVEGSATLLAALNEMPSHEGKRKQLSSMLQHTEHQTR
SEIAEAARPAAELRRSARKRDAERLDLEHETTALRNGLGELAEENEIQAR
MDRAIQIGKGLERRLKHASSKLASVRDSLAQGPAKHMEEEEQQSLQLMQG
IAEAKARLRSRQNVSEASPWTGSTNRGRGGRALSLTPALSQSRLQMQYSR
GGVR